Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09]
3,088,511 sequences; 2,785,377,831 total letters
Query= NC_019710.1
Length=40710
Score E
Sequences producing significant alignments: (Bits) Value
seq3088379 1088 0.0
seq3087926 122 2e-23
seq3087822 114 3e-21
seq3088057 96.9 9e-16
seq3088451 84.2 5e-12
seq347631 80.6 7e-11
>seq3088379
Length=10556
Score = 1088 bits (1206), Expect = 0.0
Identities = 2153/3171 (68%), Gaps = 54/3171 (2%)
Strand=Plus/Plus
Query 2066 TCGACGATTTCATTTTCCGACCGCTGAGCATGTGATGGAAGAACCTAAATACACGATTGA 2125
||||||| ||| | | | ||||| ||||||||| |||| ||| | | |||| || ||
Sbjct 2099 TCGACGACTTCCTCTCCAGACCGATGAGCATGTAATGGCAGATACCGACTACAGCATCGA 2158
Query 2126 CCTGCGAACCAATAACGGCTGGTGGGCAAGGCTGAAGTCCTGGTTTGTCGGCGGGCGTTT 2185
|||||| || | | ||||| | || | || ||||||||||| || |
Sbjct 2159 CCTGCGCACGCGCAGTCCATTCTGGGCGCGTATGGCGAGCTTCTTTGTCGGCGGCCGCCT 2218
Query 2186 AGTCACCCCAAATCAGGGCTCACAGACGGGGCCTGTTTCGGCCCACGGATACCTGGGCGA 2245
||||| || | | || |||||||| || || || || ||||| || |||| ||
Sbjct 2219 GGTCACACCTGAAAAAGGTTCACAGACAGGCCCAGTATCAGCCCAGGGTGTAGTGGGTGA 2278
Query 2246 TTCATCCATTAACGATGAACGGATACTGCAAATTTCGACTGTGTGGCGCT-GCGTGAGCC 2304
||| | | |||||||| || || || || |||| |||| |||| ||||| | |
Sbjct 2279 TTCGGTCGTAAACGATGAGCGCTCGCTCCAGATCGCGACCGTGTT-CGCTTGCGTGCGGC 2337
Query 2305 TGATTTCAACGCTCACGGCATGCTTACCGCTTGATGTCTTCGAAAC-AGACCAGAATGAC 2363
| || || | | || || ||| | || || || || ||| |||| | | ||| |||
Sbjct 2338 TTATCTCCAGCGTGACAGCTTGCATGCCACTGGACGTTTTCCAAACCAAAGGCGAA-GAC 2396
Query 2364 AACCGTAAAAAAGTGGATTTGAGCAATCCACTGGCGCGACTGCTGCGCTACTCACCGAAT 2423
| ||||| || | || || || ||||||||||| || ||| || ||
Sbjct 2397 AGG-GTAAAG--GTCGGGCTGGATAACCCGCTGGCGCGACTCCTTAAGTACCGCCCCAAC 2453
Query 2424 CAGTACATGACCGCCCAAGAATTCAGGGAGGCCATGACGATGCAGCTCTGTTTCTACGGT 2483
| | |||||| ||| || || | | ||||||||| |||||||| || | |||||
Sbjct 2454 GACTTCATGACTGCCTTTGATTTTCGTGTGGCCATGACTATGCAGCTTTGCTATTACGGC 2513
Query 2484 AACGCATATGCACTTGTGGACCGCAACAGCGCAGGTGACGTGATCAGCCTACTCCCGCTT 2543
|| || || || || | || ||||| | || || ||||| ||||| ||| | |||||
Sbjct 2514 AATGCCTACGCGCTGATTGAGCGCAATGGGGCTGGGGACGTAATCAGTCTAGTGCCGCTC 2573
Query 2544 CAGTCTGCCAATATGGATGTGAAACTCGTCGGaaaaaaaGTGGTTTATCGCTATCAACGC 2603
||||| || |||||||| | | || || | ||||| || |||| |||
Sbjct 2574 ATGTCTGTGAACATGGATGTTCGCTTGGAGGGTAAGCGGATCGTTTACCGATATCGCCGC 2633
Query 2604 GACAGCGAATACGCCGACTTTTCGCAGAAAGAGATTTTTCACCTTAAAGGCTTCGGATTC 2663
|||| | | ||||| || || ||| | || ||||||||||| || || || || ||
Sbjct 2634 GACACCAAGTACGCAGATTTCAAGCAAAGCGATATTTTTCACCTGAAGGGTTTTGGTTTT 2693
Query 2664 ACCGGGCTTGTAGGCCTGTCACCCATTGCTTTTGCCTGTAAATCGGCAGGTGTGGCAGTT 2723
| ||| || || ||||| || || |||||||| || || | || ||||| || |||
Sbjct 2694 AACGGCCTGGTTGGCCTTTCGCCGATTGCTTTCGCAGCGAAGACCGCCGGTGTAGCCGTT 2753
Query 2724 GCGATGGAGGACCAGCAGCGAGATTTCTTTGCCAACGGCGCCAAGTCTCCGCAAATCCTC 2783
|||||||| || |||||||| || || | ||||||||| |||||||| |||||| | ||
Sbjct 2754 GCGATGGAAGATCAGCAGCGCGACTTTTATGCCAACGGTGCCAAGTCCCCGCAACTTCTT 2813
Query 2784 TCAACTGGCGA---AAAAGTGCTAACTGAACAGCAGCGCTCCCAGGTCGAAGAGAACTTC 2840
|| || || ||| || || | | | ||||| | || ||||| ||||| |||
Sbjct 2814 ATGACAGGGGATGGAAAGGTTCTCAACAAGGATCAGCGGGCGCAAGTCGAGGAGAATTTC 2873
Query 2841 AAAGAGATCGCCGGCGGCCCGGTaaaaaaaCGCCTCTGGATTCTGGAAGCGGGTTTTTCT 2900
|| ||||| ||||||| || || || || || |||||||| |||| | |||||| |
Sbjct 2874 AAGGAGATATCCGGCGGGCCAGTCAAGAAGCGTCTCTGGATCTTGGAGGGAGGTTTTACG 2933
Query 2901 ACATCGGCAATTGGCGTAACTCCGCAGGATGCCGAAATGATGGCGTCCCGAAAATTTCAG 2960
|| ||| || ||||| | ||||| || ||||| | ||||| || |||| || |||
Sbjct 2934 ACCCAGGCCATAGGCGTGAGCCCGCAAGACGCCGAGACAATGGCTGCCAGAAAGTTCCAG 2993
Query 2961 GTAAGTGAACTGGCGCGATTCTTTGGCGTACCGCCTCACCTTGTCGGCGACGTCGAGAAA 3020
|| ||||| |||||||| ||||| ||||| ||||| || || || |||||||| || ||
Sbjct 2994 GTGAGTGAGCTGGCGCGGTTCTTCGGCGTGCCGCCGCATCTGGTGGGCGACGTTGAAAAG 3053
Query 3021 TCAACGAGCTGGGGATCGGGCATCGAGCAGCAGAATCTCGGCTTCCTGCAGTACACCCTG 3080
||||| |||||||| || || |||||||| ||||| || ||||| || |||||| | ||
Sbjct 3054 TCAACCAGCTGGGGGTCAGGTATCGAGCAACAGAACCTGGGCTTTCTCCAGTACGCGCTC 3113
Query 3081 CAGCCCTATATCTCCAGGTGGGAAAACAGCATTCAGCGGTGGCTTATTCCTGCTAAGGAT 3140
| || || | | ||||| | |||||| ||| |||||| | | | ||
Sbjct 3114 GACCCTTACCTTGAAATTTGGGAGGGCTGCATTCTGCGATGGCTTGTAAAGCCGAGCGAC 3173
Query 3141 GTTGGCCGCATTCATGCTGAGCACAACCTCGACGGCCTGCTGAGGGGAGATTCGGCATCC 3200
| || | |||||||||||||||| ||||| ||||||| || || || | ||
Sbjct 3174 CTCGGGGTGTTCCATGCTGAGCACAACCGAGACGGGTTGCTGAGTGGTGACTCAACCGCC 3233
Query 3201 CGCGCTGCCTTTATGAAGGCAATGGGAGAGTCAGGGCTACGCACCATCAACGAGATGCGA 3260
||||| | | || | || || | ||||| | || ||||||| ||
Sbjct 3234 CGCGCGAATTACCTAAAAACGTTGATTGATACCGGGCTGCTGACTCCCAACGAGGGCCGG 3293
Query 3261 CGAACGGACAACCTCCCGCCATTGCCGGGTGGCGATGTGGCAATGCGCCAGTCGCAATAC 3320
||| ||| ||| |||| || ||||| || || | ||||| |||||| ||
Sbjct 3294 CGAGTCAGCAATAGGCCGAAGCTGCCCGGCGGCGACGTCGCCACACGCCAATCGCAAAAC 3353
Query 3321 GTGCCGATC-ACCGATTTAGGAACCAACAAAGAGCCCCGTAA-TAACGGGGCTTAATTTT 3378
|||||| | | | | || | | ||||| ||||| | ||||| ||| ||||
Sbjct 3354 GTGCCGCTTGATCAACTTGGTCA-----AAAGAACCCCGCCCCTGGCGGGGTTTAGTTTT 3408
Query 3379 TATGGGGGC-CGTAATGCCTGAAATCGTAAAAACGCTGTCCTTCGACGAGACAGAAATCA 3437
| ||| | | |||| | | || ||| || || | ||| |||||| ||||||
Sbjct 3409 TCTGGAGCTACCCAATGGCAAATATTCAAAAGACCTTGGCGTTCACCGAGACTCAAATCA 3468
Query 3438 AATTCACCGGTGACGGTAAACAGGGGATTTTTGAAGGCTACGCCTCTGTTTTTAATAACA 3497
| ||| || || || || || | || || || |||||| |||||| | ||
Sbjct 3469 AGTTCTCCTCGGATGGCAAGGTTGGTGTGTTCGAGGGGTACGCCAGTGTTTTCGACGTCA 3528
Query 3498 CCGATTCCGATGGCGACATCATTCTGCCCGGGGCGTTTAAAAACGCGCTGGCGAACCAGA 3557
||| || || ||||||||||| |||||||| || || || || || || | || |
Sbjct 3529 TCGACTCAGACGGCGACATCATCCTGCCCGGCGCCTTCAAGAAGGCTTTGTCTTCGCAAA 3588
Query 3558 CCCGAAAAGTGGCGATGTTTTTTAACCACAGGACGTGGGAACTGCCGGTTGGCAAATGGG 3617
||| |||| | |||||||||||||| ||| | | ||||| ||||| || |||
Sbjct 3589 GCCGCCAAGTCGGCATGTTTTTTAACCATCAGACCTACGGCCTGCCTGTTGGAAAGTGGC 3648
Query 3618 ACAGCCTGGCTGAGGACGAAAAAGGCCTGTATGTGCGCGGTCAACTTACCCCAGGACACA 3677
| ||||| |||||| ||||| || | || | || | || || || ||
Sbjct 3649 AGTCGCTGGCGGAGGACAGCAAAGGACTCTTCGTTGGAGGCGAGCTGACGCCCGGTTTGT 3708
Query 3678 GCGGCGCCGCTGACCTGAAAGCGGCAATGCAGCACGGTACGGTTGAAGGTATGTCGGTTG 3737
| | || ||||| || || ||| | || || || || ||| |||||||||
Sbjct 3709 CGGTCTCCAACGACCTCCGGGCAGCCATGGAACATAAGACCGTCGAGGGTTTGTCGGTTG 3768
Query 3738 GCTTTTCCGTTTCGAAAGACGATTACACCATCATTCCAACAGGCCGCATTTTTAAGAATA 3797
|||| |||| || ||||||||| || |||| || |||||| || | |||
Sbjct 3769 GCTTCACCGTCCTCAAGGACGATTACGCCGTCATCGATACCGGCCGCGCATTCAGCAATG 3828
Query 3798 TCCAGGCTCTGCGCGAAATCAGCGTCTGCACTTTCCCCGCCAACGAACAGGCTGGCATCG 3857
||||||| ||||| || |||||| | ||||| || || ||||| || ||||| ||| |
Sbjct 3829 TCCAGGCCCTGCGAGAGATCAGCATTTGCACCTTTCCTGCCAATGAGCAGGCGACCATTG 3888
Query 3858 CAGCCATGAAAAGTGTCGATGGTATTGAA----ACGATTCGTGATGTGGAGAACTGGCTG 3913
||||||||||| |||| || || || ||||| ||||| ||| | ||||||
Sbjct 3889 ACGCCATGAAAAGC----ATGGAATCGATCAGCACCATTCGCGATGTAGAGCATTGGCTG 3944
Query 3914 AGGGATTCAGTCGGCCTCACCAAATCACAGGCAGTTGGGCTAATTGCCCGGTTTAAGTCA 3973
|||||||| | ||| || | || || || || | || || || |||||| | |||||
Sbjct 3945 AGGGATTCGGCCGGTCTTTCGAAGTCGCAAGCCCTGGGCCTGATAGCCCGGATCAAGTCC 4004
Query 3974 GCGATTCGGAGCGAGTCCGAGGGCGACGGAAACGAAGCACAAATAAACGCTCTGCTTCAG 4033
|| ||||||| || ||||| || | || |||| | ||| | || |
Sbjct 4005 GCAGTTCGGAGTGATTCCGAAGGTGGCG------------AAATCACCGCGATCCTGGAT 4052
Query 4034 AGCATCAAATCTTTCCCTTCTAACTTAGGTAAATAATT-ATGTCTGAACTCGCTCTCATT 4092
||||||| || ||||| ||| |||| || ||| ||||| ||| | || | |||
Sbjct 4053 CGCATCAAGTCATTCCCATCTG---TAGGAAATTAAACCATGTCCGAATTGGCCCAAATT 4109
Query 4093 CAAAAAGCTATCGAAGAATCCCAGCAGAAAATGACCCAGCTTTTCGATGCGCAGAAAGCA 4152
||||| || |||||| | || ||| ||||| |||| ||||| ||||| || |
Sbjct 4110 CAAAAGGCAATCGAAACCGCGCAAACGAACATGACTGAGCTGTTCGAGGCGCAAAAGAAA 4169
Query 4153 GAAATCGAAAGCACAGGCCAGGTTTCCAAACAGTTGCAGTCCGACCTGATGAAAGTACAG 4212
|| ||| ||| ||| | || ||| || | || |||||||| || ||| |||
Sbjct 4170 GAGATCACCGCCACCGGCGAAGTGAGCAAGAAGATTCAAACCGACCTGCAGACAGTGCAG 4229
Query 4213 GAAGAGCTGACCAAATCCGGCACTCGCCTCTTCGATCTGGAACAGAAACTGGCATCCGGC 4272
|| || |||| | ||||| | ||| | |||||||| || ||| || || ||||
Sbjct 4230 GACGAACTGAAAACGGCCGGCTCCCGCTTGTTCGATCTCGAGTCGAAGCTTGCCGGCGGC 4289
Query 4273 GCT---GAGAATCCTGGTGAGAAGAAATCCTTCTCTGAACGGGCTGCTGAAGAGCTTATT 4329
|| || || |||| | |||||||| ||| |||| ||||| || ||||| || |
Sbjct 4290 ACTCTCGATAACCCTGAAGCCAAGAAATCGTTCGCTGAGCGGGCGGCCGAAGATCTGAAG 4349
Query 4330 AAGTCATGGGACGG---TAAACAGGGCACCTTTGGCGCTAAAACGTTTAACAAGTCACTA 4386
||| ||| |||| || |||| | | || | | || | |||| | ||
Sbjct 4350 AAGGGCTGGAACGGCTCTACGTCCGGCAAAGTGGACGTGATTAGCTTCAGCAAGGCTCTC 4409
Query 4387 GGCAGTGACGCTGATTCGGCTGGCTCACTGATCCAGCCTATGCAGATCCCAGGCATCATC 4446
||| | ||| | ||| ||||| | || ||||||| ||||| ||| ||||| ||
Sbjct 4410 GGCGCAGGCGCCGCTTCTGCTGGTGCGTTGGTCCAGCCCCAGCAGAACCCCGGCATTCTC 4469
Query 4447 ATGCCAGGCCTGCGCCGTCTTACCATTCGTGATCTGCTGGCTCAGGGCCGC---ACTTCC 4503
||||| ||||||||||| || ||||| ||||| |||||||| || || ||| ||||||
Sbjct 4470 ATGCCCGGCCTGCGCCGGCTGACCATCCGTGACCTGCTGGCGCAAGGTCGCACGACTTCC 4529
Query 4504 AGTAACGCTCTGGAATATGTGCGTGAAGAGGTGTTTACCAATAACGCCGACGTGGTGGCA 4563
|||| | || || ||||| || | || || | ||| | ||||| ||| ||
Sbjct 4530 ---GACGCCATCGAGTACGTGCGCGAGAACGTATTCATCAACAGCGCCGCTCCGGTCGCC 4586
Query 4564 GAGAAAGCACTGAAGCCAGAATCGGATATCACCTTCAGCAAACAAACCGCGAACGTGAAG 4623
||| | |||||||| || || | | ||||||| ||| |||| || ||||| |||
Sbjct 4587 GAGGGCACGCTGAAGCCCGAGTCCAACCTGACCTTCACCAAGGAAACGGCCAACGTCAAG 4646
Query 4624 ACCATCGCGCACTGGGTGCAGGCATCACGTCAGGTGATGGATGATGCGCCAATGCTTCAG 4683
|| | || |||||| | ||||| || || ||| | ||| ||| || || ||||| |
Sbjct 4647 ACGCTGGCTCACTGGATTCAGGCTTCTCGCCAGATCATGTCTGACGCTCCGATGCTGGAA 4706
Query 4684 TCCTACATTAACAACCGCCTCATGTACGGCCTGGCACTGAAGGAAGAGGGCCAGCTGCTG 4743
||||| | ||| ||||| ||| || |||| || ||||| || ||||| ||
Sbjct 4707 TCCTATGTGAACGGTCGCCTGTTGTTTGGTCTGGACTTGGTCGAAGAAGGGCAGCTTCTC 4766
Query 4744 AACGGCGACGGTACCGGGGATAACCTGGAAGGGCTGAACAAAGTGGCAACCGCCTATGAC 4803
|||||||| || ||||| || |||||| || ||||||||||| || |||||||| |||
Sbjct 4767 AACGGCGATGGCACCGGTGACAACCTGATCGGCCTGAACAAAGTCGCGACCGCCTACGAC 4826
Query 4804 ACCTCGCTGAATGCCACCGGCGACACCCGCGCTGACATTATCGCTCACGCTATTTATCAG 4863
|| |||| ||||||||||||||||| ||||||||| || || ||||| || | |||
Sbjct 4827 ACTACGCTCAATGCCACCGGCGACACTCGCGCTGACCAGATTGCACACGCGATCTTCCAG 4886
Query 4864 GTGACCGAGTCTGAGTTCAGCGCTTCCGGTATCGTCCTGAACCCGCGCGACTGGCACAAC 4923
| ||| || |||||| ||||| || | || ||||||| |||||||||||| |
Sbjct 4887 ACCAGCGAATCCGAGTTCGAGGCTTCGGGCCTGATCTTGAACCCCCGCGACTGGCACGCC 4946
Query 4924 ATCGCGTTGCTGAAAGACAATGAAGGCCGCTATATCTTCGGTGGTCCTCAGGCATTCACC 4983
|||||| ||||||||||| ||| || || || ||||| || || ||| ||| ||| ||
Sbjct 4947 ATCGCGCTGCTGAAAGACGGTGATGGTCGTTACATCTTTGGCGGCCCTGCGGCGTTCGCC 5006
Query 4984 AGTAACATCATGTGGGGCTTGCCAGTGGTTCCGACTAAGGCGCAGGCCGCCGGCACCTTT 5043
|| |||||||||| | || || ||| | || || || ||||| || || ||
Sbjct 5007 GCCAAGGTCATGTGGGGGCTTCCTGTTGTTGCCACCAAAGCCCAGGCACAGGGAACTTTC 5066
Query 5044 ACCGTAGGCGGTTTCGATATGGCCTCACAGGTCTGGGATCGCATGGATGCCACCGTGGAA 5103
|| || ||||| ||||| ||||| || ||| ||||||| |||||||| || || | ||
Sbjct 5067 ACTGTTGGCGGCTTCGACATGGCTTCGCAGATCTGGGACCGCATGGACGCGACTATCGAG 5126
Query 5104 GTTAGCCGTGAAGACCGCGATAACTTCGTGAAAAACATGCTGACCATCCTGTGCGAAGAG 5163
| ||| | || ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 5127 ATCAGCAACCAGGATCGCGACAACTTCGTGAAAAACATGCTGACCATCCTGTGCGAAGAG 5186
Query 5164 CGTCTGGCGCTGGCGCATTATCGCCCGACAGCAATCATCAAGGGCACCTTC 5214
|| |||||| | | || ||||| || || ||||||||||| ||| | |||
Sbjct 5187 CGCCTGGCGGTTACCCACTATCGTCCTACCGCAATCATCAAAGGCGCTTTC 5237
>seq3087926
Length=6391
Score = 122 bits (134), Expect = 2e-23
Identities = 322/484 (67%), Gaps = 12/484 (2%)
Strand=Plus/Minus
Query 11919 GATCCGTCACTGGATGAATGCAACGGAACGCTGACGGCCTGCAAACTTCGGTTCGGTGAA 11978
|||||| | |||| | ||||| || ||| || ||||||| | || ||||| ||
Sbjct 5396 GATCCGGCCAAGGATCAGTGCAAGGGCTGCCTGTCGTCCTGCAAGTTGCGATTCGGCGAG 5337
Query 11979 AACAACGAACTCTCGTTTGGTGGGTTCCCGGGTACGTCGCTGAT---CAGGAGTTGA-TA 12034
||||||||||| || ||||| || ||||| | ||| || || | |||| ||| |
Sbjct 5336 AACAACGAACTGTCCTTTGGCGGATTCCCCGCCGTGTCTCTCATTGCCCGGAGCTGACCA 5277
Query 12035 TGCGTCAGAAAACCATCGATGCGATTATGGCGCATGCTGCAGCTGAATATCCTCGTGAGT 12094
|||| || | | ||| | || || ||||||||| || | || ||||| || ||||
Sbjct 5276 TGCGCAAGCACATCATTGCGGCCATCCAGGCGCATGCGGCGACGGAGTATCCGCGAGAGT 5217
Query 12095 GTTGCGGCGTGGTGGCGCAAAAGAGCCGGGTAGAGAAATATTTTCCATGTAGTAACCTCG 12154
| |||||| || || | | |||| | |||| || || || || | ||| | |
Sbjct 5216 GCTGCGGCCTGCTGTTGGCCGTGGGCCGCGCGCAGAAGTACTTCCCGTGCCGGAACATAG 5157
Query 12155 CTACCGAGCCGACAGAACATTTTCACCTGTCGCCAGAAGACTATGCAGCTGCTGAGGACT 12214
| | ||||||| ||| | || | || || || ||||| || || || || ||||
Sbjct 5156 CCAAGGAGCCGAACGAAGAGTTCCGGCTTGACCCCGAGGACTACGCCGCGGCGGAAGACT 5097
Query 12215 GGGGTACGGTGATCGCCATCGTTCACAGTCACCCTGACGCCACTACGCAGCCGAGCGAAC 12274
||| |||||||| |||||| ||| ||||| |||||||| | |||| | | ||
Sbjct 5096 TGGGCGAGGTGATCGGCATCGTCCACTCGCACCCGGACGCCACCA-GCAG--GCCCTCAC 5040
Query 12275 TGGATAA---AGCGCAATGCGACGCAACGCTTTTACCCTGGCATATTGTGAGCTGGCCGG 12331
| || | || || || || ||| ||| || ||||| || || ||||| |
Sbjct 5039 CGCATGACTTGGCCATGTGTGAGGCCACGGCTTTGCCATGGCACATCCTGTCTTGGCCCG 4980
Query 12332 AGGGGGATTTACGCACCATCCAGCC-GCGCGGAGAACTGCCACTGCTGGAGCGTCCGTTT 12390
|||| || | ||||| || ||| ||| | || || ||| ||||| |||| |||||
Sbjct 4979 AGGGTGACTGGCGCACGATTACGCCGGCGGGTAGCAC-GCCGCTGCTCAAGCGCCCGTTC 4921
Query 12391 GTGC 12394
||||
Sbjct 4920 GTGC 4917
>seq3087822
Length=6084
Score = 114 bits (126), Expect = 3e-21
Identities = 301/452 (67%), Gaps = 12/452 (3%)
Strand=Plus/Minus
Query 11949 CTGACGGCCTGCAAACTTCGGTTCGGTGAAAACAACGAACTCTCGTTTGGTGGGTTCCCG 12008
||| || ||||||| | || ||||| |||||||||||||| || || ||||| |||||
Sbjct 2082 CTGTCGTCCTGCAAGTTGCGCTTCGGCGAAAACAACGAACTGTCCTTCGGTGGATTCCCC 2023
Query 12009 GGTACGTCGCTGA---TCAGGAGTTGA-TATGCGTCAGAAAACCATCGATGCGATTATGG 12064
| || |||| || |||| ||| |||||| || | | ||| | || ||| ||
Sbjct 2022 GCCGTTTCCCTGATTGTCCGGAGCTGACTATGCGCAAGCACATCATTGCCGCTATTCAGG 1963
Query 12065 CGCATGCTGCAGCTGAATATCCTCGTGAGTGTTGCGGCGTGGTGGCGCAAAAGAGCCGGG 12124
|||| || || || |||||||| || || || ||||| || || | | |||| |
Sbjct 1962 CGCACGCGGCGGCGGAATATCCGCGCGAATGCTGCGGGCTGCTGCTGGCCGTGGGCCGCG 1903
Query 12125 TAGAGAAATATTTTCCATGTAGTAACCTCGCTACCGAGCCGACAGAACATTTTCACCTGT 12184
|||| || || || || | ||| |||| || ||||||| ||| | || | ||
Sbjct 1902 CTCAGAAGTACTTCCCGTGCCGGAACATCGCCACGGAGCCGAGCGAAGAGTTCAAGCTCG 1843
Query 12185 CGCCAGAAGACTATGCAGCTGCTGAGGACTGGGGTACGGTGATCGCCATCGTTCACAGTC 12244
|| || | ||| || || || ||||||| ||| |||||||| || || ||| |
Sbjct 1842 ATCCCGAGGGCTACGCTGCGGCAGAGGACTTGGGCGAGGTGATCGGTATAGTCCACTCAC 1783
Query 12245 ACCCTGACGCCACTACGCAGCC---GAGCGAACTGGATAAAGCGCAATGCGACGCAACGC 12301
|||| ||||| || | || ||| | || || || || || || || |||
Sbjct 1782 ACCCGGACGCAACCA-GCCGCCCATCACCGCAC--GACCTTGCCATGTGTGAGGCCACGG 1726
Query 12302 TTTTACCCTGGCATATTGTGAGCTGGCCGGAGGGGGATTTACGCACCATCCAGCC-GCGC 12360
| |||||||||||| | ||||| ||||| || | ||||| ||| ||| ||
Sbjct 1725 CCGTGCCCTGGCATATTCTCTCGTGGCCCGAGGGCGACATGCGCACGATCACGCCAACGG 1666
Query 12361 GGAGAACTGCCACTGCTGGAGCGTCCGTTTGT 12392
| | || ||| ||||| |||| ||||| ||
Sbjct 1665 GCACCAC-GCCGCTGCTCAAGCGGCCGTTCGT 1635
>seq3088057
Length=7030
Score = 96.9 bits (106), Expect = 9e-16
Identities = 201/297 (68%), Gaps = 12/297 (4%)
Strand=Plus/Plus
Query 14660 AACCCTGCGTGGATTTTTTACGACCTGGTTGTTT---CTGACCGGTTCGGCCTTGGGCAC 14716
|||||||||||| | ||||| |||||||| | || || | |||||| || |
Sbjct 5648 AACCCTGCGTGGGTGTTTTATGACCTGGTGCTGCACCCTTAC---TACGGCCTCGGCGAT 5704
Query 14717 CGTTTGACCGCTGCGAATATTGATAAATGGACGCTTTATCAGGTTGCTCAGTATTGTGAT 14776
|| | || ||| ||||| ||| ||||||||| | || || || || |||
Sbjct 5705 CGCATCGATGCCACGATGGTTGATCGCTGGTCGCTTTATCGCATCGCGCAATACTGCGAT 5764
Query 14777 CAGATGGTACCAGACGGCAAAGGGGGCAATGGTACAGAACCACGTTATACCTGCAACGTG 14836
|||||||| || || || ||||| ||| ||| || || || | |||||||||| ||
Sbjct 5765 CAGATGGTGCCGGATGGAAAAGGCGGC-ATG-----GAGCCGCGCTTTACCTGCAACCTG 5818
Query 14837 TACATTCAGGACCGGAACGACGCCTACACAGTCCTGCGTGATTTTGCCGCTATCTTCCGT 14896
||| | || | | | ||| |||||| | || |||| ||| | || | ||||| |
Sbjct 5819 TACCTGCAAAAGCAGGCCGAGGCCTACGCGGTGCTGCAGGATCTGGCATCGATCTTTCAC 5878
Query 14897 GGCATGACCTACTGGGGCGGGGATCAGATTGTGGCCCTGGCTGACATGCCGCGCGAT 14953
|| || ||||||||| ||| ||||| |||| | || || |||||| |||||
Sbjct 5879 GGTCTGGCCTACTGGGACGGCAGCCAGATCGTGGTCAACGCCGATATGCCGGGCGAT 5935
>seq3088451
Length=13260
Score = 84.2 bits (92), Expect = 5e-12
Identities = 67/81 (83%), Gaps = 0/81 (0%)
Strand=Plus/Plus
Query 14451 GCTTCACCGAGGTGATTGACGCCAAACTGCGCTACCCGAACACCGCGCTGCTCTACGTCG 14510
||| |||| ||||||| ||||| || ||||||||||| |||||||||||||| | |||||
Sbjct 11818 GCTACACCCAGGTGATCGACGCAAAGCTGCGCTACCCAAACACCGCGCTGCTGTTCGTCG 11877
Query 14511 AATTCGACTCAAGCCAGTTCA 14531
| |||||| | |||||||
Sbjct 11878 AGTTCGACGCCGAGCAGTTCA 11898
>seq347631
Length=610
Score = 80.6 bits (88), Expect = 7e-11
Identities = 75/93 (81%), Gaps = 2/93 (2%)
Strand=Plus/Minus
Query 14423 AAGATCGGCGACACGATGATGCT-GCAGAGCTTCACCGAGGTGATTGACGCCAAACTGCG 14481
|| ||| |||||||||| | | || | ||||||| |||||||| |||||||| | ||
Sbjct 530 AAAATCTCCGACACGATGCAGATTGCCG-GCTTCACAGAGGTGATCGACGCCAAGATCCG 472
Query 14482 CTACCCGAACACCGCGCTGCTCTACGTCGAATT 14514
||||||||||||||| |||||||| |||| ||
Sbjct 471 TTACCCGAACACCGCGTTGCTCTACATCGAGTT 439
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 125376995063104
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