Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09]
3,088,511 sequences; 2,785,377,831 total letters
Query= NC_019705.1
Length=38759
Score E
Sequences producing significant alignments: (Bits) Value
seq3088379 1086 0.0
seq3087926 156 1e-33
seq3087822 116 9e-22
seq3088451 100 7e-17
seq3088057 91.5 4e-14
seq2884985 87.8 4e-13
seq347631 80.6 6e-11
>seq3088379
Length=10556
Score = 1086 bits (1204), Expect = 0.0
Identities = 2155/3172 (68%), Gaps = 56/3172 (2%)
Strand=Plus/Plus
Query 1973 TCGACGACTTCATTTTCCGACCGCTGAGCATGTGATGGAAGAACCTAAATACACGATTGA 2032
||||||||||| | | | ||||| ||||||||| |||| ||| | | |||| || ||
Sbjct 2099 TCGACGACTTCCTCTCCAGACCGATGAGCATGTAATGGCAGATACCGACTACAGCATCGA 2158
Query 2033 CCTGCGAACCAATAACGGCTGGTGGGCAAGGCTGCAGTCCTGGTTTGTCGGCGGGCGTTT 2092
|||||| || | | ||||| | || | || ||||||||||| || |
Sbjct 2159 CCTGCGCACGCGCAGTCCATTCTGGGCGCGTATGGCGAGCTTCTTTGTCGGCGGCCGCCT 2218
Query 2093 AGTCACCCCAAATCAGGGCTCACAGACGGGGCCTGTTTCGGCCCACGGACACCTGGGCGA 2152
||||| || | | || |||||||| || || || || ||||| || |||| ||
Sbjct 2219 GGTCACACCTGAAAAAGGTTCACAGACAGGCCCAGTATCAGCCCAGGGTGTAGTGGGTGA 2278
Query 2153 TTCATCCATTAACGATGAACGGATACTGCAAATTTCGACTGTGTGGCGCT-GCGTGAGCC 2211
||| | | |||||||| || || || || |||| |||| |||| ||||| | |
Sbjct 2279 TTCGGTCGTAAACGATGAGCGCTCGCTCCAGATCGCGACCGTGTT-CGCTTGCGTGCGGC 2337
Query 2212 TGATTTCAACGCTCACGGCATGCTTACCGCTTGATGTCTTCGAAAC-AGACCAGAATGAC 2270
| || || | | || || ||| | || || || || ||| |||| | | ||| |||
Sbjct 2338 TTATCTCCAGCGTGACAGCTTGCATGCCACTGGACGTTTTCCAAACCAAAGGCGAA-GAC 2396
Query 2271 AACCGTAAAAAAGTGGATTTGAGCAATCCACTGGCGCGACTGCTGCGCTACTCACCGAAT 2330
| ||||| || | || || || ||||||||||| || ||| || ||
Sbjct 2397 AGG-GTAAAG--GTCGGGCTGGATAACCCGCTGGCGCGACTCCTTAAGTACCGCCCCAAC 2453
Query 2331 CAGTACATGACCGCCCAAGAATTCAGGGAGGCCATGACGATGCAGCTCTGTTTCTACGGT 2390
| | |||||| ||| || || | | ||||||||| |||||||| || | |||||
Sbjct 2454 GACTTCATGACTGCCTTTGATTTTCGTGTGGCCATGACTATGCAGCTTTGCTATTACGGC 2513
Query 2391 AACGCATATGCACTTGTGGACCGCAACAGCGCAGGTGACGTGATCAGCCTTCTCCCGCTT 2450
|| || || || || | || ||||| | || || ||||| ||||| || | |||||
Sbjct 2514 AATGCCTACGCGCTGATTGAGCGCAATGGGGCTGGGGACGTAATCAGTCTAGTGCCGCTC 2573
Query 2451 CAGTCTGCCAATATGGATGTGAAGCTCGTCGGaaaaaaaG-TGGTTTATCGCTATCAACG 2509
||||| || |||||||| ||| | || || | | ||||| || |||| ||
Sbjct 2574 ATGTCTGTGAACATGGATGTTC-GCTTGGAGGGTAAGCGGATCGTTTACCGATATCGCCG 2632
Query 2510 CGACAGCGAATACGCCGAATTTTCGCAGAAAGAGATTTTTCACCTTAAAGGCTTCGGATT 2569
||||| | | ||||| || || ||| | || ||||||||||| || || || || ||
Sbjct 2633 CGACACCAAGTACGCAGATTTCAAGCAAAGCGATATTTTTCACCTGAAGGGTTTTGGTTT 2692
Query 2570 CACCGGGCTTGTAGGCCTGTCACCCATTGCTTTTGCCTGTAAATCGGCAGGTGTGGCAGT 2629
| ||| || || ||||| || || |||||||| || || | || ||||| || ||
Sbjct 2693 TAACGGCCTGGTTGGCCTTTCGCCGATTGCTTTCGCAGCGAAGACCGCCGGTGTAGCCGT 2752
Query 2630 TGCGATGGAGGACCAGCAGCGAGATTTCTTTGCCAACGGCGCCAAGTCTCCGCAAATCCT 2689
||||||||| || |||||||| || || | ||||||||| |||||||| |||||| | ||
Sbjct 2753 TGCGATGGAAGATCAGCAGCGCGACTTTTATGCCAACGGTGCCAAGTCCCCGCAACTTCT 2812
Query 2690 CTCAACTGGCGA---AAAAGTGCTAACTGAACAGCAGCGCTCCCAGGTCGAAGAGAACTT 2746
|| || || ||| || || | | | ||||| | || ||||| ||||| ||
Sbjct 2813 TATGACAGGGGATGGAAAGGTTCTCAACAAGGATCAGCGGGCGCAAGTCGAGGAGAATTT 2872
Query 2747 CAAAGAGATCGCCGGCGGCCCGGTaaaaaaaCGCCTCTGGATTCTGGAAGCGGGTTTTTC 2806
||| ||||| ||||||| || || || || || |||||||| |||| | |||||| |
Sbjct 2873 CAAGGAGATATCCGGCGGGCCAGTCAAGAAGCGTCTCTGGATCTTGGAGGGAGGTTTTAC 2932
Query 2807 TACATCGGCAATTGGCGTAACTCCGCAGGATGCCGAAATGATGGCGTCCCGAAAATTTCA 2866
|| ||| || ||||| | ||||| || ||||| | ||||| || |||| || ||
Sbjct 2933 GACCCAGGCCATAGGCGTGAGCCCGCAAGACGCCGAGACAATGGCTGCCAGAAAGTTCCA 2992
Query 2867 GGTAAGTGAACTGGCGCGATTCTTTGGCGTACCGCCTCACCTTGTCGGCGACGTCGAGAA 2926
||| ||||| |||||||| ||||| ||||| ||||| || || || |||||||| || ||
Sbjct 2993 GGTGAGTGAGCTGGCGCGGTTCTTCGGCGTGCCGCCGCATCTGGTGGGCGACGTTGAAAA 3052
Query 2927 ATCAACGAGCTGGGGATCGGGCATCGAGCAGCAGAATCTCGGCTTCCTGCAGTACACCCT 2986
||||| |||||||| || || |||||||| ||||| || ||||| || |||||| | ||
Sbjct 3053 GTCAACCAGCTGGGGGTCAGGTATCGAGCAACAGAACCTGGGCTTTCTCCAGTACGCGCT 3112
Query 2987 GCAGCCCTATATCTCCAGGTGGGAAAACAGCATTCAGCGGTGGCTTATTCCTGCTAAGGA 3046
| || || | | ||||| | |||||| ||| |||||| | | | ||
Sbjct 3113 CGACCCTTACCTTGAAATTTGGGAGGGCTGCATTCTGCGATGGCTTGTAAAGCCGAGCGA 3172
Query 3047 TGTTGGCCGCATTCATGCTGAGCACAACCTCGACGGCCTGCTGAGGGGCGATTCGGCATC 3106
| || | |||||||||||||||| ||||| ||||||| || || || | |
Sbjct 3173 CCTCGGGGTGTTCCATGCTGAGCACAACCGAGACGGGTTGCTGAGTGGTGACTCAACCGC 3232
Query 3107 CCGCGCTGCCTTTATGAAGGCAATGGGAGAGGCAGGGCTACGCACCATCAACGAGATGCG 3166
|||||| | | || | || || | ||||| | || ||||||| ||
Sbjct 3233 CCGCGCGAATTACCTAAAAACGTTGATTGATACCGGGCTGCTGACTCCCAACGAGGGCCG 3292
Query 3167 ACGAACGGACAACCTCCCGCCATTGCCGGGTGGCGATGTGGCAATGCGCCAGTCGCAATA 3226
||| ||| ||| |||| || ||||| || || | ||||| |||||| |
Sbjct 3293 GCGAGTCAGCAATAGGCCGAAGCTGCCCGGCGGCGACGTCGCCACACGCCAATCGCAAAA 3352
Query 3227 CGTGCCGATC-ACCGATTTAGGAACCAACAAAGAGCCCCGTAA-TAACGGGGCTTAATTT 3284
||||||| | | | | || | | ||||| ||||| | ||||| ||| |||
Sbjct 3353 CGTGCCGCTTGATCAACTTGGTCA-----AAAGAACCCCGCCCCTGGCGGGGTTTAGTTT 3407
Query 3285 TTATGGGGGC-CGTAATGCCTGAAATCGTAAAAACGCTGTCCTTCGACGAGACAGAAATC 3343
|| ||| | | |||| | | || ||| || || | ||| |||||| |||||
Sbjct 3408 TTCTGGAGCTACCCAATGGCAAATATTCAAAAGACCTTGGCGTTCACCGAGACTCAAATC 3467
Query 3344 AAATTCACCGGTGACGGTAAACAGGGGATTTTTGAAGGCTACGCCTCTGTTTTTAATAAC 3403
|| ||| || || || || || | || || || |||||| |||||| | |
Sbjct 3468 AAGTTCTCCTCGGATGGCAAGGTTGGTGTGTTCGAGGGGTACGCCAGTGTTTTCGACGTC 3527
Query 3404 ACCGATTCCGATGGCGACATCATTCTGCCCGGGGCGTTTAAAAACGCGCTGGCGAACCAG 3463
| ||| || || ||||||||||| |||||||| || || || || || || | ||
Sbjct 3528 ATCGACTCAGACGGCGACATCATCCTGCCCGGCGCCTTCAAGAAGGCTTTGTCTTCGCAA 3587
Query 3464 ACCCGAAAAGTGGCGATGTTTTTTAACCACAGGACGTGGGAACTGCCGGTTGGCAAATGG 3523
| ||| |||| | |||||||||||||| ||| | | ||||| ||||| || |||
Sbjct 3588 AGCCGCCAAGTCGGCATGTTTTTTAACCATCAGACCTACGGCCTGCCTGTTGGAAAGTGG 3647
Query 3524 GACAGCCTGGCTGAGGACGAAAAAGGCCTGTATGTGCGCGGTCAACTTACCCCAGGACAC 3583
| ||||| |||||| ||||| || | || | || | || || || ||
Sbjct 3648 CAGTCGCTGGCGGAGGACAGCAAAGGACTCTTCGTTGGAGGCGAGCTGACGCCCGGTTTG 3707
Query 3584 AGCGGCGCCGCTGACCTGAAAGCGGCAATGCAGCACGGTACGGTTGAAGGTATGTCGGTT 3643
| | || ||||| || || ||| | || || || || ||| ||||||||
Sbjct 3708 TCGGTCTCCAACGACCTCCGGGCAGCCATGGAACATAAGACCGTCGAGGGTTTGTCGGTT 3767
Query 3644 GGCTTTTCCGTTTCGAAAGACGATTACACCATCATTCCAACAGGCCGCATTTTTAAGAAT 3703
||||| |||| || ||||||||| || |||| || |||||| || | |||
Sbjct 3768 GGCTTCACCGTCCTCAAGGACGATTACGCCGTCATCGATACCGGCCGCGCATTCAGCAAT 3827
Query 3704 ATCCAGGCTCTGCGCGAAATCAGCGTCTGCACTTTCCCCGCCAACGAACAGGCTGGCATC 3763
||||||| ||||| || |||||| | ||||| || || ||||| || ||||| |||
Sbjct 3828 GTCCAGGCCCTGCGAGAGATCAGCATTTGCACCTTTCCTGCCAATGAGCAGGCGACCATT 3887
Query 3764 GCAGCCATGAAAAGTGTCGATGGCATTGAA----ACGATTCGTGATGTGGAGAACTGGCT 3819
| ||||||||||| |||| || || || ||||| ||||| ||| | |||||
Sbjct 3888 GACGCCATGAAAAGC----ATGGAATCGATCAGCACCATTCGCGATGTAGAGCATTGGCT 3943
Query 3820 GAGGGATTCAGTCGGCCTCACCAAATCACAGGCAGTTGGGCTAATTGCCCGGTTTAAGTC 3879
||||||||| | ||| || | || || || || | || || || |||||| | |||||
Sbjct 3944 GAGGGATTCGGCCGGTCTTTCGAAGTCGCAAGCCCTGGGCCTGATAGCCCGGATCAAGTC 4003
Query 3880 AGCGATTCGGAGCGAGTCCGAGGGCGACGGAAACGAAGCACAAATAAACGCTCTGCTTCA 3939
|| ||||||| || ||||| || | || |||| | ||| | || |
Sbjct 4004 CGCAGTTCGGAGTGATTCCGAAGGTGGCG------------AAATCACCGCGATCCTGGA 4051
Query 3940 GAGCATCAAATCTTTCCCTTCTAACTTAGGTAAATAATT-ATGTCTGAACTCGCTCTCAT 3998
||||||| || ||||| ||| |||| || ||| ||||| ||| | || | ||
Sbjct 4052 TCGCATCAAGTCATTCCCATCTG---TAGGAAATTAAACCATGTCCGAATTGGCCCAAAT 4108
Query 3999 TCAAAAAGCTATCGAAGAATCCCAGCAGAAAATGACCCAGCTTTTCGATGCGCAGAAAGC 4058
|||||| || |||||| | || ||| ||||| |||| ||||| ||||| ||
Sbjct 4109 TCAAAAGGCAATCGAAACCGCGCAAACGAACATGACTGAGCTGTTCGAGGCGCAAAAGAA 4168
Query 4059 AGAAATCGAAAGCACAGGCCAGGTTTCCAAACAGTTGCAGTCCGACCTAATGAAAGTACA 4118
||| ||| ||| ||| | || ||| || | || ||||||| || ||| ||
Sbjct 4169 AGAGATCACCGCCACCGGCGAAGTGAGCAAGAAGATTCAAACCGACCTGCAGACAGTGCA 4228
Query 4119 GGAAGAGCTGACCAAATCCGGCACTCGCCTCTTCGATCTGGAACAGAAACTGGCATCCGG 4178
||| || |||| | ||||| | ||| | |||||||| || ||| || || |||
Sbjct 4229 GGACGAACTGAAAACGGCCGGCTCCCGCTTGTTCGATCTCGAGTCGAAGCTTGCCGGCGG 4288
Query 4179 CGCT---GAGAATCCTGGTGAGAAGAAATCCTTCTCTGAACGGGCTGCTGAAGAGCTTAT 4235
| || || || |||| | |||||||| ||| |||| ||||| || ||||| || |
Sbjct 4289 CACTCTCGATAACCCTGAAGCCAAGAAATCGTTCGCTGAGCGGGCGGCCGAAGATCTGAA 4348
Query 4236 TAAGTCATGGGACGG---TAAACAGGGCACCTTTGGCGCTAAAACGTTTAACAAGTCACT 4292
||| ||| |||| || |||| | | || | | || | |||| | ||
Sbjct 4349 GAAGGGCTGGAACGGCTCTACGTCCGGCAAAGTGGACGTGATTAGCTTCAGCAAGGCTCT 4408
Query 4293 AGGCAGTGACGCTGATTCGGCTGGCTCACTGATCCAGCCTATGCAGATCCCAGGCATCAT 4352
||| | ||| | ||| ||||| | || ||||||| ||||| ||| ||||| |
Sbjct 4409 CGGCGCAGGCGCCGCTTCTGCTGGTGCGTTGGTCCAGCCCCAGCAGAACCCCGGCATTCT 4468
Query 4353 CATGCCAGGCCTGCGCCGTCTTACCATTCGTGATCTGCTGGCTCAGGGCCGC---ACTTC 4409
|||||| ||||||||||| || ||||| ||||| |||||||| || || ||| |||||
Sbjct 4469 CATGCCCGGCCTGCGCCGGCTGACCATCCGTGACCTGCTGGCGCAAGGTCGCACGACTTC 4528
Query 4410 CAGTAACGCTCTGGAATATGTGCGTGAAGAGGTGTTTACCAATAACGCCGACGTGGTGGC 4469
| |||| | || || ||||| || | || || | ||| | ||||| ||| ||
Sbjct 4529 C---GACGCCATCGAGTACGTGCGCGAGAACGTATTCATCAACAGCGCCGCTCCGGTCGC 4585
Query 4470 AGAGAAAGCACTGAAGCCAGAATCGGATATCACCTTCAGCAAACAAACCGCGAACGTGAA 4529
||| | |||||||| || || | | ||||||| ||| |||| || ||||| ||
Sbjct 4586 CGAGGGCACGCTGAAGCCCGAGTCCAACCTGACCTTCACCAAGGAAACGGCCAACGTCAA 4645
Query 4530 GACCATCGCGCACTGGGTGCAGGCATCACGTCAGGTGATGGATGATGCGCCAATGCTTCA 4589
||| | || |||||| | ||||| || || ||| | ||| ||| || || ||||| |
Sbjct 4646 GACGCTGGCTCACTGGATTCAGGCTTCTCGCCAGATCATGTCTGACGCTCCGATGCTGGA 4705
Query 4590 GTCCTACATTAACAACCGCCTCATGTACGGCCTGGCACTGAAGGAAGAGGGCCAGCTGCT 4649
||||| | ||| ||||| ||| || |||| || ||||| || ||||| ||
Sbjct 4706 ATCCTATGTGAACGGTCGCCTGTTGTTTGGTCTGGACTTGGTCGAAGAAGGGCAGCTTCT 4765
Query 4650 GAACGGCGACGGTACCGGGGATAACCTGGAAGGGCTGAACAAAGTGGCAACCGCCTATGA 4709
|||||||| || ||||| || |||||| || ||||||||||| || |||||||| ||
Sbjct 4766 CAACGGCGATGGCACCGGTGACAACCTGATCGGCCTGAACAAAGTCGCGACCGCCTACGA 4825
Query 4710 CACCTCGCTGAATGCCACCGGCGACACCCGCGCTGACATTATCGCTCACGCTATTTATCA 4769
||| |||| ||||||||||||||||| ||||||||| || || ||||| || | ||
Sbjct 4826 CACTACGCTCAATGCCACCGGCGACACTCGCGCTGACCAGATTGCACACGCGATCTTCCA 4885
Query 4770 GGTGACCGAGTCTGAGTTCAGCGCTTCCGGTATCGTCCTGAACCCGCGCGACTGGCACAA 4829
| | ||| || |||||| ||||| || | || ||||||| ||||||||||||
Sbjct 4886 GACCAGCGAATCCGAGTTCGAGGCTTCGGGCCTGATCTTGAACCCCCGCGACTGGCACGC 4945
Query 4830 CATCGCGTTGCTGAAAGACAATGAAGGCCGCTATATCTTCGGTGGTCCTCAGGCATTCAC 4889
||||||| ||||||||||| ||| || || || ||||| || || ||| ||| ||| |
Sbjct 4946 CATCGCGCTGCTGAAAGACGGTGATGGTCGTTACATCTTTGGCGGCCCTGCGGCGTTCGC 5005
Query 4890 CAGTAACATCATGTGGGGCTTGCCAGTGGTTCCGACTAAGGCGCAGGCCGCCGGCACCTT 4949
| || |||||||||| | || || ||| | || || || ||||| || || ||
Sbjct 5006 CGCCAAGGTCATGTGGGGGCTTCCTGTTGTTGCCACCAAAGCCCAGGCACAGGGAACTTT 5065
Query 4950 TACCGTAGGCGGTTTCGATATGGCCTCACAGGTCTGGGATCGCATGGATGCCACCGTGGA 5009
|| || ||||| ||||| ||||| || ||| ||||||| |||||||| || || | ||
Sbjct 5066 CACTGTTGGCGGCTTCGACATGGCTTCGCAGATCTGGGACCGCATGGACGCGACTATCGA 5125
Query 5010 AGTTAGCCGTGAAGACCGCGATAACTTCGTGAAAAACATGCTGACCATCCTGTGCGAAGA 5069
| ||| | || ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 5126 GATCAGCAACCAGGATCGCGACAACTTCGTGAAAAACATGCTGACCATCCTGTGCGAAGA 5185
Query 5070 GCGTCTGGCGCTGGCGCATTATCGCCCGACAGCAATCATCAAGGGCACCTTC 5121
||| |||||| | | || ||||| || || ||||||||||| ||| | |||
Sbjct 5186 GCGCCTGGCGGTTACCCACTATCGTCCTACCGCAATCATCAAAGGCGCTTTC 5237
>seq3087926
Length=6391
Score = 156 bits (172), Expect = 1e-33
Identities = 328/482 (68%), Gaps = 8/482 (2%)
Strand=Plus/Minus
Query 11826 GATCCGTCACTGGATGAATGCAACGGAACGCTGACGGCCTGCAAACTTCGGTTCGGTGAA 11885
|||||| | |||| | ||||| || ||| || ||||||| | || ||||| ||
Sbjct 5396 GATCCGGCCAAGGATCAGTGCAAGGGCTGCCTGTCGTCCTGCAAGTTGCGATTCGGCGAG 5337
Query 11886 AACAACGAACTCTCGTTTGGTGGGTTCCCGGGTACGTCGCTGAT---CAGGAGTTGAT-A 11941
||||||||||| || ||||| || ||||| | ||| || || | |||| ||| |
Sbjct 5336 AACAACGAACTGTCCTTTGGCGGATTCCCCGCCGTGTCTCTCATTGCCCGGAGCTGACCA 5277
Query 11942 TGCGTCAGAAAACCATCGATGCCATCATGGCGCATGCCGCTGCGGAATACCCGCGAGAGT 12001
|||| || | | ||| | |||||| ||||||||| || |||| || ||||||||||
Sbjct 5276 TGCGCAAGCACATCATTGCGGCCATCCAGGCGCATGCGGCGACGGAGTATCCGCGAGAGT 5217
Query 12002 GCTGCGGCGTGGTGGCGCAGAAAAGCCGGGTTGAGCGTTATTTCCCCTGCCGCAACCTTT 12061
|||||||| || || | |||| | || || ||||| ||||| ||| |
Sbjct 5216 GCTGCGGCCTGCTGTTGGCCGTGGGCCGCGCGCAGAAGTACTTCCCGTGCCGGAACATAG 5157
Query 12062 CTGAAGAGCCGACAGAACATTTTCACCTTTCTCCCGAAGACTACGCAGCTGCCGAAGACT 12121
| | ||||||| ||| | || | ||| ||||| |||||||| || || |||||||
Sbjct 5156 CCAAGGAGCCGAACGAAGAGTTCCGGCTTGACCCCGAGGACTACGCCGCGGCGGAAGACT 5097
Query 12122 GGGGGACGGTGGTAGCCATTGTTCACAGCCACCCTGACGCGACGACGCAGGCCAGC-GAG 12180
||| |||| | | ||| || ||| ||||| ||||| || | ||||||| | |
Sbjct 5096 TGGGCGAGGTGATCGGCATCGTCCACTCGCACCCGGACGCCACCA-GCAGGCCCTCACCG 5038
Query 12181 CTTGATAAGGCGCAATGTGATGCAACGCTGCTGCCCTGGCATATTGTGAGCTGGCCGGAG 12240
| ||| ||| ||||| || ||| |||| ||||| || || ||||| |||
Sbjct 5037 CATGACTTGGCCATGTGTGAGGCCACGGCTTTGCCATGGCACATCCTGTCTTGGCCCGAG 4978
Query 12241 GGGGATTTACGCACCATCCAGCC-GCGCGGAGAACTGCCACTGCTGGAGCGTCCGTTTGT 12299
|| || | ||||| || ||| ||| | || || ||| ||||| |||| ||||| ||
Sbjct 4977 GGTGACTGGCGCACGATTACGCCGGCGGGTAGCAC-GCCGCTGCTCAAGCGCCCGTTCGT 4919
Query 12300 GC 12301
||
Sbjct 4918 GC 4917
>seq3087822
Length=6084
Score = 116 bits (128), Expect = 9e-22
Identities = 300/450 (67%), Gaps = 8/450 (2%)
Strand=Plus/Minus
Query 11856 CTGACGGCCTGCAAACTTCGGTTCGGTGAAAACAACGAACTCTCGTTTGGTGGGTTCCCG 11915
||| || ||||||| | || ||||| |||||||||||||| || || ||||| |||||
Sbjct 2082 CTGTCGTCCTGCAAGTTGCGCTTCGGCGAAAACAACGAACTGTCCTTCGGTGGATTCCCC 2023
Query 11916 GGTACGTCGCTGA---TCAGGAGTTGA-TATGCGTCAGAAAACCATCGATGCCATCATGG 11971
| || |||| || |||| ||| |||||| || | | ||| | || || ||
Sbjct 2022 GCCGTTTCCCTGATTGTCCGGAGCTGACTATGCGCAAGCACATCATTGCCGCTATTCAGG 1963
Query 11972 CGCATGCCGCTGCGGAATACCCGCGAGAGTGCTGCGGCGTGGTGGCGCAGAAAAGCCGGG 12031
|||| || || |||||||| ||||| || |||||||| || || | |||| |
Sbjct 1962 CGCACGCGGCGGCGGAATATCCGCGCGAATGCTGCGGGCTGCTGCTGGCCGTGGGCCGCG 1903
Query 12032 TTGAGCGTTATTTCCCCTGCCGCAACCTTTCTGAAGAGCCGACAGAACATTTTCACCTTT 12091
| || || ||||| ||||| ||| | | ||||||| ||| | || | ||
Sbjct 1902 CTCAGAAGTACTTCCCGTGCCGGAACATCGCCACGGAGCCGAGCGAAGAGTTCAAGCTCG 1843
Query 12092 CTCCCGAAGACTACGCAGCTGCCGAAGACTGGGGGACGGTGGTAGCCATTGTTCACAGCC 12151
|||||| | |||||| || || || |||| ||| |||| | | || || ||| |
Sbjct 1842 ATCCCGAGGGCTACGCTGCGGCAGAGGACTTGGGCGAGGTGATCGGTATAGTCCACTCAC 1783
Query 12152 ACCCTGACGCGACGACGCAGGCCAGC-GAGCTTGATAAGGCGCAATGTGATGCAACGCTG 12210
|||| ||||| || | || | ||| | || || || ||||| || |||
Sbjct 1782 ACCCGGACGCAACCA-GCCGCCCATCACCGCACGACCTTGCCATGTGTGAGGCCACGGCC 1724
Query 12211 CTGCCCTGGCATATTGTGAGCTGGCCGGAGGGGGATTTACGCACCATCCAGCC-GCGCGG 12269
|||||||||||||| | ||||| ||||| || | ||||| ||| ||| || |
Sbjct 1723 GTGCCCTGGCATATTCTCTCGTGGCCCGAGGGCGACATGCGCACGATCACGCCAACGGGC 1664
Query 12270 AGAACTGCCACTGCTGGAGCGTCCGTTTGT 12299
| || ||| ||||| |||| ||||| ||
Sbjct 1663 ACCAC-GCCGCTGCTCAAGCGGCCGTTCGT 1635
>seq3088451
Length=13260
Score = 100 bits (110), Expect = 7e-17
Identities = 243/365 (67%), Gaps = 10/365 (3%)
Strand=Plus/Plus
Query 11962 GCCATCATGGCGCATGCCGCTGCGGAATACCCGCGAGAGTGCTGCGGCGTGGT----GGC 12017
||||| ||||||||| || | || |||||| |||||||||||| || | | |
Sbjct 9814 GCCATTCAGGCGCATGCGGCGTCCGAGTACCCGAAAGAGTGCTGCGGGCTGATACTGGCC 9873
Query 12018 GCAGAAAAGCCGGGTTGAGCGTTATTTCCCCTGCCGCAACCTTTCTGAAGAGCCGACAGA 12077
| | |||||| || |||||||| ||||| ||| || | ||||| | ||
Sbjct 9874 GTCG----GCCGGGCGCAGAAGTATTTCCCGTGCCGGAACATTGCCACGGAGCCAAACGA 9929
Query 12078 ACATTTTCACCTTTCTCCCGAAGACTACGCAGCTGCCGAAGACTGGGGGACGGTGGTAGC 12137
| | || | || ||||| |||||||| || || |||||| ||| |||| | |
Sbjct 9930 AGAGTTCCGGCTCGACCCCGAGGACTACGCCGCGGCGGAAGACCAGGGCCAGGTGATTGG 9989
Query 12138 CATTGTTCACAGCCACCCTGACGCGACGACGCAGGCCAGCG-AGCTTGATAAGGCGCAAT 12196
||| || ||| || || ||||| || | ||||||| || || || |||| |
Sbjct 9990 CATCGTCCACTCGCATCCGGACGCAACCA-GCAGGCCGTCGTCGCGAGACCTGGCGATGT 10048
Query 12197 GTGATGCAACGCTGCTGCCCTGGCATATTGTGAGCTGGCCGGAGGGGGATTTACGCACCA 12256
|||| || ||| |||||||||| ||| || |||||| ||||| || | ||||| |
Sbjct 10049 GTGAGGCCACGACTTTGCCCTGGCACATTCTGTCCTGGCCCGAGGGCGACCTGCGCACGA 10108
Query 12257 TCCAGCCGCGCGGAGAACTGCCACTGCTGGAGCGTCCGTTTGTGCTTGGACACTTCGACT 12316
|| || ||| | ||| |||||| ||| || ||||||| |||| | ||||
Sbjct 10109 TCACTCCAACCGGCAACACGCCGCTGCTGAGGCGCCCATTTGTGCATGGAGCATGGGACT 10168
Query 12317 GCTGG 12321
|||||
Sbjct 10169 GCTGG 10173
>seq3088057
Length=7030
Score = 91.5 bits (100), Expect = 4e-14
Identities = 199/297 (67%), Gaps = 12/297 (4%)
Strand=Plus/Plus
Query 14564 AACCCTGCGTGGATTTTTTACGACCTGGTTGTTT---CTGACCGGTTTGGCCTCGGGCAC 14620
|||||||||||| | ||||| |||||||| | || || | |||||||| |
Sbjct 5648 AACCCTGCGTGGGTGTTTTATGACCTGGTGCTGCACCCTTAC---TACGGCCTCGGCGAT 5704
Query 14621 CGTTTGACCGCTGCGAATATTGATAAATGGACTCTTTATCAGGTTGCTCAGTATTGTGAT 14680
|| | || ||| ||||| ||| | ||||||| | || || || || |||
Sbjct 5705 CGCATCGATGCCACGATGGTTGATCGCTGGTCGCTTTATCGCATCGCGCAATACTGCGAT 5764
Query 14681 CAGATGGTACCAGACGGCAAAGGGGGCAACGGTACAGAACCACGCTATACCTGCAACGTG 14740
|||||||| || || || ||||| ||| | || || |||| |||||||||| ||
Sbjct 5765 CAGATGGTGCCGGATGGAAAAGG------CGGCATGGAGCCGCGCTTTACCTGCAACCTG 5818
Query 14741 TACATTCAGGACCGGAACGACGCCTACACAGTCCTGCGTGATTTTGCCGCTATCTTCCGT 14800
||| | || | | | ||| |||||| | || |||| ||| | || | ||||| |
Sbjct 5819 TACCTGCAAAAGCAGGCCGAGGCCTACGCGGTGCTGCAGGATCTGGCATCGATCTTTCAC 5878
Query 14801 GGCATGACCTACTGGGGCGGGGATCAGATTGTGGCCCTGGCTGACATGCCGCGCGAT 14857
|| || ||||||||| ||| ||||| |||| | || || |||||| |||||
Sbjct 5879 GGTCTGGCCTACTGGGACGGCAGCCAGATCGTGGTCAACGCCGATATGCCGGGCGAT 5935
>seq2884985
Length=308
Score = 87.8 bits (96), Expect = 4e-13
Identities = 167/244 (68%), Gaps = 14/244 (6%)
Strand=Plus/Minus
Query 16798 CGCGGGGATGGGTATCGGCGTGGAGAATACGCCATCCGGCATGCAGTCGCAGGTTATCTT 16857
|||||| || || | || ||||||| | | |||| ||||||||||| | ||| |
Sbjct 291 CGCGGGTATCGGGCTTGGGTTGGAGAACGGGTCGGGCGGCCTGCAGTCGCAGTTCATCAT 232
Query 16858 CCTGGCTGATCGCTTCGCCGTCACCACGGCA-GCCGGAAATAGCGTGGCTTTGCCGTTTG 16916
| || || || |||||| || |||| ||||| | |||| || ||||
Sbjct 231 CGACGCCGACCGGTTCGCCATCG----GGCAAGCCGGCAT---CGTG------CCCTTTG 185
Query 16917 TGATCCAGAATGGACAGACATTCATCCGGGCCAGTTTCATCCAGGACGGCACTATCAGCA 16976
| | ||| ||| ||||| ||||| | |||||||||||||||||| |||| ||
Sbjct 184 CGGTACAGGGTGGGCAGACTTTCATTAAATCGGCTTTCATCCAGGACGGCACGATCACCA 125
Query 16977 ACGCAAAGATTGGTAATTTTATCCAGTCGAACAATTATGTTGCTGGTTCTGCTGGCTGGA 17036
|||| ||||| || || | |||||||| || || || | | ||| ||||||||||
Sbjct 124 ACGCCAAGATCGGCAACTACATCCAGTCCAATAACTACGACCCAGGTAAGGCTGGCTGGA 65
Query 17037 AGCT 17040
||||
Sbjct 64 AGCT 61
>seq347631
Length=610
Score = 80.6 bits (88), Expect = 6e-11
Identities = 75/93 (81%), Gaps = 2/93 (2%)
Strand=Plus/Minus
Query 14327 AAAATCGGCGACACGATGATGCT-GCAGAGCTTCACCGAGGTGATTGATGCCAAACTGCG 14385
|||||| |||||||||| | | || | ||||||| |||||||| || ||||| | ||
Sbjct 530 AAAATCTCCGACACGATGCAGATTGCCG-GCTTCACAGAGGTGATCGACGCCAAGATCCG 472
Query 14386 CTACCCGAACACCGCGCTGCTCTACGTCGAATT 14418
||||||||||||||| |||||||| |||| ||
Sbjct 471 TTACCCGAACACCGCGTTGCTCTACATCGAGTT 439
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 119362771091622
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |