Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09] 3,088,511 sequences; 2,785,377,831 total letters Query= NC_019705.1 Length=38759 Score E Sequences producing significant alignments: (Bits) Value seq3088379 1086 0.0 seq3087926 156 1e-33 seq3087822 116 9e-22 seq3088451 100 7e-17 seq3088057 91.5 4e-14 seq2884985 87.8 4e-13 seq347631 80.6 6e-11 >seq3088379 Length=10556 Score = 1086 bits (1204), Expect = 0.0 Identities = 2155/3172 (68%), Gaps = 56/3172 (2%) Strand=Plus/Plus Query 1973 TCGACGACTTCATTTTCCGACCGCTGAGCATGTGATGGAAGAACCTAAATACACGATTGA 2032 ||||||||||| | | | ||||| ||||||||| |||| ||| | | |||| || || Sbjct 2099 TCGACGACTTCCTCTCCAGACCGATGAGCATGTAATGGCAGATACCGACTACAGCATCGA 2158 Query 2033 CCTGCGAACCAATAACGGCTGGTGGGCAAGGCTGCAGTCCTGGTTTGTCGGCGGGCGTTT 2092 |||||| || | | ||||| | || | || ||||||||||| || | Sbjct 2159 CCTGCGCACGCGCAGTCCATTCTGGGCGCGTATGGCGAGCTTCTTTGTCGGCGGCCGCCT 2218 Query 2093 AGTCACCCCAAATCAGGGCTCACAGACGGGGCCTGTTTCGGCCCACGGACACCTGGGCGA 2152 ||||| || | | || |||||||| || || || || ||||| || |||| || Sbjct 2219 GGTCACACCTGAAAAAGGTTCACAGACAGGCCCAGTATCAGCCCAGGGTGTAGTGGGTGA 2278 Query 2153 TTCATCCATTAACGATGAACGGATACTGCAAATTTCGACTGTGTGGCGCT-GCGTGAGCC 2211 ||| | | |||||||| || || || || |||| |||| |||| ||||| | | Sbjct 2279 TTCGGTCGTAAACGATGAGCGCTCGCTCCAGATCGCGACCGTGTT-CGCTTGCGTGCGGC 2337 Query 2212 TGATTTCAACGCTCACGGCATGCTTACCGCTTGATGTCTTCGAAAC-AGACCAGAATGAC 2270 | || || | | || || ||| | || || || || ||| |||| | | ||| ||| Sbjct 2338 TTATCTCCAGCGTGACAGCTTGCATGCCACTGGACGTTTTCCAAACCAAAGGCGAA-GAC 2396 Query 2271 AACCGTAAAAAAGTGGATTTGAGCAATCCACTGGCGCGACTGCTGCGCTACTCACCGAAT 2330 | ||||| || | || || || ||||||||||| || ||| || || Sbjct 2397 AGG-GTAAAG--GTCGGGCTGGATAACCCGCTGGCGCGACTCCTTAAGTACCGCCCCAAC 2453 Query 2331 CAGTACATGACCGCCCAAGAATTCAGGGAGGCCATGACGATGCAGCTCTGTTTCTACGGT 2390 | | |||||| ||| || || | | ||||||||| |||||||| || | ||||| Sbjct 2454 GACTTCATGACTGCCTTTGATTTTCGTGTGGCCATGACTATGCAGCTTTGCTATTACGGC 2513 Query 2391 AACGCATATGCACTTGTGGACCGCAACAGCGCAGGTGACGTGATCAGCCTTCTCCCGCTT 2450 || || || || || | || ||||| | || || ||||| ||||| || | ||||| Sbjct 2514 AATGCCTACGCGCTGATTGAGCGCAATGGGGCTGGGGACGTAATCAGTCTAGTGCCGCTC 2573 Query 2451 CAGTCTGCCAATATGGATGTGAAGCTCGTCGGaaaaaaaG-TGGTTTATCGCTATCAACG 2509 ||||| || |||||||| ||| | || || | | ||||| || |||| || Sbjct 2574 ATGTCTGTGAACATGGATGTTC-GCTTGGAGGGTAAGCGGATCGTTTACCGATATCGCCG 2632 Query 2510 CGACAGCGAATACGCCGAATTTTCGCAGAAAGAGATTTTTCACCTTAAAGGCTTCGGATT 2569 ||||| | | ||||| || || ||| | || ||||||||||| || || || || || Sbjct 2633 CGACACCAAGTACGCAGATTTCAAGCAAAGCGATATTTTTCACCTGAAGGGTTTTGGTTT 2692 Query 2570 CACCGGGCTTGTAGGCCTGTCACCCATTGCTTTTGCCTGTAAATCGGCAGGTGTGGCAGT 2629 | ||| || || ||||| || || |||||||| || || | || ||||| || || Sbjct 2693 TAACGGCCTGGTTGGCCTTTCGCCGATTGCTTTCGCAGCGAAGACCGCCGGTGTAGCCGT 2752 Query 2630 TGCGATGGAGGACCAGCAGCGAGATTTCTTTGCCAACGGCGCCAAGTCTCCGCAAATCCT 2689 ||||||||| || |||||||| || || | ||||||||| |||||||| |||||| | || Sbjct 2753 TGCGATGGAAGATCAGCAGCGCGACTTTTATGCCAACGGTGCCAAGTCCCCGCAACTTCT 2812 Query 2690 CTCAACTGGCGA---AAAAGTGCTAACTGAACAGCAGCGCTCCCAGGTCGAAGAGAACTT 2746 || || || ||| || || | | | ||||| | || ||||| ||||| || Sbjct 2813 TATGACAGGGGATGGAAAGGTTCTCAACAAGGATCAGCGGGCGCAAGTCGAGGAGAATTT 2872 Query 2747 CAAAGAGATCGCCGGCGGCCCGGTaaaaaaaCGCCTCTGGATTCTGGAAGCGGGTTTTTC 2806 ||| ||||| ||||||| || || || || || |||||||| |||| | |||||| | Sbjct 2873 CAAGGAGATATCCGGCGGGCCAGTCAAGAAGCGTCTCTGGATCTTGGAGGGAGGTTTTAC 2932 Query 2807 TACATCGGCAATTGGCGTAACTCCGCAGGATGCCGAAATGATGGCGTCCCGAAAATTTCA 2866 || ||| || ||||| | ||||| || ||||| | ||||| || |||| || || Sbjct 2933 GACCCAGGCCATAGGCGTGAGCCCGCAAGACGCCGAGACAATGGCTGCCAGAAAGTTCCA 2992 Query 2867 GGTAAGTGAACTGGCGCGATTCTTTGGCGTACCGCCTCACCTTGTCGGCGACGTCGAGAA 2926 ||| ||||| |||||||| ||||| ||||| ||||| || || || |||||||| || || Sbjct 2993 GGTGAGTGAGCTGGCGCGGTTCTTCGGCGTGCCGCCGCATCTGGTGGGCGACGTTGAAAA 3052 Query 2927 ATCAACGAGCTGGGGATCGGGCATCGAGCAGCAGAATCTCGGCTTCCTGCAGTACACCCT 2986 ||||| |||||||| || || |||||||| ||||| || ||||| || |||||| | || Sbjct 3053 GTCAACCAGCTGGGGGTCAGGTATCGAGCAACAGAACCTGGGCTTTCTCCAGTACGCGCT 3112 Query 2987 GCAGCCCTATATCTCCAGGTGGGAAAACAGCATTCAGCGGTGGCTTATTCCTGCTAAGGA 3046 | || || | | ||||| | |||||| ||| |||||| | | | || Sbjct 3113 CGACCCTTACCTTGAAATTTGGGAGGGCTGCATTCTGCGATGGCTTGTAAAGCCGAGCGA 3172 Query 3047 TGTTGGCCGCATTCATGCTGAGCACAACCTCGACGGCCTGCTGAGGGGCGATTCGGCATC 3106 | || | |||||||||||||||| ||||| ||||||| || || || | | Sbjct 3173 CCTCGGGGTGTTCCATGCTGAGCACAACCGAGACGGGTTGCTGAGTGGTGACTCAACCGC 3232 Query 3107 CCGCGCTGCCTTTATGAAGGCAATGGGAGAGGCAGGGCTACGCACCATCAACGAGATGCG 3166 |||||| | | || | || || | ||||| | || ||||||| || Sbjct 3233 CCGCGCGAATTACCTAAAAACGTTGATTGATACCGGGCTGCTGACTCCCAACGAGGGCCG 3292 Query 3167 ACGAACGGACAACCTCCCGCCATTGCCGGGTGGCGATGTGGCAATGCGCCAGTCGCAATA 3226 ||| ||| ||| |||| || ||||| || || | ||||| |||||| | Sbjct 3293 GCGAGTCAGCAATAGGCCGAAGCTGCCCGGCGGCGACGTCGCCACACGCCAATCGCAAAA 3352 Query 3227 CGTGCCGATC-ACCGATTTAGGAACCAACAAAGAGCCCCGTAA-TAACGGGGCTTAATTT 3284 ||||||| | | | | || | | ||||| ||||| | ||||| ||| ||| Sbjct 3353 CGTGCCGCTTGATCAACTTGGTCA-----AAAGAACCCCGCCCCTGGCGGGGTTTAGTTT 3407 Query 3285 TTATGGGGGC-CGTAATGCCTGAAATCGTAAAAACGCTGTCCTTCGACGAGACAGAAATC 3343 || ||| | | |||| | | || ||| || || | ||| |||||| ||||| Sbjct 3408 TTCTGGAGCTACCCAATGGCAAATATTCAAAAGACCTTGGCGTTCACCGAGACTCAAATC 3467 Query 3344 AAATTCACCGGTGACGGTAAACAGGGGATTTTTGAAGGCTACGCCTCTGTTTTTAATAAC 3403 || ||| || || || || || | || || || |||||| |||||| | | Sbjct 3468 AAGTTCTCCTCGGATGGCAAGGTTGGTGTGTTCGAGGGGTACGCCAGTGTTTTCGACGTC 3527 Query 3404 ACCGATTCCGATGGCGACATCATTCTGCCCGGGGCGTTTAAAAACGCGCTGGCGAACCAG 3463 | ||| || || ||||||||||| |||||||| || || || || || || | || Sbjct 3528 ATCGACTCAGACGGCGACATCATCCTGCCCGGCGCCTTCAAGAAGGCTTTGTCTTCGCAA 3587 Query 3464 ACCCGAAAAGTGGCGATGTTTTTTAACCACAGGACGTGGGAACTGCCGGTTGGCAAATGG 3523 | ||| |||| | |||||||||||||| ||| | | ||||| ||||| || ||| Sbjct 3588 AGCCGCCAAGTCGGCATGTTTTTTAACCATCAGACCTACGGCCTGCCTGTTGGAAAGTGG 3647 Query 3524 GACAGCCTGGCTGAGGACGAAAAAGGCCTGTATGTGCGCGGTCAACTTACCCCAGGACAC 3583 | ||||| |||||| ||||| || | || | || | || || || || Sbjct 3648 CAGTCGCTGGCGGAGGACAGCAAAGGACTCTTCGTTGGAGGCGAGCTGACGCCCGGTTTG 3707 Query 3584 AGCGGCGCCGCTGACCTGAAAGCGGCAATGCAGCACGGTACGGTTGAAGGTATGTCGGTT 3643 | | || ||||| || || ||| | || || || || ||| |||||||| Sbjct 3708 TCGGTCTCCAACGACCTCCGGGCAGCCATGGAACATAAGACCGTCGAGGGTTTGTCGGTT 3767 Query 3644 GGCTTTTCCGTTTCGAAAGACGATTACACCATCATTCCAACAGGCCGCATTTTTAAGAAT 3703 ||||| |||| || ||||||||| || |||| || |||||| || | ||| Sbjct 3768 GGCTTCACCGTCCTCAAGGACGATTACGCCGTCATCGATACCGGCCGCGCATTCAGCAAT 3827 Query 3704 ATCCAGGCTCTGCGCGAAATCAGCGTCTGCACTTTCCCCGCCAACGAACAGGCTGGCATC 3763 ||||||| ||||| || |||||| | ||||| || || ||||| || ||||| ||| Sbjct 3828 GTCCAGGCCCTGCGAGAGATCAGCATTTGCACCTTTCCTGCCAATGAGCAGGCGACCATT 3887 Query 3764 GCAGCCATGAAAAGTGTCGATGGCATTGAA----ACGATTCGTGATGTGGAGAACTGGCT 3819 | ||||||||||| |||| || || || ||||| ||||| ||| | ||||| Sbjct 3888 GACGCCATGAAAAGC----ATGGAATCGATCAGCACCATTCGCGATGTAGAGCATTGGCT 3943 Query 3820 GAGGGATTCAGTCGGCCTCACCAAATCACAGGCAGTTGGGCTAATTGCCCGGTTTAAGTC 3879 ||||||||| | ||| || | || || || || | || || || |||||| | ||||| Sbjct 3944 GAGGGATTCGGCCGGTCTTTCGAAGTCGCAAGCCCTGGGCCTGATAGCCCGGATCAAGTC 4003 Query 3880 AGCGATTCGGAGCGAGTCCGAGGGCGACGGAAACGAAGCACAAATAAACGCTCTGCTTCA 3939 || ||||||| || ||||| || | || |||| | ||| | || | Sbjct 4004 CGCAGTTCGGAGTGATTCCGAAGGTGGCG------------AAATCACCGCGATCCTGGA 4051 Query 3940 GAGCATCAAATCTTTCCCTTCTAACTTAGGTAAATAATT-ATGTCTGAACTCGCTCTCAT 3998 ||||||| || ||||| ||| |||| || ||| ||||| ||| | || | || Sbjct 4052 TCGCATCAAGTCATTCCCATCTG---TAGGAAATTAAACCATGTCCGAATTGGCCCAAAT 4108 Query 3999 TCAAAAAGCTATCGAAGAATCCCAGCAGAAAATGACCCAGCTTTTCGATGCGCAGAAAGC 4058 |||||| || |||||| | || ||| ||||| |||| ||||| ||||| || Sbjct 4109 TCAAAAGGCAATCGAAACCGCGCAAACGAACATGACTGAGCTGTTCGAGGCGCAAAAGAA 4168 Query 4059 AGAAATCGAAAGCACAGGCCAGGTTTCCAAACAGTTGCAGTCCGACCTAATGAAAGTACA 4118 ||| ||| ||| ||| | || ||| || | || ||||||| || ||| || Sbjct 4169 AGAGATCACCGCCACCGGCGAAGTGAGCAAGAAGATTCAAACCGACCTGCAGACAGTGCA 4228 Query 4119 GGAAGAGCTGACCAAATCCGGCACTCGCCTCTTCGATCTGGAACAGAAACTGGCATCCGG 4178 ||| || |||| | ||||| | ||| | |||||||| || ||| || || ||| Sbjct 4229 GGACGAACTGAAAACGGCCGGCTCCCGCTTGTTCGATCTCGAGTCGAAGCTTGCCGGCGG 4288 Query 4179 CGCT---GAGAATCCTGGTGAGAAGAAATCCTTCTCTGAACGGGCTGCTGAAGAGCTTAT 4235 | || || || |||| | |||||||| ||| |||| ||||| || ||||| || | Sbjct 4289 CACTCTCGATAACCCTGAAGCCAAGAAATCGTTCGCTGAGCGGGCGGCCGAAGATCTGAA 4348 Query 4236 TAAGTCATGGGACGG---TAAACAGGGCACCTTTGGCGCTAAAACGTTTAACAAGTCACT 4292 ||| ||| |||| || |||| | | || | | || | |||| | || Sbjct 4349 GAAGGGCTGGAACGGCTCTACGTCCGGCAAAGTGGACGTGATTAGCTTCAGCAAGGCTCT 4408 Query 4293 AGGCAGTGACGCTGATTCGGCTGGCTCACTGATCCAGCCTATGCAGATCCCAGGCATCAT 4352 ||| | ||| | ||| ||||| | || ||||||| ||||| ||| ||||| | Sbjct 4409 CGGCGCAGGCGCCGCTTCTGCTGGTGCGTTGGTCCAGCCCCAGCAGAACCCCGGCATTCT 4468 Query 4353 CATGCCAGGCCTGCGCCGTCTTACCATTCGTGATCTGCTGGCTCAGGGCCGC---ACTTC 4409 |||||| ||||||||||| || ||||| ||||| |||||||| || || ||| ||||| Sbjct 4469 CATGCCCGGCCTGCGCCGGCTGACCATCCGTGACCTGCTGGCGCAAGGTCGCACGACTTC 4528 Query 4410 CAGTAACGCTCTGGAATATGTGCGTGAAGAGGTGTTTACCAATAACGCCGACGTGGTGGC 4469 | |||| | || || ||||| || | || || | ||| | ||||| ||| || Sbjct 4529 C---GACGCCATCGAGTACGTGCGCGAGAACGTATTCATCAACAGCGCCGCTCCGGTCGC 4585 Query 4470 AGAGAAAGCACTGAAGCCAGAATCGGATATCACCTTCAGCAAACAAACCGCGAACGTGAA 4529 ||| | |||||||| || || | | ||||||| ||| |||| || ||||| || Sbjct 4586 CGAGGGCACGCTGAAGCCCGAGTCCAACCTGACCTTCACCAAGGAAACGGCCAACGTCAA 4645 Query 4530 GACCATCGCGCACTGGGTGCAGGCATCACGTCAGGTGATGGATGATGCGCCAATGCTTCA 4589 ||| | || |||||| | ||||| || || ||| | ||| ||| || || ||||| | Sbjct 4646 GACGCTGGCTCACTGGATTCAGGCTTCTCGCCAGATCATGTCTGACGCTCCGATGCTGGA 4705 Query 4590 GTCCTACATTAACAACCGCCTCATGTACGGCCTGGCACTGAAGGAAGAGGGCCAGCTGCT 4649 ||||| | ||| ||||| ||| || |||| || ||||| || ||||| || Sbjct 4706 ATCCTATGTGAACGGTCGCCTGTTGTTTGGTCTGGACTTGGTCGAAGAAGGGCAGCTTCT 4765 Query 4650 GAACGGCGACGGTACCGGGGATAACCTGGAAGGGCTGAACAAAGTGGCAACCGCCTATGA 4709 |||||||| || ||||| || |||||| || ||||||||||| || |||||||| || Sbjct 4766 CAACGGCGATGGCACCGGTGACAACCTGATCGGCCTGAACAAAGTCGCGACCGCCTACGA 4825 Query 4710 CACCTCGCTGAATGCCACCGGCGACACCCGCGCTGACATTATCGCTCACGCTATTTATCA 4769 ||| |||| ||||||||||||||||| ||||||||| || || ||||| || | || Sbjct 4826 CACTACGCTCAATGCCACCGGCGACACTCGCGCTGACCAGATTGCACACGCGATCTTCCA 4885 Query 4770 GGTGACCGAGTCTGAGTTCAGCGCTTCCGGTATCGTCCTGAACCCGCGCGACTGGCACAA 4829 | | ||| || |||||| ||||| || | || ||||||| |||||||||||| Sbjct 4886 GACCAGCGAATCCGAGTTCGAGGCTTCGGGCCTGATCTTGAACCCCCGCGACTGGCACGC 4945 Query 4830 CATCGCGTTGCTGAAAGACAATGAAGGCCGCTATATCTTCGGTGGTCCTCAGGCATTCAC 4889 ||||||| ||||||||||| ||| || || || ||||| || || ||| ||| ||| | Sbjct 4946 CATCGCGCTGCTGAAAGACGGTGATGGTCGTTACATCTTTGGCGGCCCTGCGGCGTTCGC 5005 Query 4890 CAGTAACATCATGTGGGGCTTGCCAGTGGTTCCGACTAAGGCGCAGGCCGCCGGCACCTT 4949 | || |||||||||| | || || ||| | || || || ||||| || || || Sbjct 5006 CGCCAAGGTCATGTGGGGGCTTCCTGTTGTTGCCACCAAAGCCCAGGCACAGGGAACTTT 5065 Query 4950 TACCGTAGGCGGTTTCGATATGGCCTCACAGGTCTGGGATCGCATGGATGCCACCGTGGA 5009 || || ||||| ||||| ||||| || ||| ||||||| |||||||| || || | || Sbjct 5066 CACTGTTGGCGGCTTCGACATGGCTTCGCAGATCTGGGACCGCATGGACGCGACTATCGA 5125 Query 5010 AGTTAGCCGTGAAGACCGCGATAACTTCGTGAAAAACATGCTGACCATCCTGTGCGAAGA 5069 | ||| | || ||||| |||||||||||||||||||||||||||||||||||||| Sbjct 5126 GATCAGCAACCAGGATCGCGACAACTTCGTGAAAAACATGCTGACCATCCTGTGCGAAGA 5185 Query 5070 GCGTCTGGCGCTGGCGCATTATCGCCCGACAGCAATCATCAAGGGCACCTTC 5121 ||| |||||| | | || ||||| || || ||||||||||| ||| | ||| Sbjct 5186 GCGCCTGGCGGTTACCCACTATCGTCCTACCGCAATCATCAAAGGCGCTTTC 5237 >seq3087926 Length=6391 Score = 156 bits (172), Expect = 1e-33 Identities = 328/482 (68%), Gaps = 8/482 (2%) Strand=Plus/Minus Query 11826 GATCCGTCACTGGATGAATGCAACGGAACGCTGACGGCCTGCAAACTTCGGTTCGGTGAA 11885 |||||| | |||| | ||||| || ||| || ||||||| | || ||||| || Sbjct 5396 GATCCGGCCAAGGATCAGTGCAAGGGCTGCCTGTCGTCCTGCAAGTTGCGATTCGGCGAG 5337 Query 11886 AACAACGAACTCTCGTTTGGTGGGTTCCCGGGTACGTCGCTGAT---CAGGAGTTGAT-A 11941 ||||||||||| || ||||| || ||||| | ||| || || | |||| ||| | Sbjct 5336 AACAACGAACTGTCCTTTGGCGGATTCCCCGCCGTGTCTCTCATTGCCCGGAGCTGACCA 5277 Query 11942 TGCGTCAGAAAACCATCGATGCCATCATGGCGCATGCCGCTGCGGAATACCCGCGAGAGT 12001 |||| || | | ||| | |||||| ||||||||| || |||| || |||||||||| Sbjct 5276 TGCGCAAGCACATCATTGCGGCCATCCAGGCGCATGCGGCGACGGAGTATCCGCGAGAGT 5217 Query 12002 GCTGCGGCGTGGTGGCGCAGAAAAGCCGGGTTGAGCGTTATTTCCCCTGCCGCAACCTTT 12061 |||||||| || || | |||| | || || ||||| ||||| ||| | Sbjct 5216 GCTGCGGCCTGCTGTTGGCCGTGGGCCGCGCGCAGAAGTACTTCCCGTGCCGGAACATAG 5157 Query 12062 CTGAAGAGCCGACAGAACATTTTCACCTTTCTCCCGAAGACTACGCAGCTGCCGAAGACT 12121 | | ||||||| ||| | || | ||| ||||| |||||||| || || ||||||| Sbjct 5156 CCAAGGAGCCGAACGAAGAGTTCCGGCTTGACCCCGAGGACTACGCCGCGGCGGAAGACT 5097 Query 12122 GGGGGACGGTGGTAGCCATTGTTCACAGCCACCCTGACGCGACGACGCAGGCCAGC-GAG 12180 ||| |||| | | ||| || ||| ||||| ||||| || | ||||||| | | Sbjct 5096 TGGGCGAGGTGATCGGCATCGTCCACTCGCACCCGGACGCCACCA-GCAGGCCCTCACCG 5038 Query 12181 CTTGATAAGGCGCAATGTGATGCAACGCTGCTGCCCTGGCATATTGTGAGCTGGCCGGAG 12240 | ||| ||| ||||| || ||| |||| ||||| || || ||||| ||| Sbjct 5037 CATGACTTGGCCATGTGTGAGGCCACGGCTTTGCCATGGCACATCCTGTCTTGGCCCGAG 4978 Query 12241 GGGGATTTACGCACCATCCAGCC-GCGCGGAGAACTGCCACTGCTGGAGCGTCCGTTTGT 12299 || || | ||||| || ||| ||| | || || ||| ||||| |||| ||||| || Sbjct 4977 GGTGACTGGCGCACGATTACGCCGGCGGGTAGCAC-GCCGCTGCTCAAGCGCCCGTTCGT 4919 Query 12300 GC 12301 || Sbjct 4918 GC 4917 >seq3087822 Length=6084 Score = 116 bits (128), Expect = 9e-22 Identities = 300/450 (67%), Gaps = 8/450 (2%) Strand=Plus/Minus Query 11856 CTGACGGCCTGCAAACTTCGGTTCGGTGAAAACAACGAACTCTCGTTTGGTGGGTTCCCG 11915 ||| || ||||||| | || ||||| |||||||||||||| || || ||||| ||||| Sbjct 2082 CTGTCGTCCTGCAAGTTGCGCTTCGGCGAAAACAACGAACTGTCCTTCGGTGGATTCCCC 2023 Query 11916 GGTACGTCGCTGA---TCAGGAGTTGA-TATGCGTCAGAAAACCATCGATGCCATCATGG 11971 | || |||| || |||| ||| |||||| || | | ||| | || || || Sbjct 2022 GCCGTTTCCCTGATTGTCCGGAGCTGACTATGCGCAAGCACATCATTGCCGCTATTCAGG 1963 Query 11972 CGCATGCCGCTGCGGAATACCCGCGAGAGTGCTGCGGCGTGGTGGCGCAGAAAAGCCGGG 12031 |||| || || |||||||| ||||| || |||||||| || || | |||| | Sbjct 1962 CGCACGCGGCGGCGGAATATCCGCGCGAATGCTGCGGGCTGCTGCTGGCCGTGGGCCGCG 1903 Query 12032 TTGAGCGTTATTTCCCCTGCCGCAACCTTTCTGAAGAGCCGACAGAACATTTTCACCTTT 12091 | || || ||||| ||||| ||| | | ||||||| ||| | || | || Sbjct 1902 CTCAGAAGTACTTCCCGTGCCGGAACATCGCCACGGAGCCGAGCGAAGAGTTCAAGCTCG 1843 Query 12092 CTCCCGAAGACTACGCAGCTGCCGAAGACTGGGGGACGGTGGTAGCCATTGTTCACAGCC 12151 |||||| | |||||| || || || |||| ||| |||| | | || || ||| | Sbjct 1842 ATCCCGAGGGCTACGCTGCGGCAGAGGACTTGGGCGAGGTGATCGGTATAGTCCACTCAC 1783 Query 12152 ACCCTGACGCGACGACGCAGGCCAGC-GAGCTTGATAAGGCGCAATGTGATGCAACGCTG 12210 |||| ||||| || | || | ||| | || || || ||||| || ||| Sbjct 1782 ACCCGGACGCAACCA-GCCGCCCATCACCGCACGACCTTGCCATGTGTGAGGCCACGGCC 1724 Query 12211 CTGCCCTGGCATATTGTGAGCTGGCCGGAGGGGGATTTACGCACCATCCAGCC-GCGCGG 12269 |||||||||||||| | ||||| ||||| || | ||||| ||| ||| || | Sbjct 1723 GTGCCCTGGCATATTCTCTCGTGGCCCGAGGGCGACATGCGCACGATCACGCCAACGGGC 1664 Query 12270 AGAACTGCCACTGCTGGAGCGTCCGTTTGT 12299 | || ||| ||||| |||| ||||| || Sbjct 1663 ACCAC-GCCGCTGCTCAAGCGGCCGTTCGT 1635 >seq3088451 Length=13260 Score = 100 bits (110), Expect = 7e-17 Identities = 243/365 (67%), Gaps = 10/365 (3%) Strand=Plus/Plus Query 11962 GCCATCATGGCGCATGCCGCTGCGGAATACCCGCGAGAGTGCTGCGGCGTGGT----GGC 12017 ||||| ||||||||| || | || |||||| |||||||||||| || | | | Sbjct 9814 GCCATTCAGGCGCATGCGGCGTCCGAGTACCCGAAAGAGTGCTGCGGGCTGATACTGGCC 9873 Query 12018 GCAGAAAAGCCGGGTTGAGCGTTATTTCCCCTGCCGCAACCTTTCTGAAGAGCCGACAGA 12077 | | |||||| || |||||||| ||||| ||| || | ||||| | || Sbjct 9874 GTCG----GCCGGGCGCAGAAGTATTTCCCGTGCCGGAACATTGCCACGGAGCCAAACGA 9929 Query 12078 ACATTTTCACCTTTCTCCCGAAGACTACGCAGCTGCCGAAGACTGGGGGACGGTGGTAGC 12137 | | || | || ||||| |||||||| || || |||||| ||| |||| | | Sbjct 9930 AGAGTTCCGGCTCGACCCCGAGGACTACGCCGCGGCGGAAGACCAGGGCCAGGTGATTGG 9989 Query 12138 CATTGTTCACAGCCACCCTGACGCGACGACGCAGGCCAGCG-AGCTTGATAAGGCGCAAT 12196 ||| || ||| || || ||||| || | ||||||| || || || |||| | Sbjct 9990 CATCGTCCACTCGCATCCGGACGCAACCA-GCAGGCCGTCGTCGCGAGACCTGGCGATGT 10048 Query 12197 GTGATGCAACGCTGCTGCCCTGGCATATTGTGAGCTGGCCGGAGGGGGATTTACGCACCA 12256 |||| || ||| |||||||||| ||| || |||||| ||||| || | ||||| | Sbjct 10049 GTGAGGCCACGACTTTGCCCTGGCACATTCTGTCCTGGCCCGAGGGCGACCTGCGCACGA 10108 Query 12257 TCCAGCCGCGCGGAGAACTGCCACTGCTGGAGCGTCCGTTTGTGCTTGGACACTTCGACT 12316 || || ||| | ||| |||||| ||| || ||||||| |||| | |||| Sbjct 10109 TCACTCCAACCGGCAACACGCCGCTGCTGAGGCGCCCATTTGTGCATGGAGCATGGGACT 10168 Query 12317 GCTGG 12321 ||||| Sbjct 10169 GCTGG 10173 >seq3088057 Length=7030 Score = 91.5 bits (100), Expect = 4e-14 Identities = 199/297 (67%), Gaps = 12/297 (4%) Strand=Plus/Plus Query 14564 AACCCTGCGTGGATTTTTTACGACCTGGTTGTTT---CTGACCGGTTTGGCCTCGGGCAC 14620 |||||||||||| | ||||| |||||||| | || || | |||||||| | Sbjct 5648 AACCCTGCGTGGGTGTTTTATGACCTGGTGCTGCACCCTTAC---TACGGCCTCGGCGAT 5704 Query 14621 CGTTTGACCGCTGCGAATATTGATAAATGGACTCTTTATCAGGTTGCTCAGTATTGTGAT 14680 || | || ||| ||||| ||| | ||||||| | || || || || ||| Sbjct 5705 CGCATCGATGCCACGATGGTTGATCGCTGGTCGCTTTATCGCATCGCGCAATACTGCGAT 5764 Query 14681 CAGATGGTACCAGACGGCAAAGGGGGCAACGGTACAGAACCACGCTATACCTGCAACGTG 14740 |||||||| || || || ||||| ||| | || || |||| |||||||||| || Sbjct 5765 CAGATGGTGCCGGATGGAAAAGG------CGGCATGGAGCCGCGCTTTACCTGCAACCTG 5818 Query 14741 TACATTCAGGACCGGAACGACGCCTACACAGTCCTGCGTGATTTTGCCGCTATCTTCCGT 14800 ||| | || | | | ||| |||||| | || |||| ||| | || | ||||| | Sbjct 5819 TACCTGCAAAAGCAGGCCGAGGCCTACGCGGTGCTGCAGGATCTGGCATCGATCTTTCAC 5878 Query 14801 GGCATGACCTACTGGGGCGGGGATCAGATTGTGGCCCTGGCTGACATGCCGCGCGAT 14857 || || ||||||||| ||| ||||| |||| | || || |||||| ||||| Sbjct 5879 GGTCTGGCCTACTGGGACGGCAGCCAGATCGTGGTCAACGCCGATATGCCGGGCGAT 5935 >seq2884985 Length=308 Score = 87.8 bits (96), Expect = 4e-13 Identities = 167/244 (68%), Gaps = 14/244 (6%) Strand=Plus/Minus Query 16798 CGCGGGGATGGGTATCGGCGTGGAGAATACGCCATCCGGCATGCAGTCGCAGGTTATCTT 16857 |||||| || || | || ||||||| | | |||| ||||||||||| | ||| | Sbjct 291 CGCGGGTATCGGGCTTGGGTTGGAGAACGGGTCGGGCGGCCTGCAGTCGCAGTTCATCAT 232 Query 16858 CCTGGCTGATCGCTTCGCCGTCACCACGGCA-GCCGGAAATAGCGTGGCTTTGCCGTTTG 16916 | || || || |||||| || |||| ||||| | |||| || |||| Sbjct 231 CGACGCCGACCGGTTCGCCATCG----GGCAAGCCGGCAT---CGTG------CCCTTTG 185 Query 16917 TGATCCAGAATGGACAGACATTCATCCGGGCCAGTTTCATCCAGGACGGCACTATCAGCA 16976 | | ||| ||| ||||| ||||| | |||||||||||||||||| |||| || Sbjct 184 CGGTACAGGGTGGGCAGACTTTCATTAAATCGGCTTTCATCCAGGACGGCACGATCACCA 125 Query 16977 ACGCAAAGATTGGTAATTTTATCCAGTCGAACAATTATGTTGCTGGTTCTGCTGGCTGGA 17036 |||| ||||| || || | |||||||| || || || | | ||| |||||||||| Sbjct 124 ACGCCAAGATCGGCAACTACATCCAGTCCAATAACTACGACCCAGGTAAGGCTGGCTGGA 65 Query 17037 AGCT 17040 |||| Sbjct 64 AGCT 61 >seq347631 Length=610 Score = 80.6 bits (88), Expect = 6e-11 Identities = 75/93 (81%), Gaps = 2/93 (2%) Strand=Plus/Minus Query 14327 AAAATCGGCGACACGATGATGCT-GCAGAGCTTCACCGAGGTGATTGATGCCAAACTGCG 14385 |||||| |||||||||| | | || | ||||||| |||||||| || ||||| | || Sbjct 530 AAAATCTCCGACACGATGCAGATTGCCG-GCTTCACAGAGGTGATCGACGCCAAGATCCG 472 Query 14386 CTACCCGAACACCGCGCTGCTCTACGTCGAATT 14418 ||||||||||||||| |||||||| |||| || Sbjct 471 TTACCCGAACACCGCGTTGCTCTACATCGAGTT 439 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 119362771091622