Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09] 3,088,511 sequences; 2,785,377,831 total letters Query= NC_019719.1 Length=41528 Score E Sequences producing significant alignments: (Bits) Value seq3088379 1086 0.0 seq3087926 127 5e-25 seq3087822 120 8e-23 seq3088057 96.9 9e-16 seq2884985 93.3 1e-14 seq3088451 84.2 6e-12 seq347631 80.6 7e-11 >seq3088379 Length=10556 Score = 1086 bits (1204), Expect = 0.0 Identities = 2155/3172 (68%), Gaps = 56/3172 (2%) Strand=Plus/Plus Query 2025 TCGACGACTTCATTTTCCGACCGCTGAGCATGTGATGGAAGAACCTAAATACACGATTGA 2084 ||||||||||| | | | ||||| ||||||||| |||| ||| | | |||| || || Sbjct 2099 TCGACGACTTCCTCTCCAGACCGATGAGCATGTAATGGCAGATACCGACTACAGCATCGA 2158 Query 2085 CCTGCGAACCAATAACGGCTGGTGGGCAAGGCTGCAGTCCTGGTTTGTCGGCGGGCGTTT 2144 |||||| || | | ||||| | || | || ||||||||||| || | Sbjct 2159 CCTGCGCACGCGCAGTCCATTCTGGGCGCGTATGGCGAGCTTCTTTGTCGGCGGCCGCCT 2218 Query 2145 AGTCACCCCAAATCAGGGCTCACAGACGGGGCCTGTTTCGGCCCACGGACACCTGGGCGA 2204 ||||| || | | || |||||||| || || || || ||||| || |||| || Sbjct 2219 GGTCACACCTGAAAAAGGTTCACAGACAGGCCCAGTATCAGCCCAGGGTGTAGTGGGTGA 2278 Query 2205 TTCATCCATTAACGATGAACGGATACTGCAAATTTCGACTGTGTGGCGCT-GCGTGAGCC 2263 ||| | | |||||||| || || || || |||| |||| |||| ||||| | | Sbjct 2279 TTCGGTCGTAAACGATGAGCGCTCGCTCCAGATCGCGACCGTGTT-CGCTTGCGTGCGGC 2337 Query 2264 TGATTTCAACGCTCACGGCATGCTTACCGCTTGATGTCTTCGAAAC-AGACCAGAATGAC 2322 | || || | | || || ||| | || || || || ||| |||| | | ||| ||| Sbjct 2338 TTATCTCCAGCGTGACAGCTTGCATGCCACTGGACGTTTTCCAAACCAAAGGCGAA-GAC 2396 Query 2323 AACCGTAAAAAAGTGGATTTGAGCAATCCACTGGCGCGACTGCTGCGCTACTCACCGAAT 2382 | ||||| || | || || || ||||||||||| || ||| || || Sbjct 2397 AGG-GTAAAG--GTCGGGCTGGATAACCCGCTGGCGCGACTCCTTAAGTACCGCCCCAAC 2453 Query 2383 CAGTACATGACCGCCCAAGAATTCAGGGAGGCCATGACGATGCAGCTCTGTTTCTACGGT 2442 | | |||||| ||| || || | | ||||||||| |||||||| || | ||||| Sbjct 2454 GACTTCATGACTGCCTTTGATTTTCGTGTGGCCATGACTATGCAGCTTTGCTATTACGGC 2513 Query 2443 AACGCATATGCACTTGTGGACCGCAACAGCGCAGGTGACGTGATCAGCCTTCTCCCGCTT 2502 || || || || || | || ||||| | || || ||||| ||||| || | ||||| Sbjct 2514 AATGCCTACGCGCTGATTGAGCGCAATGGGGCTGGGGACGTAATCAGTCTAGTGCCGCTC 2573 Query 2503 CAGTCTGCCAATATGGATGTGAAGCTCGTCGGaaaaaaaG-TGGTTTATCGCTATCAACG 2561 ||||| || |||||||| ||| | || || | | ||||| || |||| || Sbjct 2574 ATGTCTGTGAACATGGATGTTC-GCTTGGAGGGTAAGCGGATCGTTTACCGATATCGCCG 2632 Query 2562 CGACAGCGAATACGCCGACTTTTCGCAGAAAGAGATTTTTCATCTTAAAGGCTTCGGATT 2621 ||||| | | ||||| || || ||| | || |||||||| || || || || || || Sbjct 2633 CGACACCAAGTACGCAGATTTCAAGCAAAGCGATATTTTTCACCTGAAGGGTTTTGGTTT 2692 Query 2622 CACCGGGCTTGTAGGCCTGTCACCCATTGCTTTTGCCTGTAAATCGGCAGGTGTGGCAGT 2681 | ||| || || ||||| || || |||||||| || || | || ||||| || || Sbjct 2693 TAACGGCCTGGTTGGCCTTTCGCCGATTGCTTTCGCAGCGAAGACCGCCGGTGTAGCCGT 2752 Query 2682 TGCGATGGAGGACCAGCAGCGAGATTTCTTTGCCAACGGCGCCAAGTCTCCGCAAATCCT 2741 ||||||||| || |||||||| || || | ||||||||| |||||||| |||||| | || Sbjct 2753 TGCGATGGAAGATCAGCAGCGCGACTTTTATGCCAACGGTGCCAAGTCCCCGCAACTTCT 2812 Query 2742 CTCAACTGGCGA---AAAAGTGCTAACTGAACAGCAGCGCTCCCAGGTCGAAGAGAACTT 2798 || || || ||| || || | | | ||||| | || ||||| ||||| || Sbjct 2813 TATGACAGGGGATGGAAAGGTTCTCAACAAGGATCAGCGGGCGCAAGTCGAGGAGAATTT 2872 Query 2799 CAAAGAGATCGCCGGCGGCCCGGTaaaaaaaCGCCTCTGGATTCTGGAAGCGGGTTTTTC 2858 ||| ||||| ||||||| || || || || || |||||||| |||| | |||||| | Sbjct 2873 CAAGGAGATATCCGGCGGGCCAGTCAAGAAGCGTCTCTGGATCTTGGAGGGAGGTTTTAC 2932 Query 2859 TACATCGGCAATTGGCGTAACTCCGCAGGATGCCGAAATGATGGCGTCCCGAAAATTTCA 2918 || ||| || ||||| | ||||| || ||||| | ||||| || |||| || || Sbjct 2933 GACCCAGGCCATAGGCGTGAGCCCGCAAGACGCCGAGACAATGGCTGCCAGAAAGTTCCA 2992 Query 2919 GGTAAGTGAACTGGCGCGATTCTTTGGCGTACCGCCTCACCTTGTCGGCGACGTCGAGAA 2978 ||| ||||| |||||||| ||||| ||||| ||||| || || || |||||||| || || Sbjct 2993 GGTGAGTGAGCTGGCGCGGTTCTTCGGCGTGCCGCCGCATCTGGTGGGCGACGTTGAAAA 3052 Query 2979 ATCAACGAGCTGGGGATCGGGCATCGAGCAGCAGAATCTCGGCTTCCTGCAGTACACCCT 3038 ||||| |||||||| || || |||||||| ||||| || ||||| || |||||| | || Sbjct 3053 GTCAACCAGCTGGGGGTCAGGTATCGAGCAACAGAACCTGGGCTTTCTCCAGTACGCGCT 3112 Query 3039 GCAGCCCTATATCTCCAGGTGGGAAAACAGCATTCAGCGGTGGCTTATTCCTGCTAAGGA 3098 | || || | | ||||| | |||||| ||| |||||| | | | || Sbjct 3113 CGACCCTTACCTTGAAATTTGGGAGGGCTGCATTCTGCGATGGCTTGTAAAGCCGAGCGA 3172 Query 3099 TGTTGGCCGCATTCATGCTGAGCACAACCTCGACGGCCTGCTGAGGGGCGATTCGGCATC 3158 | || | |||||||||||||||| ||||| ||||||| || || || | | Sbjct 3173 CCTCGGGGTGTTCCATGCTGAGCACAACCGAGACGGGTTGCTGAGTGGTGACTCAACCGC 3232 Query 3159 CCGCGCTGCCTTTATGAAGGCAATGGGAGAGGCAGGGCTACGCACCATCAACGAGATGCG 3218 |||||| | | || | || || | ||||| | || ||||||| || Sbjct 3233 CCGCGCGAATTACCTAAAAACGTTGATTGATACCGGGCTGCTGACTCCCAACGAGGGCCG 3292 Query 3219 ACGAACGGACAACCTCCCGCCATTGCCGGGTGGCGATGTGGCAATGCGCCAGTCGCAATA 3278 ||| ||| ||| |||| || ||||| || || | ||||| |||||| | Sbjct 3293 GCGAGTCAGCAATAGGCCGAAGCTGCCCGGCGGCGACGTCGCCACACGCCAATCGCAAAA 3352 Query 3279 CGTGCCGATC-ACCGATTTAGGAACCAACAAAGAGCCCCGTAA-TAACGGGGCTTAATTT 3336 ||||||| | | | | || | | ||||| ||||| | ||||| ||| ||| Sbjct 3353 CGTGCCGCTTGATCAACTTGGTCA-----AAAGAACCCCGCCCCTGGCGGGGTTTAGTTT 3407 Query 3337 TTATGGGGGC-CGTAATGCCTGAAATCGTAAAAACGCTGTCCTTCGACGAGACAGAAATC 3395 || ||| | | |||| | | || ||| || || | ||| |||||| ||||| Sbjct 3408 TTCTGGAGCTACCCAATGGCAAATATTCAAAAGACCTTGGCGTTCACCGAGACTCAAATC 3467 Query 3396 AAATTCACCGGTGACGGTAAACAGGGGATTTTTGAAGGCTACGCCTCTGTTTTTAATAAC 3455 || ||| || || || || || | || || || |||||| |||||| | | Sbjct 3468 AAGTTCTCCTCGGATGGCAAGGTTGGTGTGTTCGAGGGGTACGCCAGTGTTTTCGACGTC 3527 Query 3456 ACCGATTCCGATGGCGACATCATTCTGCCCGGGGCGTTTAAAAACGCGCTGGCGAACCAG 3515 | ||| || || ||||||||||| |||||||| || || || || || || | || Sbjct 3528 ATCGACTCAGACGGCGACATCATCCTGCCCGGCGCCTTCAAGAAGGCTTTGTCTTCGCAA 3587 Query 3516 ACCCGAAAAGTGGCGATGTTTTTTAACCACAGGACGTGGGAACTGCCGGTTGGCAAATGG 3575 | ||| |||| | |||||||||||||| ||| | | ||||| ||||| || ||| Sbjct 3588 AGCCGCCAAGTCGGCATGTTTTTTAACCATCAGACCTACGGCCTGCCTGTTGGAAAGTGG 3647 Query 3576 GACAGCCTGGCTGAGGACGAAAAAGGCCTGTATGTGCGCGGTCAACTTACCCCAGGACAC 3635 | ||||| |||||| ||||| || | || | || | || || || || Sbjct 3648 CAGTCGCTGGCGGAGGACAGCAAAGGACTCTTCGTTGGAGGCGAGCTGACGCCCGGTTTG 3707 Query 3636 AGCGGCGCCGCTGACCTGAAAGCGGCAATGCAGCACGGTACGGTTGAAGGTATGTCGGTT 3695 | | || ||||| || || ||| | || || || || ||| |||||||| Sbjct 3708 TCGGTCTCCAACGACCTCCGGGCAGCCATGGAACATAAGACCGTCGAGGGTTTGTCGGTT 3767 Query 3696 GGCTTTTCCGTTTCGAAAGACGATTACACCATCATTCCAACAGGCCGCATTTTTAAGAAT 3755 ||||| |||| || ||||||||| || |||| || |||||| || | ||| Sbjct 3768 GGCTTCACCGTCCTCAAGGACGATTACGCCGTCATCGATACCGGCCGCGCATTCAGCAAT 3827 Query 3756 ATCCAGGCTCTGCGCGAAATCAGCGTCTGCACTTTCCCCGCCAACGAACAGGCTGGCATC 3815 ||||||| ||||| || |||||| | ||||| || || ||||| || ||||| ||| Sbjct 3828 GTCCAGGCCCTGCGAGAGATCAGCATTTGCACCTTTCCTGCCAATGAGCAGGCGACCATT 3887 Query 3816 GCAGCCATGAAAAGTGTCGATGGTATTGAA----ACGATTCGTGATGTGGAGAACTGGCT 3871 | ||||||||||| |||| || || || ||||| ||||| ||| | ||||| Sbjct 3888 GACGCCATGAAAAGC----ATGGAATCGATCAGCACCATTCGCGATGTAGAGCATTGGCT 3943 Query 3872 GAGGGATTCAGTCGGCCTCACCAAATCACAGGCAGTTGGGCTAATTGCCCGGTTTAAGTC 3931 ||||||||| | ||| || | || || || || | || || || |||||| | ||||| Sbjct 3944 GAGGGATTCGGCCGGTCTTTCGAAGTCGCAAGCCCTGGGCCTGATAGCCCGGATCAAGTC 4003 Query 3932 AGCGATTCGGAGCGAGTCCGAGGGCGACGGAAACGAAGCACAAATAAACGCTCTGCTTCA 3991 || ||||||| || ||||| || | || |||| | ||| | || | Sbjct 4004 CGCAGTTCGGAGTGATTCCGAAGGTGGCG------------AAATCACCGCGATCCTGGA 4051 Query 3992 GAGCATCAAATCTTTCCCTTCTAACTTAGGTAAATAATT-ATGTCTGAACTCGCTCTCAT 4050 ||||||| || ||||| ||| |||| || ||| ||||| ||| | || | || Sbjct 4052 TCGCATCAAGTCATTCCCATCTG---TAGGAAATTAAACCATGTCCGAATTGGCCCAAAT 4108 Query 4051 TCAAAAAGCTATCGAAGAATCCCAGCAGAAAATGACCCAGCTTTTCGATGCGCAGAAAGC 4110 |||||| || |||||| | || ||| ||||| |||| ||||| ||||| || Sbjct 4109 TCAAAAGGCAATCGAAACCGCGCAAACGAACATGACTGAGCTGTTCGAGGCGCAAAAGAA 4168 Query 4111 AGAAATCGAAAGCACAGGCCAGGTTTCCAAACAGTTGCAGTCCGACCTGATGAAAGTACA 4170 ||| ||| ||| ||| | || ||| || | || |||||||| || ||| || Sbjct 4169 AGAGATCACCGCCACCGGCGAAGTGAGCAAGAAGATTCAAACCGACCTGCAGACAGTGCA 4228 Query 4171 GGAAGAGCTGACCAAATCCGGCACTCGCCTCTTCGATCTGGAACAGAAACTGGCATCCGG 4230 ||| || |||| | ||||| | ||| | |||||||| || ||| || || ||| Sbjct 4229 GGACGAACTGAAAACGGCCGGCTCCCGCTTGTTCGATCTCGAGTCGAAGCTTGCCGGCGG 4288 Query 4231 CGCT---GAGAATCCTGGTGAGAAGAAATCCTTCTCTGAACGGGCTGCTGAAGAGCTTAT 4287 | || || || |||| | |||||||| ||| |||| ||||| || ||||| || | Sbjct 4289 CACTCTCGATAACCCTGAAGCCAAGAAATCGTTCGCTGAGCGGGCGGCCGAAGATCTGAA 4348 Query 4288 TAAGTCATGGGACGG---TAAACAGGGCACCTTTGGCGCTAAAACGTTTAACAAGTCACT 4344 ||| ||| |||| || |||| | | || | | || | |||| | || Sbjct 4349 GAAGGGCTGGAACGGCTCTACGTCCGGCAAAGTGGACGTGATTAGCTTCAGCAAGGCTCT 4408 Query 4345 AGGCAGTGACGCTGATTCGGCTGGCTCACTGATCCAGCCTATGCAGATCCCAGGCATCAT 4404 ||| | ||| | ||| ||||| | || ||||||| ||||| ||| ||||| | Sbjct 4409 CGGCGCAGGCGCCGCTTCTGCTGGTGCGTTGGTCCAGCCCCAGCAGAACCCCGGCATTCT 4468 Query 4405 CATGCCAGGCCTGCGCCGTCTTACCATTCGTGATCTGCTGGCTCAGGGCCGC---ACTTC 4461 |||||| ||||||||||| || ||||| ||||| |||||||| || || ||| ||||| Sbjct 4469 CATGCCCGGCCTGCGCCGGCTGACCATCCGTGACCTGCTGGCGCAAGGTCGCACGACTTC 4528 Query 4462 CAGTAACGCTCTGGAATATGTGCGTGAAGAGGTGTTTACCAATAACGCCGACGTGGTGGC 4521 | |||| | || || ||||| || | || || | ||| | ||||| ||| || Sbjct 4529 C---GACGCCATCGAGTACGTGCGCGAGAACGTATTCATCAACAGCGCCGCTCCGGTCGC 4585 Query 4522 AGAGAAAGCACTGAAGCCAGAATCGGATATCACCTTCAGCAAACAAACCGCGAACGTGAA 4581 ||| | |||||||| || || | | ||||||| ||| |||| || ||||| || Sbjct 4586 CGAGGGCACGCTGAAGCCCGAGTCCAACCTGACCTTCACCAAGGAAACGGCCAACGTCAA 4645 Query 4582 GACCATCGCGCACTGGGTGCAGGCATCACGTCAGGTGATGGATGATGCGCCAATGCTTCA 4641 ||| | || |||||| | ||||| || || ||| | ||| ||| || || ||||| | Sbjct 4646 GACGCTGGCTCACTGGATTCAGGCTTCTCGCCAGATCATGTCTGACGCTCCGATGCTGGA 4705 Query 4642 GTCCTACATTAACAACCGCCTCATGTACGGCCTGGCACTGAAGGAAGAGGGCCAGCTGCT 4701 ||||| | ||| ||||| ||| || |||| || ||||| || ||||| || Sbjct 4706 ATCCTATGTGAACGGTCGCCTGTTGTTTGGTCTGGACTTGGTCGAAGAAGGGCAGCTTCT 4765 Query 4702 GAACGGCGACGGTACCGGGGATAACCTGGAAGGGCTGAACAAAGTGGCAACCGCCTATGA 4761 |||||||| || ||||| || |||||| || ||||||||||| || |||||||| || Sbjct 4766 CAACGGCGATGGCACCGGTGACAACCTGATCGGCCTGAACAAAGTCGCGACCGCCTACGA 4825 Query 4762 CACCTCGCTGAATGCCACCGGCGACACCCGCGCTGACATTATCGCTCACGCTATTTATCA 4821 ||| |||| ||||||||||||||||| ||||||||| || || ||||| || | || Sbjct 4826 CACTACGCTCAATGCCACCGGCGACACTCGCGCTGACCAGATTGCACACGCGATCTTCCA 4885 Query 4822 GGTGACCGAGTCTGAGTTCAGCGCTTCCGGTATCGTCCTGAACCCGCGCGACTGGCACAA 4881 | | ||| || |||||| ||||| || | || ||||||| |||||||||||| Sbjct 4886 GACCAGCGAATCCGAGTTCGAGGCTTCGGGCCTGATCTTGAACCCCCGCGACTGGCACGC 4945 Query 4882 CATCGCGTTGCTGAAAGACAATGAAGGCCGCTATATCTTCGGTGGTCCTCAGGCATTCAC 4941 ||||||| ||||||||||| ||| || || || ||||| || || ||| ||| ||| | Sbjct 4946 CATCGCGCTGCTGAAAGACGGTGATGGTCGTTACATCTTTGGCGGCCCTGCGGCGTTCGC 5005 Query 4942 CAGTAACATCATGTGGGGCTTGCCAGTGGTTCCGACTAAGGCGCAGGCCGCCGGCACCTT 5001 | || |||||||||| | || || ||| | || || || ||||| || || || Sbjct 5006 CGCCAAGGTCATGTGGGGGCTTCCTGTTGTTGCCACCAAAGCCCAGGCACAGGGAACTTT 5065 Query 5002 TACCGTAGGCGGTTTCGATATGGCCTCACAGGTCTGGGATCGCATGGATGCCACCGTGGA 5061 || || ||||| ||||| ||||| || ||| ||||||| |||||||| || || | || Sbjct 5066 CACTGTTGGCGGCTTCGACATGGCTTCGCAGATCTGGGACCGCATGGACGCGACTATCGA 5125 Query 5062 AGTTAGCCGTGAAGACCGCGATAACTTCGTGAAAAACATGCTGACCATCCTGTGCGAAGA 5121 | ||| | || ||||| |||||||||||||||||||||||||||||||||||||| Sbjct 5126 GATCAGCAACCAGGATCGCGACAACTTCGTGAAAAACATGCTGACCATCCTGTGCGAAGA 5185 Query 5122 GCGTCTGGCGCTGGCGCATTATCGCCCGACAGCAATCATCAAGGGCACCTTC 5173 ||| |||||| | | || ||||| || || ||||||||||| ||| | ||| Sbjct 5186 GCGCCTGGCGGTTACCCACTATCGTCCTACCGCAATCATCAAAGGCGCTTTC 5237 >seq3087926 Length=6391 Score = 127 bits (140), Expect = 5e-25 Identities = 323/484 (67%), Gaps = 12/484 (2%) Strand=Plus/Minus Query 12687 GATCCGTCGCTGGATGAATGCAATGGCACGCTGACGGCCTGCAAACTCCGATTCGGCGAA 12746 |||||| | |||| | ||||| ||| ||| || ||||||| | ||||||||||| Sbjct 5396 GATCCGGCCAAGGATCAGTGCAAGGGCTGCCTGTCGTCCTGCAAGTTGCGATTCGGCGAG 5337 Query 12747 AATAACGAACTCTCGTTTGGTGGCTTCCCTGGTACGTCGCTGAT---CAGGAGTTGA-TA 12802 || |||||||| || ||||| || ||||| | ||| || || | |||| ||| | Sbjct 5336 AACAACGAACTGTCCTTTGGCGGATTCCCCGCCGTGTCTCTCATTGCCCGGAGCTGACCA 5277 Query 12803 TGCGTCAGAAAACCATCGATGCGATTATGGCGCATGCTGCAGCTGAATATCCTCGTGAGT 12862 |||| || | | ||| | || || ||||||||| || | || ||||| || |||| Sbjct 5276 TGCGCAAGCACATCATTGCGGCCATCCAGGCGCATGCGGCGACGGAGTATCCGCGAGAGT 5217 Query 12863 GTTGTGGCGTGGTGGCGCAAAAGAGCCGGGTAGAGAAATATTTTCCATGTAGTAACCTCG 12922 | || ||| || || | | |||| | |||| || || || || | ||| | | Sbjct 5216 GCTGCGGCCTGCTGTTGGCCGTGGGCCGCGCGCAGAAGTACTTCCCGTGCCGGAACATAG 5157 Query 12923 CTACCGAGCCGACAGAACATTTTCACCTGTCTCCAGAAGACTATGCAGCTGCTGAGGACT 12982 | | ||||||| ||| | || | || || || ||||| || || || || |||| Sbjct 5156 CCAAGGAGCCGAACGAAGAGTTCCGGCTTGACCCCGAGGACTACGCCGCGGCGGAAGACT 5097 Query 12983 GGGGTACGGTGATCGCCATCGTTCACAGTCACCCTGACGCCACAACGCAGCCGAGCGAAC 13042 ||| |||||||| |||||| ||| ||||| |||||||| | |||| | | || Sbjct 5096 TGGGCGAGGTGATCGGCATCGTCCACTCGCACCCGGACGCCACCA-GCAG--GCCCTCAC 5040 Query 13043 TGGATAA---AGCGCAATGCGACGCAACGCTTTTACCCTGGCATATTGTGAGCTGGCCGG 13099 | || | || || || || ||| ||| || ||||| || || ||||| | Sbjct 5039 CGCATGACTTGGCCATGTGTGAGGCCACGGCTTTGCCATGGCACATCCTGTCTTGGCCCG 4980 Query 13100 AGGGGGATTTACGCACCATCCAGCC-GCGCGGAGAACTGCCACTGCTGGAGCGTCCGTTT 13158 |||| || | ||||| || ||| ||| | || || ||| ||||| |||| ||||| Sbjct 4979 AGGGTGACTGGCGCACGATTACGCCGGCGGGTAGCAC-GCCGCTGCTCAAGCGCCCGTTC 4921 Query 13159 GTGC 13162 |||| Sbjct 4920 GTGC 4917 >seq3087822 Length=6084 Score = 120 bits (132), Expect = 8e-23 Identities = 316/475 (67%), Gaps = 12/475 (3%) Strand=Plus/Minus Query 12694 CGCTGGATGAATGCAATGGCACGCTGACGGCCTGCAAACTCCGATTCGGCGAAAATAACG 12753 |||| || | ||||| ||| ||| || ||||||| | || ||||||||||| |||| Sbjct 2105 CGCTTGACCAGTGCAAGGGCTGTCTGTCGTCCTGCAAGTTGCGCTTCGGCGAAAACAACG 2046 Query 12754 AACTCTCGTTTGGTGGCTTCCCTGGTACGTCGCTGA---TCAGGAGTTGA-TATGCGTCA 12809 |||| || || ||||| ||||| | || |||| || |||| ||| |||||| | Sbjct 2045 AACTGTCCTTCGGTGGATTCCCCGCCGTTTCCCTGATTGTCCGGAGCTGACTATGCGCAA 1986 Query 12810 GAAAACCATCGATGCGATTATGGCGCATGCTGCAGCTGAATATCCTCGTGAGTGTTGTGG 12869 | | | ||| | || ||| |||||| || || || |||||||| || || || || || Sbjct 1985 GCACATCATTGCCGCTATTCAGGCGCACGCGGCGGCGGAATATCCGCGCGAATGCTGCGG 1926 Query 12870 CGTGGTGGCGCAAAAGAGCCGGGTAGAGAAATATTTTCCATGTAGTAACCTCGCTACCGA 12929 || || | | |||| | |||| || || || || | ||| |||| || || Sbjct 1925 GCTGCTGCTGGCCGTGGGCCGCGCTCAGAAGTACTTCCCGTGCCGGAACATCGCCACGGA 1866 Query 12930 GCCGACAGAACATTTTCACCTGTCTCCAGAAGACTATGCAGCTGCTGAGGACTGGGGTAC 12989 ||||| ||| | || | || ||| || | ||| || || || ||||||| ||| Sbjct 1865 GCCGAGCGAAGAGTTCAAGCTCGATCCCGAGGGCTACGCTGCGGCAGAGGACTTGGGCGA 1806 Query 12990 GGTGATCGCCATCGTTCACAGTCACCCTGACGCCACAACGCAGCC---GAGCGAACTGGA 13046 |||||||| || || ||| ||||| ||||| || | || ||| | || || || Sbjct 1805 GGTGATCGGTATAGTCCACTCACACCCGGACGCAACCA-GCCGCCCATCACCGCAC--GA 1749 Query 13047 TAAAGCGCAATGCGACGCAACGCTTTTACCCTGGCATATTGTGAGCTGGCCGGAGGGGGA 13106 || || || || ||| | |||||||||||| | ||||| ||||| || Sbjct 1748 CCTTGCCATGTGTGAGGCCACGGCCGTGCCCTGGCATATTCTCTCGTGGCCCGAGGGCGA 1689 Query 13107 TTTACGCACCATCCAGCC-GCGCGGAGAACTGCCACTGCTGGAGCGTCCGTTTGT 13160 | ||||| ||| ||| || | | || ||| ||||| |||| ||||| || Sbjct 1688 CATGCGCACGATCACGCCAACGGGCACCAC-GCCGCTGCTCAAGCGGCCGTTCGT 1635 >seq3088057 Length=7030 Score = 96.9 bits (106), Expect = 9e-16 Identities = 200/297 (67%), Gaps = 12/297 (4%) Strand=Plus/Plus Query 15336 AACCCTGCGTGGATTTTTTACGACCTGGTTGTTT---CTGACCGGTTCGGCCTTGGGCAC 15392 |||||||||||| | ||||| |||||||| | || || | |||||| || | Sbjct 5648 AACCCTGCGTGGGTGTTTTATGACCTGGTGCTGCACCCTTAC---TACGGCCTCGGCGAT 5704 Query 15393 CGTTTGACCGCTGCGAATATTGATAAATGGACGCTTTATCAGGTTGCTCAGTATTGTGAT 15452 || | || ||| ||||| ||| ||||||||| | || || || || ||| Sbjct 5705 CGCATCGATGCCACGATGGTTGATCGCTGGTCGCTTTATCGCATCGCGCAATACTGCGAT 5764 Query 15453 CAGATGGTGCCAGACGGCAAAGGGGGCAACGGTACAGAACCACGTTATACCTGCAACGTG 15512 ||||||||||| || || ||||| ||| | || || || | |||||||||| || Sbjct 5765 CAGATGGTGCCGGATGGAAAAGG------CGGCATGGAGCCGCGCTTTACCTGCAACCTG 5818 Query 15513 TACATTCAGGACCGGAACGACGCCTACACAGTCCTGCGTGATTTTGCCGCTATCTTCCGT 15572 ||| | || | | | ||| |||||| | || |||| ||| | || | ||||| | Sbjct 5819 TACCTGCAAAAGCAGGCCGAGGCCTACGCGGTGCTGCAGGATCTGGCATCGATCTTTCAC 5878 Query 15573 GGCATGACCTACTGGGGCGGGGATCAGATTGTGGCCCTGGCTGACATGCCGCGCGAT 15629 || || ||||||||| ||| ||||| |||| | || || |||||| ||||| Sbjct 5879 GGTCTGGCCTACTGGGACGGCAGCCAGATCGTGGTCAACGCCGATATGCCGGGCGAT 5935 >seq2884985 Length=308 Score = 93.3 bits (102), Expect = 1e-14 Identities = 168/244 (69%), Gaps = 14/244 (6%) Strand=Plus/Minus Query 17666 CGCGGGGATGGGTATCGGCGTGGAGAATACGCCATCCGGCATGCAGTCGCAGGTTATCTT 17725 |||||| || || | || ||||||| | | |||| ||||||||||| | ||| | Sbjct 291 CGCGGGTATCGGGCTTGGGTTGGAGAACGGGTCGGGCGGCCTGCAGTCGCAGTTCATCAT 232 Query 17726 CCTGGCTGATCGCTTCGCCGTCACCACGGCA-GCCGGTAACAGCGTGGCTTTGCCGTTTG 17784 | || || || |||||| || |||| ||||| || |||| || |||| Sbjct 231 CGACGCCGACCGGTTCGCCATCG----GGCAAGCCGG---CATCGTG------CCCTTTG 185 Query 17785 TGATCCAGAATGGACAGACATTCATCCGGGCCAGTTTCATCCAGGACGGCACTATCAGCA 17844 | | ||| ||| ||||| ||||| | |||||||||||||||||| |||| || Sbjct 184 CGGTACAGGGTGGGCAGACTTTCATTAAATCGGCTTTCATCCAGGACGGCACGATCACCA 125 Query 17845 ACGCAAAGATTGGTAATTTTATCCAGTCGAACAATTATGTTGCTGGTTCTGCTGGCTGGA 17904 |||| ||||| || || | |||||||| || || || | | ||| |||||||||| Sbjct 124 ACGCCAAGATCGGCAACTACATCCAGTCCAATAACTACGACCCAGGTAAGGCTGGCTGGA 65 Query 17905 AGCT 17908 |||| Sbjct 64 AGCT 61 >seq3088451 Length=13260 Score = 84.2 bits (92), Expect = 6e-12 Identities = 67/81 (83%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 15127 GCTTCACCGAGGTGATTGACGCCAAACTGCGCTACCCGAACACCGCGCTGCTCTACGTCG 15186 ||| |||| ||||||| ||||| || ||||||||||| |||||||||||||| | ||||| Sbjct 11818 GCTACACCCAGGTGATCGACGCAAAGCTGCGCTACCCAAACACCGCGCTGCTGTTCGTCG 11877 Query 15187 AATTCGACTCAAGCCAGTTCA 15207 | |||||| | ||||||| Sbjct 11878 AGTTCGACGCCGAGCAGTTCA 11898 >seq347631 Length=610 Score = 80.6 bits (88), Expect = 7e-11 Identities = 75/93 (81%), Gaps = 2/93 (2%) Strand=Plus/Minus Query 15099 AAGATCGGCGACACGATGATGCT-GCAGAGCTTCACCGAGGTGATTGACGCCAAACTGCG 15157 || ||| |||||||||| | | || | ||||||| |||||||| |||||||| | || Sbjct 530 AAAATCTCCGACACGATGCAGATTGCCG-GCTTCACAGAGGTGATCGACGCCAAGATCCG 472 Query 15158 CTACCCGAACACCGCGCTGCTCTACGTCGAATT 15190 ||||||||||||||| |||||||| |||| || Sbjct 471 TTACCCGAACACCGCGTTGCTCTACATCGAGTT 439 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127898591787180