Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09]
3,088,511 sequences; 2,785,377,831 total letters
Query= NC_019719.1
Length=41528
Score E
Sequences producing significant alignments: (Bits) Value
seq3088379 1086 0.0
seq3087926 127 5e-25
seq3087822 120 8e-23
seq3088057 96.9 9e-16
seq2884985 93.3 1e-14
seq3088451 84.2 6e-12
seq347631 80.6 7e-11
>seq3088379
Length=10556
Score = 1086 bits (1204), Expect = 0.0
Identities = 2155/3172 (68%), Gaps = 56/3172 (2%)
Strand=Plus/Plus
Query 2025 TCGACGACTTCATTTTCCGACCGCTGAGCATGTGATGGAAGAACCTAAATACACGATTGA 2084
||||||||||| | | | ||||| ||||||||| |||| ||| | | |||| || ||
Sbjct 2099 TCGACGACTTCCTCTCCAGACCGATGAGCATGTAATGGCAGATACCGACTACAGCATCGA 2158
Query 2085 CCTGCGAACCAATAACGGCTGGTGGGCAAGGCTGCAGTCCTGGTTTGTCGGCGGGCGTTT 2144
|||||| || | | ||||| | || | || ||||||||||| || |
Sbjct 2159 CCTGCGCACGCGCAGTCCATTCTGGGCGCGTATGGCGAGCTTCTTTGTCGGCGGCCGCCT 2218
Query 2145 AGTCACCCCAAATCAGGGCTCACAGACGGGGCCTGTTTCGGCCCACGGACACCTGGGCGA 2204
||||| || | | || |||||||| || || || || ||||| || |||| ||
Sbjct 2219 GGTCACACCTGAAAAAGGTTCACAGACAGGCCCAGTATCAGCCCAGGGTGTAGTGGGTGA 2278
Query 2205 TTCATCCATTAACGATGAACGGATACTGCAAATTTCGACTGTGTGGCGCT-GCGTGAGCC 2263
||| | | |||||||| || || || || |||| |||| |||| ||||| | |
Sbjct 2279 TTCGGTCGTAAACGATGAGCGCTCGCTCCAGATCGCGACCGTGTT-CGCTTGCGTGCGGC 2337
Query 2264 TGATTTCAACGCTCACGGCATGCTTACCGCTTGATGTCTTCGAAAC-AGACCAGAATGAC 2322
| || || | | || || ||| | || || || || ||| |||| | | ||| |||
Sbjct 2338 TTATCTCCAGCGTGACAGCTTGCATGCCACTGGACGTTTTCCAAACCAAAGGCGAA-GAC 2396
Query 2323 AACCGTAAAAAAGTGGATTTGAGCAATCCACTGGCGCGACTGCTGCGCTACTCACCGAAT 2382
| ||||| || | || || || ||||||||||| || ||| || ||
Sbjct 2397 AGG-GTAAAG--GTCGGGCTGGATAACCCGCTGGCGCGACTCCTTAAGTACCGCCCCAAC 2453
Query 2383 CAGTACATGACCGCCCAAGAATTCAGGGAGGCCATGACGATGCAGCTCTGTTTCTACGGT 2442
| | |||||| ||| || || | | ||||||||| |||||||| || | |||||
Sbjct 2454 GACTTCATGACTGCCTTTGATTTTCGTGTGGCCATGACTATGCAGCTTTGCTATTACGGC 2513
Query 2443 AACGCATATGCACTTGTGGACCGCAACAGCGCAGGTGACGTGATCAGCCTTCTCCCGCTT 2502
|| || || || || | || ||||| | || || ||||| ||||| || | |||||
Sbjct 2514 AATGCCTACGCGCTGATTGAGCGCAATGGGGCTGGGGACGTAATCAGTCTAGTGCCGCTC 2573
Query 2503 CAGTCTGCCAATATGGATGTGAAGCTCGTCGGaaaaaaaG-TGGTTTATCGCTATCAACG 2561
||||| || |||||||| ||| | || || | | ||||| || |||| ||
Sbjct 2574 ATGTCTGTGAACATGGATGTTC-GCTTGGAGGGTAAGCGGATCGTTTACCGATATCGCCG 2632
Query 2562 CGACAGCGAATACGCCGACTTTTCGCAGAAAGAGATTTTTCATCTTAAAGGCTTCGGATT 2621
||||| | | ||||| || || ||| | || |||||||| || || || || || ||
Sbjct 2633 CGACACCAAGTACGCAGATTTCAAGCAAAGCGATATTTTTCACCTGAAGGGTTTTGGTTT 2692
Query 2622 CACCGGGCTTGTAGGCCTGTCACCCATTGCTTTTGCCTGTAAATCGGCAGGTGTGGCAGT 2681
| ||| || || ||||| || || |||||||| || || | || ||||| || ||
Sbjct 2693 TAACGGCCTGGTTGGCCTTTCGCCGATTGCTTTCGCAGCGAAGACCGCCGGTGTAGCCGT 2752
Query 2682 TGCGATGGAGGACCAGCAGCGAGATTTCTTTGCCAACGGCGCCAAGTCTCCGCAAATCCT 2741
||||||||| || |||||||| || || | ||||||||| |||||||| |||||| | ||
Sbjct 2753 TGCGATGGAAGATCAGCAGCGCGACTTTTATGCCAACGGTGCCAAGTCCCCGCAACTTCT 2812
Query 2742 CTCAACTGGCGA---AAAAGTGCTAACTGAACAGCAGCGCTCCCAGGTCGAAGAGAACTT 2798
|| || || ||| || || | | | ||||| | || ||||| ||||| ||
Sbjct 2813 TATGACAGGGGATGGAAAGGTTCTCAACAAGGATCAGCGGGCGCAAGTCGAGGAGAATTT 2872
Query 2799 CAAAGAGATCGCCGGCGGCCCGGTaaaaaaaCGCCTCTGGATTCTGGAAGCGGGTTTTTC 2858
||| ||||| ||||||| || || || || || |||||||| |||| | |||||| |
Sbjct 2873 CAAGGAGATATCCGGCGGGCCAGTCAAGAAGCGTCTCTGGATCTTGGAGGGAGGTTTTAC 2932
Query 2859 TACATCGGCAATTGGCGTAACTCCGCAGGATGCCGAAATGATGGCGTCCCGAAAATTTCA 2918
|| ||| || ||||| | ||||| || ||||| | ||||| || |||| || ||
Sbjct 2933 GACCCAGGCCATAGGCGTGAGCCCGCAAGACGCCGAGACAATGGCTGCCAGAAAGTTCCA 2992
Query 2919 GGTAAGTGAACTGGCGCGATTCTTTGGCGTACCGCCTCACCTTGTCGGCGACGTCGAGAA 2978
||| ||||| |||||||| ||||| ||||| ||||| || || || |||||||| || ||
Sbjct 2993 GGTGAGTGAGCTGGCGCGGTTCTTCGGCGTGCCGCCGCATCTGGTGGGCGACGTTGAAAA 3052
Query 2979 ATCAACGAGCTGGGGATCGGGCATCGAGCAGCAGAATCTCGGCTTCCTGCAGTACACCCT 3038
||||| |||||||| || || |||||||| ||||| || ||||| || |||||| | ||
Sbjct 3053 GTCAACCAGCTGGGGGTCAGGTATCGAGCAACAGAACCTGGGCTTTCTCCAGTACGCGCT 3112
Query 3039 GCAGCCCTATATCTCCAGGTGGGAAAACAGCATTCAGCGGTGGCTTATTCCTGCTAAGGA 3098
| || || | | ||||| | |||||| ||| |||||| | | | ||
Sbjct 3113 CGACCCTTACCTTGAAATTTGGGAGGGCTGCATTCTGCGATGGCTTGTAAAGCCGAGCGA 3172
Query 3099 TGTTGGCCGCATTCATGCTGAGCACAACCTCGACGGCCTGCTGAGGGGCGATTCGGCATC 3158
| || | |||||||||||||||| ||||| ||||||| || || || | |
Sbjct 3173 CCTCGGGGTGTTCCATGCTGAGCACAACCGAGACGGGTTGCTGAGTGGTGACTCAACCGC 3232
Query 3159 CCGCGCTGCCTTTATGAAGGCAATGGGAGAGGCAGGGCTACGCACCATCAACGAGATGCG 3218
|||||| | | || | || || | ||||| | || ||||||| ||
Sbjct 3233 CCGCGCGAATTACCTAAAAACGTTGATTGATACCGGGCTGCTGACTCCCAACGAGGGCCG 3292
Query 3219 ACGAACGGACAACCTCCCGCCATTGCCGGGTGGCGATGTGGCAATGCGCCAGTCGCAATA 3278
||| ||| ||| |||| || ||||| || || | ||||| |||||| |
Sbjct 3293 GCGAGTCAGCAATAGGCCGAAGCTGCCCGGCGGCGACGTCGCCACACGCCAATCGCAAAA 3352
Query 3279 CGTGCCGATC-ACCGATTTAGGAACCAACAAAGAGCCCCGTAA-TAACGGGGCTTAATTT 3336
||||||| | | | | || | | ||||| ||||| | ||||| ||| |||
Sbjct 3353 CGTGCCGCTTGATCAACTTGGTCA-----AAAGAACCCCGCCCCTGGCGGGGTTTAGTTT 3407
Query 3337 TTATGGGGGC-CGTAATGCCTGAAATCGTAAAAACGCTGTCCTTCGACGAGACAGAAATC 3395
|| ||| | | |||| | | || ||| || || | ||| |||||| |||||
Sbjct 3408 TTCTGGAGCTACCCAATGGCAAATATTCAAAAGACCTTGGCGTTCACCGAGACTCAAATC 3467
Query 3396 AAATTCACCGGTGACGGTAAACAGGGGATTTTTGAAGGCTACGCCTCTGTTTTTAATAAC 3455
|| ||| || || || || || | || || || |||||| |||||| | |
Sbjct 3468 AAGTTCTCCTCGGATGGCAAGGTTGGTGTGTTCGAGGGGTACGCCAGTGTTTTCGACGTC 3527
Query 3456 ACCGATTCCGATGGCGACATCATTCTGCCCGGGGCGTTTAAAAACGCGCTGGCGAACCAG 3515
| ||| || || ||||||||||| |||||||| || || || || || || | ||
Sbjct 3528 ATCGACTCAGACGGCGACATCATCCTGCCCGGCGCCTTCAAGAAGGCTTTGTCTTCGCAA 3587
Query 3516 ACCCGAAAAGTGGCGATGTTTTTTAACCACAGGACGTGGGAACTGCCGGTTGGCAAATGG 3575
| ||| |||| | |||||||||||||| ||| | | ||||| ||||| || |||
Sbjct 3588 AGCCGCCAAGTCGGCATGTTTTTTAACCATCAGACCTACGGCCTGCCTGTTGGAAAGTGG 3647
Query 3576 GACAGCCTGGCTGAGGACGAAAAAGGCCTGTATGTGCGCGGTCAACTTACCCCAGGACAC 3635
| ||||| |||||| ||||| || | || | || | || || || ||
Sbjct 3648 CAGTCGCTGGCGGAGGACAGCAAAGGACTCTTCGTTGGAGGCGAGCTGACGCCCGGTTTG 3707
Query 3636 AGCGGCGCCGCTGACCTGAAAGCGGCAATGCAGCACGGTACGGTTGAAGGTATGTCGGTT 3695
| | || ||||| || || ||| | || || || || ||| ||||||||
Sbjct 3708 TCGGTCTCCAACGACCTCCGGGCAGCCATGGAACATAAGACCGTCGAGGGTTTGTCGGTT 3767
Query 3696 GGCTTTTCCGTTTCGAAAGACGATTACACCATCATTCCAACAGGCCGCATTTTTAAGAAT 3755
||||| |||| || ||||||||| || |||| || |||||| || | |||
Sbjct 3768 GGCTTCACCGTCCTCAAGGACGATTACGCCGTCATCGATACCGGCCGCGCATTCAGCAAT 3827
Query 3756 ATCCAGGCTCTGCGCGAAATCAGCGTCTGCACTTTCCCCGCCAACGAACAGGCTGGCATC 3815
||||||| ||||| || |||||| | ||||| || || ||||| || ||||| |||
Sbjct 3828 GTCCAGGCCCTGCGAGAGATCAGCATTTGCACCTTTCCTGCCAATGAGCAGGCGACCATT 3887
Query 3816 GCAGCCATGAAAAGTGTCGATGGTATTGAA----ACGATTCGTGATGTGGAGAACTGGCT 3871
| ||||||||||| |||| || || || ||||| ||||| ||| | |||||
Sbjct 3888 GACGCCATGAAAAGC----ATGGAATCGATCAGCACCATTCGCGATGTAGAGCATTGGCT 3943
Query 3872 GAGGGATTCAGTCGGCCTCACCAAATCACAGGCAGTTGGGCTAATTGCCCGGTTTAAGTC 3931
||||||||| | ||| || | || || || || | || || || |||||| | |||||
Sbjct 3944 GAGGGATTCGGCCGGTCTTTCGAAGTCGCAAGCCCTGGGCCTGATAGCCCGGATCAAGTC 4003
Query 3932 AGCGATTCGGAGCGAGTCCGAGGGCGACGGAAACGAAGCACAAATAAACGCTCTGCTTCA 3991
|| ||||||| || ||||| || | || |||| | ||| | || |
Sbjct 4004 CGCAGTTCGGAGTGATTCCGAAGGTGGCG------------AAATCACCGCGATCCTGGA 4051
Query 3992 GAGCATCAAATCTTTCCCTTCTAACTTAGGTAAATAATT-ATGTCTGAACTCGCTCTCAT 4050
||||||| || ||||| ||| |||| || ||| ||||| ||| | || | ||
Sbjct 4052 TCGCATCAAGTCATTCCCATCTG---TAGGAAATTAAACCATGTCCGAATTGGCCCAAAT 4108
Query 4051 TCAAAAAGCTATCGAAGAATCCCAGCAGAAAATGACCCAGCTTTTCGATGCGCAGAAAGC 4110
|||||| || |||||| | || ||| ||||| |||| ||||| ||||| ||
Sbjct 4109 TCAAAAGGCAATCGAAACCGCGCAAACGAACATGACTGAGCTGTTCGAGGCGCAAAAGAA 4168
Query 4111 AGAAATCGAAAGCACAGGCCAGGTTTCCAAACAGTTGCAGTCCGACCTGATGAAAGTACA 4170
||| ||| ||| ||| | || ||| || | || |||||||| || ||| ||
Sbjct 4169 AGAGATCACCGCCACCGGCGAAGTGAGCAAGAAGATTCAAACCGACCTGCAGACAGTGCA 4228
Query 4171 GGAAGAGCTGACCAAATCCGGCACTCGCCTCTTCGATCTGGAACAGAAACTGGCATCCGG 4230
||| || |||| | ||||| | ||| | |||||||| || ||| || || |||
Sbjct 4229 GGACGAACTGAAAACGGCCGGCTCCCGCTTGTTCGATCTCGAGTCGAAGCTTGCCGGCGG 4288
Query 4231 CGCT---GAGAATCCTGGTGAGAAGAAATCCTTCTCTGAACGGGCTGCTGAAGAGCTTAT 4287
| || || || |||| | |||||||| ||| |||| ||||| || ||||| || |
Sbjct 4289 CACTCTCGATAACCCTGAAGCCAAGAAATCGTTCGCTGAGCGGGCGGCCGAAGATCTGAA 4348
Query 4288 TAAGTCATGGGACGG---TAAACAGGGCACCTTTGGCGCTAAAACGTTTAACAAGTCACT 4344
||| ||| |||| || |||| | | || | | || | |||| | ||
Sbjct 4349 GAAGGGCTGGAACGGCTCTACGTCCGGCAAAGTGGACGTGATTAGCTTCAGCAAGGCTCT 4408
Query 4345 AGGCAGTGACGCTGATTCGGCTGGCTCACTGATCCAGCCTATGCAGATCCCAGGCATCAT 4404
||| | ||| | ||| ||||| | || ||||||| ||||| ||| ||||| |
Sbjct 4409 CGGCGCAGGCGCCGCTTCTGCTGGTGCGTTGGTCCAGCCCCAGCAGAACCCCGGCATTCT 4468
Query 4405 CATGCCAGGCCTGCGCCGTCTTACCATTCGTGATCTGCTGGCTCAGGGCCGC---ACTTC 4461
|||||| ||||||||||| || ||||| ||||| |||||||| || || ||| |||||
Sbjct 4469 CATGCCCGGCCTGCGCCGGCTGACCATCCGTGACCTGCTGGCGCAAGGTCGCACGACTTC 4528
Query 4462 CAGTAACGCTCTGGAATATGTGCGTGAAGAGGTGTTTACCAATAACGCCGACGTGGTGGC 4521
| |||| | || || ||||| || | || || | ||| | ||||| ||| ||
Sbjct 4529 C---GACGCCATCGAGTACGTGCGCGAGAACGTATTCATCAACAGCGCCGCTCCGGTCGC 4585
Query 4522 AGAGAAAGCACTGAAGCCAGAATCGGATATCACCTTCAGCAAACAAACCGCGAACGTGAA 4581
||| | |||||||| || || | | ||||||| ||| |||| || ||||| ||
Sbjct 4586 CGAGGGCACGCTGAAGCCCGAGTCCAACCTGACCTTCACCAAGGAAACGGCCAACGTCAA 4645
Query 4582 GACCATCGCGCACTGGGTGCAGGCATCACGTCAGGTGATGGATGATGCGCCAATGCTTCA 4641
||| | || |||||| | ||||| || || ||| | ||| ||| || || ||||| |
Sbjct 4646 GACGCTGGCTCACTGGATTCAGGCTTCTCGCCAGATCATGTCTGACGCTCCGATGCTGGA 4705
Query 4642 GTCCTACATTAACAACCGCCTCATGTACGGCCTGGCACTGAAGGAAGAGGGCCAGCTGCT 4701
||||| | ||| ||||| ||| || |||| || ||||| || ||||| ||
Sbjct 4706 ATCCTATGTGAACGGTCGCCTGTTGTTTGGTCTGGACTTGGTCGAAGAAGGGCAGCTTCT 4765
Query 4702 GAACGGCGACGGTACCGGGGATAACCTGGAAGGGCTGAACAAAGTGGCAACCGCCTATGA 4761
|||||||| || ||||| || |||||| || ||||||||||| || |||||||| ||
Sbjct 4766 CAACGGCGATGGCACCGGTGACAACCTGATCGGCCTGAACAAAGTCGCGACCGCCTACGA 4825
Query 4762 CACCTCGCTGAATGCCACCGGCGACACCCGCGCTGACATTATCGCTCACGCTATTTATCA 4821
||| |||| ||||||||||||||||| ||||||||| || || ||||| || | ||
Sbjct 4826 CACTACGCTCAATGCCACCGGCGACACTCGCGCTGACCAGATTGCACACGCGATCTTCCA 4885
Query 4822 GGTGACCGAGTCTGAGTTCAGCGCTTCCGGTATCGTCCTGAACCCGCGCGACTGGCACAA 4881
| | ||| || |||||| ||||| || | || ||||||| ||||||||||||
Sbjct 4886 GACCAGCGAATCCGAGTTCGAGGCTTCGGGCCTGATCTTGAACCCCCGCGACTGGCACGC 4945
Query 4882 CATCGCGTTGCTGAAAGACAATGAAGGCCGCTATATCTTCGGTGGTCCTCAGGCATTCAC 4941
||||||| ||||||||||| ||| || || || ||||| || || ||| ||| ||| |
Sbjct 4946 CATCGCGCTGCTGAAAGACGGTGATGGTCGTTACATCTTTGGCGGCCCTGCGGCGTTCGC 5005
Query 4942 CAGTAACATCATGTGGGGCTTGCCAGTGGTTCCGACTAAGGCGCAGGCCGCCGGCACCTT 5001
| || |||||||||| | || || ||| | || || || ||||| || || ||
Sbjct 5006 CGCCAAGGTCATGTGGGGGCTTCCTGTTGTTGCCACCAAAGCCCAGGCACAGGGAACTTT 5065
Query 5002 TACCGTAGGCGGTTTCGATATGGCCTCACAGGTCTGGGATCGCATGGATGCCACCGTGGA 5061
|| || ||||| ||||| ||||| || ||| ||||||| |||||||| || || | ||
Sbjct 5066 CACTGTTGGCGGCTTCGACATGGCTTCGCAGATCTGGGACCGCATGGACGCGACTATCGA 5125
Query 5062 AGTTAGCCGTGAAGACCGCGATAACTTCGTGAAAAACATGCTGACCATCCTGTGCGAAGA 5121
| ||| | || ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 5126 GATCAGCAACCAGGATCGCGACAACTTCGTGAAAAACATGCTGACCATCCTGTGCGAAGA 5185
Query 5122 GCGTCTGGCGCTGGCGCATTATCGCCCGACAGCAATCATCAAGGGCACCTTC 5173
||| |||||| | | || ||||| || || ||||||||||| ||| | |||
Sbjct 5186 GCGCCTGGCGGTTACCCACTATCGTCCTACCGCAATCATCAAAGGCGCTTTC 5237
>seq3087926
Length=6391
Score = 127 bits (140), Expect = 5e-25
Identities = 323/484 (67%), Gaps = 12/484 (2%)
Strand=Plus/Minus
Query 12687 GATCCGTCGCTGGATGAATGCAATGGCACGCTGACGGCCTGCAAACTCCGATTCGGCGAA 12746
|||||| | |||| | ||||| ||| ||| || ||||||| | |||||||||||
Sbjct 5396 GATCCGGCCAAGGATCAGTGCAAGGGCTGCCTGTCGTCCTGCAAGTTGCGATTCGGCGAG 5337
Query 12747 AATAACGAACTCTCGTTTGGTGGCTTCCCTGGTACGTCGCTGAT---CAGGAGTTGA-TA 12802
|| |||||||| || ||||| || ||||| | ||| || || | |||| ||| |
Sbjct 5336 AACAACGAACTGTCCTTTGGCGGATTCCCCGCCGTGTCTCTCATTGCCCGGAGCTGACCA 5277
Query 12803 TGCGTCAGAAAACCATCGATGCGATTATGGCGCATGCTGCAGCTGAATATCCTCGTGAGT 12862
|||| || | | ||| | || || ||||||||| || | || ||||| || ||||
Sbjct 5276 TGCGCAAGCACATCATTGCGGCCATCCAGGCGCATGCGGCGACGGAGTATCCGCGAGAGT 5217
Query 12863 GTTGTGGCGTGGTGGCGCAAAAGAGCCGGGTAGAGAAATATTTTCCATGTAGTAACCTCG 12922
| || ||| || || | | |||| | |||| || || || || | ||| | |
Sbjct 5216 GCTGCGGCCTGCTGTTGGCCGTGGGCCGCGCGCAGAAGTACTTCCCGTGCCGGAACATAG 5157
Query 12923 CTACCGAGCCGACAGAACATTTTCACCTGTCTCCAGAAGACTATGCAGCTGCTGAGGACT 12982
| | ||||||| ||| | || | || || || ||||| || || || || ||||
Sbjct 5156 CCAAGGAGCCGAACGAAGAGTTCCGGCTTGACCCCGAGGACTACGCCGCGGCGGAAGACT 5097
Query 12983 GGGGTACGGTGATCGCCATCGTTCACAGTCACCCTGACGCCACAACGCAGCCGAGCGAAC 13042
||| |||||||| |||||| ||| ||||| |||||||| | |||| | | ||
Sbjct 5096 TGGGCGAGGTGATCGGCATCGTCCACTCGCACCCGGACGCCACCA-GCAG--GCCCTCAC 5040
Query 13043 TGGATAA---AGCGCAATGCGACGCAACGCTTTTACCCTGGCATATTGTGAGCTGGCCGG 13099
| || | || || || || ||| ||| || ||||| || || ||||| |
Sbjct 5039 CGCATGACTTGGCCATGTGTGAGGCCACGGCTTTGCCATGGCACATCCTGTCTTGGCCCG 4980
Query 13100 AGGGGGATTTACGCACCATCCAGCC-GCGCGGAGAACTGCCACTGCTGGAGCGTCCGTTT 13158
|||| || | ||||| || ||| ||| | || || ||| ||||| |||| |||||
Sbjct 4979 AGGGTGACTGGCGCACGATTACGCCGGCGGGTAGCAC-GCCGCTGCTCAAGCGCCCGTTC 4921
Query 13159 GTGC 13162
||||
Sbjct 4920 GTGC 4917
>seq3087822
Length=6084
Score = 120 bits (132), Expect = 8e-23
Identities = 316/475 (67%), Gaps = 12/475 (3%)
Strand=Plus/Minus
Query 12694 CGCTGGATGAATGCAATGGCACGCTGACGGCCTGCAAACTCCGATTCGGCGAAAATAACG 12753
|||| || | ||||| ||| ||| || ||||||| | || ||||||||||| ||||
Sbjct 2105 CGCTTGACCAGTGCAAGGGCTGTCTGTCGTCCTGCAAGTTGCGCTTCGGCGAAAACAACG 2046
Query 12754 AACTCTCGTTTGGTGGCTTCCCTGGTACGTCGCTGA---TCAGGAGTTGA-TATGCGTCA 12809
|||| || || ||||| ||||| | || |||| || |||| ||| |||||| |
Sbjct 2045 AACTGTCCTTCGGTGGATTCCCCGCCGTTTCCCTGATTGTCCGGAGCTGACTATGCGCAA 1986
Query 12810 GAAAACCATCGATGCGATTATGGCGCATGCTGCAGCTGAATATCCTCGTGAGTGTTGTGG 12869
| | | ||| | || ||| |||||| || || || |||||||| || || || || ||
Sbjct 1985 GCACATCATTGCCGCTATTCAGGCGCACGCGGCGGCGGAATATCCGCGCGAATGCTGCGG 1926
Query 12870 CGTGGTGGCGCAAAAGAGCCGGGTAGAGAAATATTTTCCATGTAGTAACCTCGCTACCGA 12929
|| || | | |||| | |||| || || || || | ||| |||| || ||
Sbjct 1925 GCTGCTGCTGGCCGTGGGCCGCGCTCAGAAGTACTTCCCGTGCCGGAACATCGCCACGGA 1866
Query 12930 GCCGACAGAACATTTTCACCTGTCTCCAGAAGACTATGCAGCTGCTGAGGACTGGGGTAC 12989
||||| ||| | || | || ||| || | ||| || || || ||||||| |||
Sbjct 1865 GCCGAGCGAAGAGTTCAAGCTCGATCCCGAGGGCTACGCTGCGGCAGAGGACTTGGGCGA 1806
Query 12990 GGTGATCGCCATCGTTCACAGTCACCCTGACGCCACAACGCAGCC---GAGCGAACTGGA 13046
|||||||| || || ||| ||||| ||||| || | || ||| | || || ||
Sbjct 1805 GGTGATCGGTATAGTCCACTCACACCCGGACGCAACCA-GCCGCCCATCACCGCAC--GA 1749
Query 13047 TAAAGCGCAATGCGACGCAACGCTTTTACCCTGGCATATTGTGAGCTGGCCGGAGGGGGA 13106
|| || || || ||| | |||||||||||| | ||||| ||||| ||
Sbjct 1748 CCTTGCCATGTGTGAGGCCACGGCCGTGCCCTGGCATATTCTCTCGTGGCCCGAGGGCGA 1689
Query 13107 TTTACGCACCATCCAGCC-GCGCGGAGAACTGCCACTGCTGGAGCGTCCGTTTGT 13160
| ||||| ||| ||| || | | || ||| ||||| |||| ||||| ||
Sbjct 1688 CATGCGCACGATCACGCCAACGGGCACCAC-GCCGCTGCTCAAGCGGCCGTTCGT 1635
>seq3088057
Length=7030
Score = 96.9 bits (106), Expect = 9e-16
Identities = 200/297 (67%), Gaps = 12/297 (4%)
Strand=Plus/Plus
Query 15336 AACCCTGCGTGGATTTTTTACGACCTGGTTGTTT---CTGACCGGTTCGGCCTTGGGCAC 15392
|||||||||||| | ||||| |||||||| | || || | |||||| || |
Sbjct 5648 AACCCTGCGTGGGTGTTTTATGACCTGGTGCTGCACCCTTAC---TACGGCCTCGGCGAT 5704
Query 15393 CGTTTGACCGCTGCGAATATTGATAAATGGACGCTTTATCAGGTTGCTCAGTATTGTGAT 15452
|| | || ||| ||||| ||| ||||||||| | || || || || |||
Sbjct 5705 CGCATCGATGCCACGATGGTTGATCGCTGGTCGCTTTATCGCATCGCGCAATACTGCGAT 5764
Query 15453 CAGATGGTGCCAGACGGCAAAGGGGGCAACGGTACAGAACCACGTTATACCTGCAACGTG 15512
||||||||||| || || ||||| ||| | || || || | |||||||||| ||
Sbjct 5765 CAGATGGTGCCGGATGGAAAAGG------CGGCATGGAGCCGCGCTTTACCTGCAACCTG 5818
Query 15513 TACATTCAGGACCGGAACGACGCCTACACAGTCCTGCGTGATTTTGCCGCTATCTTCCGT 15572
||| | || | | | ||| |||||| | || |||| ||| | || | ||||| |
Sbjct 5819 TACCTGCAAAAGCAGGCCGAGGCCTACGCGGTGCTGCAGGATCTGGCATCGATCTTTCAC 5878
Query 15573 GGCATGACCTACTGGGGCGGGGATCAGATTGTGGCCCTGGCTGACATGCCGCGCGAT 15629
|| || ||||||||| ||| ||||| |||| | || || |||||| |||||
Sbjct 5879 GGTCTGGCCTACTGGGACGGCAGCCAGATCGTGGTCAACGCCGATATGCCGGGCGAT 5935
>seq2884985
Length=308
Score = 93.3 bits (102), Expect = 1e-14
Identities = 168/244 (69%), Gaps = 14/244 (6%)
Strand=Plus/Minus
Query 17666 CGCGGGGATGGGTATCGGCGTGGAGAATACGCCATCCGGCATGCAGTCGCAGGTTATCTT 17725
|||||| || || | || ||||||| | | |||| ||||||||||| | ||| |
Sbjct 291 CGCGGGTATCGGGCTTGGGTTGGAGAACGGGTCGGGCGGCCTGCAGTCGCAGTTCATCAT 232
Query 17726 CCTGGCTGATCGCTTCGCCGTCACCACGGCA-GCCGGTAACAGCGTGGCTTTGCCGTTTG 17784
| || || || |||||| || |||| ||||| || |||| || ||||
Sbjct 231 CGACGCCGACCGGTTCGCCATCG----GGCAAGCCGG---CATCGTG------CCCTTTG 185
Query 17785 TGATCCAGAATGGACAGACATTCATCCGGGCCAGTTTCATCCAGGACGGCACTATCAGCA 17844
| | ||| ||| ||||| ||||| | |||||||||||||||||| |||| ||
Sbjct 184 CGGTACAGGGTGGGCAGACTTTCATTAAATCGGCTTTCATCCAGGACGGCACGATCACCA 125
Query 17845 ACGCAAAGATTGGTAATTTTATCCAGTCGAACAATTATGTTGCTGGTTCTGCTGGCTGGA 17904
|||| ||||| || || | |||||||| || || || | | ||| ||||||||||
Sbjct 124 ACGCCAAGATCGGCAACTACATCCAGTCCAATAACTACGACCCAGGTAAGGCTGGCTGGA 65
Query 17905 AGCT 17908
||||
Sbjct 64 AGCT 61
>seq3088451
Length=13260
Score = 84.2 bits (92), Expect = 6e-12
Identities = 67/81 (83%), Gaps = 0/81 (0%)
Strand=Plus/Plus
Query 15127 GCTTCACCGAGGTGATTGACGCCAAACTGCGCTACCCGAACACCGCGCTGCTCTACGTCG 15186
||| |||| ||||||| ||||| || ||||||||||| |||||||||||||| | |||||
Sbjct 11818 GCTACACCCAGGTGATCGACGCAAAGCTGCGCTACCCAAACACCGCGCTGCTGTTCGTCG 11877
Query 15187 AATTCGACTCAAGCCAGTTCA 15207
| |||||| | |||||||
Sbjct 11878 AGTTCGACGCCGAGCAGTTCA 11898
>seq347631
Length=610
Score = 80.6 bits (88), Expect = 7e-11
Identities = 75/93 (81%), Gaps = 2/93 (2%)
Strand=Plus/Minus
Query 15099 AAGATCGGCGACACGATGATGCT-GCAGAGCTTCACCGAGGTGATTGACGCCAAACTGCG 15157
|| ||| |||||||||| | | || | ||||||| |||||||| |||||||| | ||
Sbjct 530 AAAATCTCCGACACGATGCAGATTGCCG-GCTTCACAGAGGTGATCGACGCCAAGATCCG 472
Query 15158 CTACCCGAACACCGCGCTGCTCTACGTCGAATT 15190
||||||||||||||| |||||||| |||| ||
Sbjct 471 TTACCCGAACACCGCGTTGCTCTACATCGAGTT 439
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 127898591787180
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |