Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09]
3,088,511 sequences; 2,785,377,831 total letters
Query= NC_019721.1
Length=40029
Score E
Sequences producing significant alignments: (Bits) Value
seq3088379 1110 0.0
seq3087926 131 4e-26
seq3087822 114 3e-21
seq3088451 95.1 3e-15
seq3088057 93.3 1e-14
seq3086781 82.4 2e-11
seq347631 82.4 2e-11
>seq3088379
Length=10556
Score = 1110 bits (1230), Expect = 0.0
Identities = 2152/3167 (68%), Gaps = 46/3167 (1%)
Strand=Plus/Plus
Query 1973 TCGATGACTTCATTTTCCGACCGCTGAGCATGTGATGGAAGAACCTAAATACACGATTGA 2032
|||| |||||| | | | ||||| ||||||||| |||| ||| | | |||| || ||
Sbjct 2099 TCGACGACTTCCTCTCCAGACCGATGAGCATGTAATGGCAGATACCGACTACAGCATCGA 2158
Query 2033 CCTGCGAACCAATAACGGCTGGTGGGCAAGGCTGCAGTCCTGGTTTGTCGGCGGGCGTTT 2092
|||||| || | | ||||| | || | || ||||||||||| || |
Sbjct 2159 CCTGCGCACGCGCAGTCCATTCTGGGCGCGTATGGCGAGCTTCTTTGTCGGCGGCCGCCT 2218
Query 2093 AGTCACCCCAAATCAGGGCTCACAGACGGGGCCTGTTTCGGCCCACGGACACCTGGGCGA 2152
||||| || | | || |||||||| || || || || ||||| || |||| ||
Sbjct 2219 GGTCACACCTGAAAAAGGTTCACAGACAGGCCCAGTATCAGCCCAGGGTGTAGTGGGTGA 2278
Query 2153 TTCATCCATTAACGATGAACGGATACTGCAAATTTCGACGGTTTGGCGCT-GCGTGAGCC 2211
||| | | |||||||| || || || || |||| || | |||| ||||| | |
Sbjct 2279 TTCGGTCGTAAACGATGAGCGCTCGCTCCAGATCGCGACCGTGTT-CGCTTGCGTGCGGC 2337
Query 2212 TGATTTCAACGCTCACGGCATGCTTACCGCTTGATGTCTTCGAAACCGACCAGAATGACA 2271
| || || | | || || ||| | || || || || ||| ||||| | | ||||
Sbjct 2338 TTATCTCCAGCGTGACAGCTTGCATGCCACTGGACGTTTTCCAAACCAAAGGCGAAGACA 2397
Query 2272 ACCGaaaaaaaGTGGGTTTGAGCAATCCGCTGGCGCGACTGCTGCGCTACTCACCGAATC 2331
| ||| || || || || |||||||||||||| || ||| || ||
Sbjct 2398 ---GGGTAAAGGTCGGGCTGGATAACCCGCTGGCGCGACTCCTTAAGTACCGCCCCAACG 2454
Query 2332 AGTACATGACCGCCCAGGAATTCAGAGAGGCCATGACGATGCAGCTCTGTTTCTACGGCA 2391
| | |||||| ||| || || | | ||||||||| |||||||| || | |||||||
Sbjct 2455 ACTTCATGACTGCCTTTGATTTTCGTGTGGCCATGACTATGCAGCTTTGCTATTACGGCA 2514
Query 2392 ACGCGTATGCACTGGTGGACCGCAACAGCGCAGGTGACGTGATCAGCCTTCTCCCGCTTC 2451
| || || || ||| | || ||||| | || || ||||| ||||| || | |||||
Sbjct 2515 ATGCCTACGCGCTGATTGAGCGCAATGGGGCTGGGGACGTAATCAGTCTAGTGCCGCTCA 2574
Query 2452 AGTCTGCCAATATGGATGTGAAACTCGTCGGaaaaaaaGTGGTTTATCGCTATCAACGCG 2511
||||| || |||||||| | | || || | ||||| || |||| ||||
Sbjct 2575 TGTCTGTGAACATGGATGTTCGCTTGGAGGGTAAGCGGATCGTTTACCGATATCGCCGCG 2634
Query 2512 ACAGCGAATACGCCGACTTTTCGCAGAGAGAGATTTTTCACCTTAAATGCTTCGGATTCA 2571
||| | | ||||| || || ||| || || ||||||||||| || | || || || |
Sbjct 2635 ACACCAAGTACGCAGATTTCAAGCAAAGCGATATTTTTCACCTGAAGGGTTTTGGTTTTA 2694
Query 2572 CCGGGCTGGTCGGCCTGTCCCCCATTGCTTTTGCCTGTAAATCGGCAGGTGTGGCAGTTG 2631
||| ||||| ||||| || || |||||||| || || | || ||||| || ||||
Sbjct 2695 ACGGCCTGGTTGGCCTTTCGCCGATTGCTTTCGCAGCGAAGACCGCCGGTGTAGCCGTTG 2754
Query 2632 CGATGGAGGACCAGCAGCGAGATTTCTTTGCCAACGGCGCCAAGTCTCCGCAAATCCTCT 2691
||||||| || |||||||| || || | ||||||||| |||||||| |||||| | ||
Sbjct 2755 CGATGGAAGATCAGCAGCGCGACTTTTATGCCAACGGTGCCAAGTCCCCGCAACTTCTTA 2814
Query 2692 CAACCGGCGA---AAAAGTGCTAACTGAACAGCAGCGCTCGCAGGTCGAAGAGAACTTCA 2748
|| || || ||| || || | | | ||||| |||| ||||| ||||| ||||
Sbjct 2815 TGACAGGGGATGGAAAGGTTCTCAACAAGGATCAGCGGGCGCAAGTCGAGGAGAATTTCA 2874
Query 2749 AAGAGATCGCCGGCGGTCCGGTTAAAAAACGCCTCTGGATTCTGGAAGCGGGCTTTTCCA 2808
| ||||| ||||||| || || || || || |||||||| |||| | || ||| | |
Sbjct 2875 AGGAGATATCCGGCGGGCCAGTCAAGAAGCGTCTCTGGATCTTGGAGGGAGGTTTTACGA 2934
Query 2809 CATCGGCAATTGGCGTAACGCCGCAGGATGCCGAAATGATGGCGTCCCGAAAATTTCAGG 2868
| ||| || ||||| | ||||| || ||||| | ||||| || |||| || ||||
Sbjct 2935 CCCAGGCCATAGGCGTGAGCCCGCAAGACGCCGAGACAATGGCTGCCAGAAAGTTCCAGG 2994
Query 2869 TAAGTGAACTGGCGCGATTCTTTGGCGTACCGCCTCACCTTGTCGGCGACGTCGAGAAAT 2928
| ||||| |||||||| ||||| ||||| ||||| || || || |||||||| || || |
Sbjct 2995 TGAGTGAGCTGGCGCGGTTCTTCGGCGTGCCGCCGCATCTGGTGGGCGACGTTGAAAAGT 3054
Query 2929 CAACGAGCTGGGGATCGGGCATCGAGCAGCAGAATCTCGGCTTCCTGCAGTACACCCTGC 2988
|||| |||||||| || || |||||||| ||||| || ||||| || |||||| | ||
Sbjct 3055 CAACCAGCTGGGGGTCAGGTATCGAGCAACAGAACCTGGGCTTTCTCCAGTACGCGCTCG 3114
Query 2989 AGCCCTATATCTCCCGGTGGGAAAACAGCATTCAGCGGTGGCTTATTCCTGCTAAGGATG 3048
| || || | ||||| | |||||| ||| |||||| | | | ||
Sbjct 3115 ACCCTTACCTTGAAATTTGGGAGGGCTGCATTCTGCGATGGCTTGTAAAGCCGAGCGACC 3174
Query 3049 TTGGCCGCATTCATGCTGAGCACAATCTCGACGGCCTGCTGAGGGGCGATTCGGCATCCC 3108
| || | |||||||||||||| | ||||| ||||||| || || || | |||
Sbjct 3175 TCGGGGTGTTCCATGCTGAGCACAACCGAGACGGGTTGCTGAGTGGTGACTCAACCGCCC 3234
Query 3109 GCGCTGCCTTTATGAAGGCAATGGGAGAGGCAGGGCTACGCACCATCAACGAAATGCGAC 3168
|||| | | || | || || | ||||| | || |||||| || |
Sbjct 3235 GCGCGAATTACCTAAAAACGTTGATTGATACCGGGCTGCTGACTCCCAACGAGGGCCGGC 3294
Query 3169 GAACGGACAACCTCCCGCCATTGCCGGGTGGCGATGTGGCAATGCGCCAGTCGCAATACG 3228
|| ||| ||| |||| || ||||| || || | ||||| |||||| |||
Sbjct 3295 GAGTCAGCAATAGGCCGAAGCTGCCCGGCGGCGACGTCGCCACACGCCAATCGCAAAACG 3354
Query 3229 TGCCGATC-ACCGATTTAGGAACCAACAAAGAGCCCCGTAA-TAACGGGGCTTAATTTTT 3286
||||| | | | | || | | ||||| ||||| | ||||| ||| |||||
Sbjct 3355 TGCCGCTTGATCAACTTGGTCA-----AAAGAACCCCGCCCCTGGCGGGGTTTAGTTTTT 3409
Query 3287 ATGGGGGC-CGTAATGCCTGAGATCGTAAAAACGCTGTCCTTCGACGAGACAGAAATCAA 3345
||| | | |||| | | || ||| || || | ||| |||||| |||||||
Sbjct 3410 CTGGAGCTACCCAATGGCAAATATTCAAAAGACCTTGGCGTTCACCGAGACTCAAATCAA 3469
Query 3346 ATTCACCGGTGACGGTAAACAGGGGATTTTTGAAGGCTACGCCTCTGTTTTTAATAACAC 3405
||| || || || || || | || || || |||||| |||||| | ||
Sbjct 3470 GTTCTCCTCGGATGGCAAGGTTGGTGTGTTCGAGGGGTACGCCAGTGTTTTCGACGTCAT 3529
Query 3406 CGATTCCGATGGCGACATCATTCTGCCCGGGGCGTTTAAAAACGCACTGGCGAACCAGAC 3465
||| || || ||||||||||| |||||||| || || || || || || | || |
Sbjct 3530 CGACTCAGACGGCGACATCATCCTGCCCGGCGCCTTCAAGAAGGCTTTGTCTTCGCAAAG 3589
Query 3466 CCGCAAAGTGGCGATGTTTTTCAACCACAAGACGTGGGAGCTGCCGGTTGGTAAATGGGA 3525
|||| |||| | |||||||| ||||| |||| | | ||||| ||||| || ||| |
Sbjct 3590 CCGCCAAGTCGGCATGTTTTTTAACCATCAGACCTACGGCCTGCCTGTTGGAAAGTGGCA 3649
Query 3526 CAGCCTGGCAGAAGACGAAAAAGGCCTGTATGTGCGCGGTCAACTTACCCCAGGGCACAG 3585
||||| || ||| ||||| || | || | || | || || || ||
Sbjct 3650 GTCGCTGGCGGAGGACAGCAAAGGACTCTTCGTTGGAGGCGAGCTGACGCCCGGTTTGTC 3709
Query 3586 CGGCGCCGCCGACCTGAAAGCGGCAATGCAGCACGGTACGGTTGAAGGTATGTCGGTTGG 3645
| | || |||||| || || ||| | || || || || ||| ||||||||||
Sbjct 3710 GGTCTCCAACGACCTCCGGGCAGCCATGGAACATAAGACCGTCGAGGGTTTGTCGGTTGG 3769
Query 3646 CTTTTCCGTTGCGAAAGACGATTACACCATCATTCCAACAGGCCGCATTTTTAAGAATAT 3705
||| |||| || ||||||||| || |||| || |||||| || | ||| |
Sbjct 3770 CTTCACCGTCCTCAAGGACGATTACGCCGTCATCGATACCGGCCGCGCATTCAGCAATGT 3829
Query 3706 CCAGGCTCTGCGCGAAATCAGCGTCTGCACTTTCCCCGCCAACGAACAGGCTGGCATCGC 3765
|||||| ||||| || |||||| | ||||| || || ||||| || ||||| ||| |
Sbjct 3830 CCAGGCCCTGCGAGAGATCAGCATTTGCACCTTTCCTGCCAATGAGCAGGCGACCATTGA 3889
Query 3766 AGCCATGAAAAGTGTCGATGGCATTGAA----ACGATCCGTGATGTTGAGAACTGGCTGA 3821
||||||||||| |||| || || || || || ||||| ||| | |||||||
Sbjct 3890 CGCCATGAAAAGC----ATGGAATCGATCAGCACCATTCGCGATGTAGAGCATTGGCTGA 3945
Query 3822 GGGATTCAGTCGGCCTCACCAAATCACAGGCAGTAGGGCTAATAGCCCGGTTTAAGTCAG 3881
||||||| | ||| || | || || || || | || || ||||||||| | ||||| |
Sbjct 3946 GGGATTCGGCCGGTCTTTCGAAGTCGCAAGCCCTGGGCCTGATAGCCCGGATCAAGTCCG 4005
Query 3882 CGATTCGGAGCGAGTCCGAGGGCGACGGAAACGAAGCACAAATCAACGCTCTGCTTCAGA 3941
| ||||||| || ||||| || | || |||||| ||| | || |
Sbjct 4006 CAGTTCGGAGTGATTCCGAAGGTGGCG------------AAATCACCGCGATCCTGGATC 4053
Query 3942 GCATCAAATCTTTCCCTTCTAATTTAGGTAATTAATT-ATGTCTGAACTCGCTCTCATTC 4000
||||||| || ||||| ||| |||| |||||| ||||| ||| | || | ||||
Sbjct 4054 GCATCAAGTCATTCCCATCTG---TAGGAAATTAAACCATGTCCGAATTGGCCCAAATTC 4110
Query 4001 AAAAAGCTATCGAAGAATCCCAGCAGAAAATGTCTCAACTTTTCGATGCGCAGAAAGCAG 4060
|||| || |||||| | || ||| ||| || | || ||||| ||||| || ||
Sbjct 4111 AAAAGGCAATCGAAACCGCGCAAACGAACATGACTGAGCTGTTCGAGGCGCAAAAGAAAG 4170
Query 4061 AAATCGAAAGCACTGGCCAGGTTTCCAAACAGCTGCAGTCCGACCTGGCAAAAGTGCAGG 4120
| ||| ||| ||| | || ||| || | || |||||||| | ||||||||
Sbjct 4171 AGATCACCGCCACCGGCGAAGTGAGCAAGAAGATTCAAACCGACCTGCAGACAGTGCAGG 4230
Query 4121 AAGAACTGACCAAATCCGGTGCGCGTCTCTTCGATCTGGAACAGAAACTGGCTTCCGGTG 4180
| ||||||| | |||| | || | |||||||| || ||| || || |||
Sbjct 4231 ACGAACTGAAAACGGCCGGCTCCCGCTTGTTCGATCTCGAGTCGAAGCTTGCCGGCGGCA 4290
Query 4181 CT---GAAAATCCGGGTGAGAAGAAATCCTTCTCTGAACGTGCTGCGGAAGAGCTCATCA 4237
|| || || || | | |||||||| ||| |||| || || || ||||| || | |
Sbjct 4291 CTCTCGATAACCCTGAAGCCAAGAAATCGTTCGCTGAGCGGGCGGCCGAAGATCTGAAGA 4350
Query 4238 AGTCATGGGACGG---TAAACAGGGCACCTTCGACGCGAAGACGTTTAACAAGTCTCTCG 4294
|| ||| |||| || |||| | |||| || | || | |||| ||||||
Sbjct 4351 AGGGCTGGAACGGCTCTACGTCCGGCAAAGTGGACGTGATTAGCTTCAGCAAGGCTCTCG 4410
Query 4295 GCAGTGACGCTGATTCTGCTGGCTCACTGATCCAGCCGATGCAGATCCCCGGCATCATCA 4354
|| | ||| | ||||||||| | || ||||||| ||||| ||||||||| |||
Sbjct 4411 GCGCAGGCGCCGCTTCTGCTGGTGCGTTGGTCCAGCCCCAGCAGAACCCCGGCATTCTCA 4470
Query 4355 TGCCAGGACTGCGCCGTCTGACCATTCGTGACCTGCTGGCGCAGGGCCGCATCTCCAGCA 4414
|||| || |||||||| |||||||| ||||||||||||||||| || |||| | |
Sbjct 4471 TGCCCGGCCTGCGCCGGCTGACCATCCGTGACCTGCTGGCGCAAGGTCGCACGACTTCCG 4530
Query 4415 ACGCTCTGGAATACGTCCGTGAAGAGGTGTTTACCAATAACGCCGACGTGGTGGCCGAGA 4474
|||| | || ||||| || || | || || | ||| | ||||| ||| ||||||
Sbjct 4531 ACGCCATCGAGTACGTGCGCGAGAACGTATTCATCAACAGCGCCGCTCCGGTCGCCGAGG 4590
Query 4475 AAGCGCTGAAGCCCGAATCGGATATCACCTTCAGTAAGCAAACCGCGAACGTGAAGACGA 4534
||||||||||||| || | | ||||||| ||| |||| || ||||| ||||||
Sbjct 4591 GCACGCTGAAGCCCGAGTCCAACCTGACCTTCACCAAGGAAACGGCCAACGTCAAGACGC 4650
Query 4535 TCGCCCACTGGGTGCAGGCATCGCGTCAGGTTATGGACGATGCGCCAATGCTGCAGTCAT 4594
| || |||||| | ||||| || || ||| | ||| || || || |||||| | || |
Sbjct 4651 TGGCTCACTGGATTCAGGCTTCTCGCCAGATCATGTCTGACGCTCCGATGCTGGAATCCT 4710
Query 4595 ACGTCAACAACCGCCTCATGTACGGCCTGGCGCTGAAGGAGGAAGGTCAACTGCTGAACG 4654
| || ||| ||||| ||| || |||| || || ||||| || || || ||||
Sbjct 4711 ATGTGAACGGTCGCCTGTTGTTTGGTCTGGACTTGGTCGAAGAAGGGCAGCTTCTCAACG 4770
Query 4655 GTGACGGTACCGGGGATAACATCGAAGGTTTGAACAAAGTGGCCACCGCTTACGACACCT 4714
| || || ||||| || ||| | || |||||||||| || ||||| ||||||||
Sbjct 4771 GCGATGGCACCGGTGACAACCTGATCGGCCTGAACAAAGTCGCGACCGCCTACGACACTA 4830
Query 4715 CGCTGAATGCCACTGGCGACACCCGCGCTGACATTATCGCTCACGCTATTTATCAGGTGA 4774
|||| |||||||| |||||||| ||||||||| || || ||||| || | ||| |
Sbjct 4831 CGCTCAATGCCACCGGCGACACTCGCGCTGACCAGATTGCACACGCGATCTTCCAGACCA 4890
Query 4775 CAGAGTCTGAGTTTAGCGCTTCCGGTATTGTCCTGAACCCGCGGGACTGGCACAACATCG 4834
|| || ||||| ||||| || | || ||||||| || ||||||||| |||||
Sbjct 4891 GCGAATCCGAGTTCGAGGCTTCGGGCCTGATCTTGAACCCCCGCGACTGGCACGCCATCG 4950
Query 4835 CGCTGCTGAAAGACAATGAAGGCCGCTATATCTTCGGTGGTCCTCAGGCGTTTACCAGCA 4894
|||||||||||||| ||| || || || ||||| || || ||| |||||| || ||
Sbjct 4951 CGCTGCTGAAAGACGGTGATGGTCGTTACATCTTTGGCGGCCCTGCGGCGTTCGCCGCCA 5010
Query 4895 ACATCATGTGGGGCCTGCCAGTGGTTCCGACTAAGGCGCAGGCCGCCGGCACCTTTACGG 4954
| |||||||||| || || || ||| | || || || ||||| || || || || |
Sbjct 5011 AGGTCATGTGGGGGCTTCCTGTTGTTGCCACCAAAGCCCAGGCACAGGGAACTTTCACTG 5070
Query 4955 TGGGCGGTTTCGATATGGCCTCTCAGGTCTGGGATCGCATGAATGCCACCGTGGAAGTCA 5014
| ||||| ||||| ||||| || ||| ||||||| |||||| | || || | || |||
Sbjct 5071 TTGGCGGCTTCGACATGGCTTCGCAGATCTGGGACCGCATGGACGCGACTATCGAGATCA 5130
Query 5015 GCCGTGACGACCGCGACAACTTCGTGAAAAACATGCTGACCATTCTGTGCGAAGAGCGCC 5074
|| | || |||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 5131 GCAACCAGGATCGCGACAACTTCGTGAAAAACATGCTGACCATCCTGTGCGAAGAGCGCC 5190
Query 5075 TGGCGCTGGCGCACTATCGCCCGGCGGCCATCATCAAGGGCACTTTC 5121
||||| | | |||||||| || | || |||||||| ||| |||||
Sbjct 5191 TGGCGGTTACCCACTATCGTCCTACCGCAATCATCAAAGGCGCTTTC 5237
>seq3087926
Length=6391
Score = 131 bits (144), Expect = 4e-26
Identities = 324/484 (67%), Gaps = 12/484 (2%)
Strand=Plus/Minus
Query 12195 GATCCGTCGCTGGATGAATGCAACGGCACGCTGACGGCCTGCAAACTTCGGTTCGGTGAA 12254
|||||| | |||| | ||||| ||| ||| || ||||||| | || ||||| ||
Sbjct 5396 GATCCGGCCAAGGATCAGTGCAAGGGCTGCCTGTCGTCCTGCAAGTTGCGATTCGGCGAG 5337
Query 12255 AATAACGAGCTCTCGTTTGGTGGGTTCCCTGGCACGTCTTTGAT---CAGGAGCTGAT-A 12310
|| ||||| || || ||||| || ||||| | | |||| | || | |||||||| |
Sbjct 5336 AACAACGAACTGTCCTTTGGCGGATTCCCCGCCGTGTCTCTCATTGCCCGGAGCTGACCA 5277
Query 12311 TGCGGCAGAAAACCATTGATGCCATTATGGCGCATGCTGCAGCTGAATATCCTCGCGAGT 12370
|||| || | | ||||| ||||| ||||||||| || | || ||||| || ||||
Sbjct 5276 TGCGCAAGCACATCATTGCGGCCATCCAGGCGCATGCGGCGACGGAGTATCCGCGAGAGT 5217
Query 12371 GCTGCGGCGTGGTGGCGCAGAAAAGCCGTGTTGAACGTTATTTCCCGTGCCGCAATCTTG 12430
|||||||| || || | |||| | | || ||||||||||| || | |
Sbjct 5216 GCTGCGGCCTGCTGTTGGCCGTGGGCCGCGCGCAGAAGTACTTCCCGTGCCGGAACATAG 5157
Query 12431 CCACGGAACCGGAGGACAATTTTGTCCTCTGCCCGGAAGATTACGCAGCTGCTGAGGACT 12490
||| ||| ||| | || | || || ||| || || ||||| || || || ||||
Sbjct 5156 CCAAGGAGCCGAACGAAGAGTTCCGGCTTGACCCCGAGGACTACGCCGCGGCGGAAGACT 5097
Query 12491 GGGGCACGGTGATCGCCATCGCTCACAGTCACCCTGATGCCACGACACAGCCGAGCGAAC 12550
|||| |||||||| ||||| ||| ||||| || ||||| | ||| | | ||
Sbjct 5096 TGGGCGAGGTGATCGGCATCGTCCACTCGCACCCGGACGCCACCA-GCAG--GCCCTCAC 5040
Query 12551 TGGATAA---AGCGCAATGCGATGCAACGCTTTTACCCTGGCATATTGTGAGCTGGCCGG 12607
| || | || || || || ||| ||| || ||||| || || ||||| |
Sbjct 5039 CGCATGACTTGGCCATGTGTGAGGCCACGGCTTTGCCATGGCACATCCTGTCTTGGCCCG 4980
Query 12608 AGGGTGATTTACGCACCATCCAGCC-GCGTGGAGAACTGCCGTTGCTGGAGCGTCCGTTT 12666
||||||| | ||||| || ||| ||| | || || |||| |||| |||| |||||
Sbjct 4979 AGGGTGACTGGCGCACGATTACGCCGGCGGGTAGCAC-GCCGCTGCTCAAGCGCCCGTTC 4921
Query 12667 GTGC 12670
||||
Sbjct 4920 GTGC 4917
>seq3087822
Length=6084
Score = 114 bits (126), Expect = 3e-21
Identities = 228/336 (68%), Gaps = 4/336 (1%)
Strand=Plus/Minus
Query 12202 CGCTGGATGAATGCAACGGCACGCTGACGGCCTGCAAACTTCGGTTCGGTGAAAATAACG 12261
|||| || | ||||| ||| ||| || ||||||| | || ||||| ||||| ||||
Sbjct 2105 CGCTTGACCAGTGCAAGGGCTGTCTGTCGTCCTGCAAGTTGCGCTTCGGCGAAAACAACG 2046
Query 12262 AGCTCTCGTTTGGTGGGTTCCCTGGCACGTCTTTGAT---CAGGAGCTGA-TATGCGGCA 12317
| || || || ||||| ||||| | | || |||| | |||||||| |||||| |
Sbjct 2045 AACTGTCCTTCGGTGGATTCCCCGCCGTTTCCCTGATTGTCCGGAGCTGACTATGCGCAA 1986
Query 12318 GAAAACCATTGATGCCATTATGGCGCATGCTGCAGCTGAATATCCTCGCGAGTGCTGCGG 12377
| | | ||||| || ||| |||||| || || || |||||||| ||||| ||||||||
Sbjct 1985 GCACATCATTGCCGCTATTCAGGCGCACGCGGCGGCGGAATATCCGCGCGAATGCTGCGG 1926
Query 12378 CGTGGTGGCGCAGAAAAGCCGTGTTGAACGTTATTTCCCGTGCCGCAATCTTGCCACGGA 12437
|| || | |||| | | | || ||||||||||| || | ||||||||
Sbjct 1925 GCTGCTGCTGGCCGTGGGCCGCGCTCAGAAGTACTTCCCGTGCCGGAACATCGCCACGGA 1866
Query 12438 ACCGGAGGACAATTTTGTCCTCTGCCCGGAAGATTACGCAGCTGCTGAGGACTGGGGCAC 12497
||| || | || ||| || || | ||||| || || ||||||| ||||
Sbjct 1865 GCCGAGCGAAGAGTTCAAGCTCGATCCCGAGGGCTACGCTGCGGCAGAGGACTTGGGCGA 1806
Query 12498 GGTGATCGCCATCGCTCACAGTCACCCTGATGCCAC 12533
|||||||| || | ||| ||||| || || ||
Sbjct 1805 GGTGATCGGTATAGTCCACTCACACCCGGACGCAAC 1770
>seq3088451
Length=13260
Score = 95.1 bits (104), Expect = 3e-15
Identities = 140/195 (72%), Gaps = 5/195 (3%)
Strand=Plus/Plus
Query 10823 AACGCCAAAGGCGGCGTTTATGACTCTCAATCCCTGAGTGCTTTCAGTAACGGGATCGTC 10882
||||||||||||||||| || ||||||| | |||| |||||| ||| | | |
Sbjct 8297 AACGCCAAAGGCGGCGTGTACGACTCTCCAAGCCTGTCGAGTTTCAGCAACCAGGTGCAC 8356
Query 10883 -AGAAACCCCACCATGTTCGCTTTCGCAAAAGGCGGGGCCGGAATCATGGGCGAGGCTGG 10941
| || || || |||||||||||||| || |||| || | || | | ||| || ||
Sbjct 8357 GACAAGCCGCAG-ATGTTCGCTTTCGCGAAGGGCGCGG---GGATATTCGCCGAAGCCGG 8412
Query 10942 ACCGGAGGCGATCATGCCGCTTACCCGCGCGCCGGATGGTTCTCTCGGCGTTCGTGCGGT 11001
|| ||||||||||||||||||||| | || ||| || || || ||||| ||| |
Sbjct 8413 GCCAGAGGCGATCATGCCGCTTACCAGGACGGCGGGCGGCGAGCTTGGGGTTCGGGCGTT 8472
Query 11002 CGGCGGCGGTAGCGG 11016
|| |||||| ||||
Sbjct 8473 GGGTGGCGGTGGCGG 8487
>seq3088057
Length=7030
Score = 93.3 bits (102), Expect = 1e-14
Identities = 209/313 (67%), Gaps = 12/313 (4%)
Strand=Plus/Plus
Query 15001 AATCCTGCGTGGATTTTTTACGACCTGGTTGTTT---CTGACCGGTTCGGCCTCGGTCAC 15057
|| ||||||||| | ||||| |||||||| | || || | ||||||||| |
Sbjct 5648 AACCCTGCGTGGGTGTTTTATGACCTGGTGCTGCACCCTTAC---TACGGCCTCGGCGAT 5704
Query 15058 CGTTTGACTGCTGCGAATATCGATAAATGGACGCTTTATCAGGTTGCTCAGTATTGTGAT 15117
|| | ||| ||| | ||| ||| ||||||||| | || || || || |||
Sbjct 5705 CGCATCGATGCCACGATGGTTGATCGCTGGTCGCTTTATCGCATCGCGCAATACTGCGAT 5764
Query 15118 CAGATGGTACCAGACGGCAAAGGGGGCAACGGTACCGAACCACGTTATACCTGCAACGTG 15177
|||||||| || || || ||||| ||| | || || || | |||||||||| ||
Sbjct 5765 CAGATGGTGCCGGATGGAAAAGG------CGGCATGGAGCCGCGCTTTACCTGCAACCTG 5818
Query 15178 TACATTCAGGACCGGAACGACGCCTACACAGTCCTGCGTGATTTTGCCGCTATCTTCCGA 15237
||| | || | | | ||| |||||| | || |||| ||| | || | ||||| |
Sbjct 5819 TACCTGCAAAAGCAGGCCGAGGCCTACGCGGTGCTGCAGGATCTGGCATCGATCTTTCAC 5878
Query 15238 GGCATGACCTACTGGGGCGGGGATCAGATTGTGGCCCTGGCTGACATGCCGCGCGATGTT 15297
|| || ||||||||| ||| ||||| |||| | || || |||||| |||||
Sbjct 5879 GGTCTGGCCTACTGGGACGGCAGCCAGATCGTGGTCAACGCCGATATGCCGGGCGATCCG 5938
Query 15298 GATTACAGCTACA 15310
| |||| |||||
Sbjct 5939 GTGTACACCTACA 5951
>seq3086781
Length=4259
Score = 82.4 bits (90), Expect = 2e-11
Identities = 57/65 (88%), Gaps = 0/65 (0%)
Strand=Plus/Minus
Query 14792 GCTTCACCGAGGTGATTGACGCCAAACTACGTTACCCCAACACCGCGCTGCTCTACATCG 14851
|||||||||||||||| ||||| || | |||||||| |||||||| |||||||||||||
Sbjct 1892 GCTTCACCGAGGTGATCGACGCGAAGATCCGTTACCCGAACACCGCACTGCTCTACATCG 1833
Query 14852 AATTC 14856
| |||
Sbjct 1832 AGTTC 1828
>seq347631
Length=610
Score = 82.4 bits (90), Expect = 2e-11
Identities = 70/84 (83%), Gaps = 2/84 (2%)
Strand=Plus/Minus
Query 14773 GACACGATGACGCT-GCAGAGCTTCACCGAGGTGATTGACGCCAAACTACGTTACCCCAA 14831
||||||||| | | || | ||||||| |||||||| |||||||| | |||||||| ||
Sbjct 521 GACACGATGCAGATTGCCG-GCTTCACAGAGGTGATCGACGCCAAGATCCGTTACCCGAA 463
Query 14832 CACCGCGCTGCTCTACATCGAATT 14855
||||||| ||||||||||||| ||
Sbjct 462 CACCGCGTTGCTCTACATCGAGTT 439
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 123277719550762
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |