Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09] 3,088,511 sequences; 2,785,377,831 total letters Query= NC_019721.1 Length=40029 Score E Sequences producing significant alignments: (Bits) Value seq3088379 1110 0.0 seq3087926 131 4e-26 seq3087822 114 3e-21 seq3088451 95.1 3e-15 seq3088057 93.3 1e-14 seq3086781 82.4 2e-11 seq347631 82.4 2e-11 >seq3088379 Length=10556 Score = 1110 bits (1230), Expect = 0.0 Identities = 2152/3167 (68%), Gaps = 46/3167 (1%) Strand=Plus/Plus Query 1973 TCGATGACTTCATTTTCCGACCGCTGAGCATGTGATGGAAGAACCTAAATACACGATTGA 2032 |||| |||||| | | | ||||| ||||||||| |||| ||| | | |||| || || Sbjct 2099 TCGACGACTTCCTCTCCAGACCGATGAGCATGTAATGGCAGATACCGACTACAGCATCGA 2158 Query 2033 CCTGCGAACCAATAACGGCTGGTGGGCAAGGCTGCAGTCCTGGTTTGTCGGCGGGCGTTT 2092 |||||| || | | ||||| | || | || ||||||||||| || | Sbjct 2159 CCTGCGCACGCGCAGTCCATTCTGGGCGCGTATGGCGAGCTTCTTTGTCGGCGGCCGCCT 2218 Query 2093 AGTCACCCCAAATCAGGGCTCACAGACGGGGCCTGTTTCGGCCCACGGACACCTGGGCGA 2152 ||||| || | | || |||||||| || || || || ||||| || |||| || Sbjct 2219 GGTCACACCTGAAAAAGGTTCACAGACAGGCCCAGTATCAGCCCAGGGTGTAGTGGGTGA 2278 Query 2153 TTCATCCATTAACGATGAACGGATACTGCAAATTTCGACGGTTTGGCGCT-GCGTGAGCC 2211 ||| | | |||||||| || || || || |||| || | |||| ||||| | | Sbjct 2279 TTCGGTCGTAAACGATGAGCGCTCGCTCCAGATCGCGACCGTGTT-CGCTTGCGTGCGGC 2337 Query 2212 TGATTTCAACGCTCACGGCATGCTTACCGCTTGATGTCTTCGAAACCGACCAGAATGACA 2271 | || || | | || || ||| | || || || || ||| ||||| | | |||| Sbjct 2338 TTATCTCCAGCGTGACAGCTTGCATGCCACTGGACGTTTTCCAAACCAAAGGCGAAGACA 2397 Query 2272 ACCGaaaaaaaGTGGGTTTGAGCAATCCGCTGGCGCGACTGCTGCGCTACTCACCGAATC 2331 | ||| || || || || |||||||||||||| || ||| || || Sbjct 2398 ---GGGTAAAGGTCGGGCTGGATAACCCGCTGGCGCGACTCCTTAAGTACCGCCCCAACG 2454 Query 2332 AGTACATGACCGCCCAGGAATTCAGAGAGGCCATGACGATGCAGCTCTGTTTCTACGGCA 2391 | | |||||| ||| || || | | ||||||||| |||||||| || | ||||||| Sbjct 2455 ACTTCATGACTGCCTTTGATTTTCGTGTGGCCATGACTATGCAGCTTTGCTATTACGGCA 2514 Query 2392 ACGCGTATGCACTGGTGGACCGCAACAGCGCAGGTGACGTGATCAGCCTTCTCCCGCTTC 2451 | || || || ||| | || ||||| | || || ||||| ||||| || | ||||| Sbjct 2515 ATGCCTACGCGCTGATTGAGCGCAATGGGGCTGGGGACGTAATCAGTCTAGTGCCGCTCA 2574 Query 2452 AGTCTGCCAATATGGATGTGAAACTCGTCGGaaaaaaaGTGGTTTATCGCTATCAACGCG 2511 ||||| || |||||||| | | || || | ||||| || |||| |||| Sbjct 2575 TGTCTGTGAACATGGATGTTCGCTTGGAGGGTAAGCGGATCGTTTACCGATATCGCCGCG 2634 Query 2512 ACAGCGAATACGCCGACTTTTCGCAGAGAGAGATTTTTCACCTTAAATGCTTCGGATTCA 2571 ||| | | ||||| || || ||| || || ||||||||||| || | || || || | Sbjct 2635 ACACCAAGTACGCAGATTTCAAGCAAAGCGATATTTTTCACCTGAAGGGTTTTGGTTTTA 2694 Query 2572 CCGGGCTGGTCGGCCTGTCCCCCATTGCTTTTGCCTGTAAATCGGCAGGTGTGGCAGTTG 2631 ||| ||||| ||||| || || |||||||| || || | || ||||| || |||| Sbjct 2695 ACGGCCTGGTTGGCCTTTCGCCGATTGCTTTCGCAGCGAAGACCGCCGGTGTAGCCGTTG 2754 Query 2632 CGATGGAGGACCAGCAGCGAGATTTCTTTGCCAACGGCGCCAAGTCTCCGCAAATCCTCT 2691 ||||||| || |||||||| || || | ||||||||| |||||||| |||||| | || Sbjct 2755 CGATGGAAGATCAGCAGCGCGACTTTTATGCCAACGGTGCCAAGTCCCCGCAACTTCTTA 2814 Query 2692 CAACCGGCGA---AAAAGTGCTAACTGAACAGCAGCGCTCGCAGGTCGAAGAGAACTTCA 2748 || || || ||| || || | | | ||||| |||| ||||| ||||| |||| Sbjct 2815 TGACAGGGGATGGAAAGGTTCTCAACAAGGATCAGCGGGCGCAAGTCGAGGAGAATTTCA 2874 Query 2749 AAGAGATCGCCGGCGGTCCGGTTAAAAAACGCCTCTGGATTCTGGAAGCGGGCTTTTCCA 2808 | ||||| ||||||| || || || || || |||||||| |||| | || ||| | | Sbjct 2875 AGGAGATATCCGGCGGGCCAGTCAAGAAGCGTCTCTGGATCTTGGAGGGAGGTTTTACGA 2934 Query 2809 CATCGGCAATTGGCGTAACGCCGCAGGATGCCGAAATGATGGCGTCCCGAAAATTTCAGG 2868 | ||| || ||||| | ||||| || ||||| | ||||| || |||| || |||| Sbjct 2935 CCCAGGCCATAGGCGTGAGCCCGCAAGACGCCGAGACAATGGCTGCCAGAAAGTTCCAGG 2994 Query 2869 TAAGTGAACTGGCGCGATTCTTTGGCGTACCGCCTCACCTTGTCGGCGACGTCGAGAAAT 2928 | ||||| |||||||| ||||| ||||| ||||| || || || |||||||| || || | Sbjct 2995 TGAGTGAGCTGGCGCGGTTCTTCGGCGTGCCGCCGCATCTGGTGGGCGACGTTGAAAAGT 3054 Query 2929 CAACGAGCTGGGGATCGGGCATCGAGCAGCAGAATCTCGGCTTCCTGCAGTACACCCTGC 2988 |||| |||||||| || || |||||||| ||||| || ||||| || |||||| | || Sbjct 3055 CAACCAGCTGGGGGTCAGGTATCGAGCAACAGAACCTGGGCTTTCTCCAGTACGCGCTCG 3114 Query 2989 AGCCCTATATCTCCCGGTGGGAAAACAGCATTCAGCGGTGGCTTATTCCTGCTAAGGATG 3048 | || || | ||||| | |||||| ||| |||||| | | | || Sbjct 3115 ACCCTTACCTTGAAATTTGGGAGGGCTGCATTCTGCGATGGCTTGTAAAGCCGAGCGACC 3174 Query 3049 TTGGCCGCATTCATGCTGAGCACAATCTCGACGGCCTGCTGAGGGGCGATTCGGCATCCC 3108 | || | |||||||||||||| | ||||| ||||||| || || || | ||| Sbjct 3175 TCGGGGTGTTCCATGCTGAGCACAACCGAGACGGGTTGCTGAGTGGTGACTCAACCGCCC 3234 Query 3109 GCGCTGCCTTTATGAAGGCAATGGGAGAGGCAGGGCTACGCACCATCAACGAAATGCGAC 3168 |||| | | || | || || | ||||| | || |||||| || | Sbjct 3235 GCGCGAATTACCTAAAAACGTTGATTGATACCGGGCTGCTGACTCCCAACGAGGGCCGGC 3294 Query 3169 GAACGGACAACCTCCCGCCATTGCCGGGTGGCGATGTGGCAATGCGCCAGTCGCAATACG 3228 || ||| ||| |||| || ||||| || || | ||||| |||||| ||| Sbjct 3295 GAGTCAGCAATAGGCCGAAGCTGCCCGGCGGCGACGTCGCCACACGCCAATCGCAAAACG 3354 Query 3229 TGCCGATC-ACCGATTTAGGAACCAACAAAGAGCCCCGTAA-TAACGGGGCTTAATTTTT 3286 ||||| | | | | || | | ||||| ||||| | ||||| ||| ||||| Sbjct 3355 TGCCGCTTGATCAACTTGGTCA-----AAAGAACCCCGCCCCTGGCGGGGTTTAGTTTTT 3409 Query 3287 ATGGGGGC-CGTAATGCCTGAGATCGTAAAAACGCTGTCCTTCGACGAGACAGAAATCAA 3345 ||| | | |||| | | || ||| || || | ||| |||||| ||||||| Sbjct 3410 CTGGAGCTACCCAATGGCAAATATTCAAAAGACCTTGGCGTTCACCGAGACTCAAATCAA 3469 Query 3346 ATTCACCGGTGACGGTAAACAGGGGATTTTTGAAGGCTACGCCTCTGTTTTTAATAACAC 3405 ||| || || || || || | || || || |||||| |||||| | || Sbjct 3470 GTTCTCCTCGGATGGCAAGGTTGGTGTGTTCGAGGGGTACGCCAGTGTTTTCGACGTCAT 3529 Query 3406 CGATTCCGATGGCGACATCATTCTGCCCGGGGCGTTTAAAAACGCACTGGCGAACCAGAC 3465 ||| || || ||||||||||| |||||||| || || || || || || | || | Sbjct 3530 CGACTCAGACGGCGACATCATCCTGCCCGGCGCCTTCAAGAAGGCTTTGTCTTCGCAAAG 3589 Query 3466 CCGCAAAGTGGCGATGTTTTTCAACCACAAGACGTGGGAGCTGCCGGTTGGTAAATGGGA 3525 |||| |||| | |||||||| ||||| |||| | | ||||| ||||| || ||| | Sbjct 3590 CCGCCAAGTCGGCATGTTTTTTAACCATCAGACCTACGGCCTGCCTGTTGGAAAGTGGCA 3649 Query 3526 CAGCCTGGCAGAAGACGAAAAAGGCCTGTATGTGCGCGGTCAACTTACCCCAGGGCACAG 3585 ||||| || ||| ||||| || | || | || | || || || || Sbjct 3650 GTCGCTGGCGGAGGACAGCAAAGGACTCTTCGTTGGAGGCGAGCTGACGCCCGGTTTGTC 3709 Query 3586 CGGCGCCGCCGACCTGAAAGCGGCAATGCAGCACGGTACGGTTGAAGGTATGTCGGTTGG 3645 | | || |||||| || || ||| | || || || || ||| |||||||||| Sbjct 3710 GGTCTCCAACGACCTCCGGGCAGCCATGGAACATAAGACCGTCGAGGGTTTGTCGGTTGG 3769 Query 3646 CTTTTCCGTTGCGAAAGACGATTACACCATCATTCCAACAGGCCGCATTTTTAAGAATAT 3705 ||| |||| || ||||||||| || |||| || |||||| || | ||| | Sbjct 3770 CTTCACCGTCCTCAAGGACGATTACGCCGTCATCGATACCGGCCGCGCATTCAGCAATGT 3829 Query 3706 CCAGGCTCTGCGCGAAATCAGCGTCTGCACTTTCCCCGCCAACGAACAGGCTGGCATCGC 3765 |||||| ||||| || |||||| | ||||| || || ||||| || ||||| ||| | Sbjct 3830 CCAGGCCCTGCGAGAGATCAGCATTTGCACCTTTCCTGCCAATGAGCAGGCGACCATTGA 3889 Query 3766 AGCCATGAAAAGTGTCGATGGCATTGAA----ACGATCCGTGATGTTGAGAACTGGCTGA 3821 ||||||||||| |||| || || || || || ||||| ||| | ||||||| Sbjct 3890 CGCCATGAAAAGC----ATGGAATCGATCAGCACCATTCGCGATGTAGAGCATTGGCTGA 3945 Query 3822 GGGATTCAGTCGGCCTCACCAAATCACAGGCAGTAGGGCTAATAGCCCGGTTTAAGTCAG 3881 ||||||| | ||| || | || || || || | || || ||||||||| | ||||| | Sbjct 3946 GGGATTCGGCCGGTCTTTCGAAGTCGCAAGCCCTGGGCCTGATAGCCCGGATCAAGTCCG 4005 Query 3882 CGATTCGGAGCGAGTCCGAGGGCGACGGAAACGAAGCACAAATCAACGCTCTGCTTCAGA 3941 | ||||||| || ||||| || | || |||||| ||| | || | Sbjct 4006 CAGTTCGGAGTGATTCCGAAGGTGGCG------------AAATCACCGCGATCCTGGATC 4053 Query 3942 GCATCAAATCTTTCCCTTCTAATTTAGGTAATTAATT-ATGTCTGAACTCGCTCTCATTC 4000 ||||||| || ||||| ||| |||| |||||| ||||| ||| | || | |||| Sbjct 4054 GCATCAAGTCATTCCCATCTG---TAGGAAATTAAACCATGTCCGAATTGGCCCAAATTC 4110 Query 4001 AAAAAGCTATCGAAGAATCCCAGCAGAAAATGTCTCAACTTTTCGATGCGCAGAAAGCAG 4060 |||| || |||||| | || ||| ||| || | || ||||| ||||| || || Sbjct 4111 AAAAGGCAATCGAAACCGCGCAAACGAACATGACTGAGCTGTTCGAGGCGCAAAAGAAAG 4170 Query 4061 AAATCGAAAGCACTGGCCAGGTTTCCAAACAGCTGCAGTCCGACCTGGCAAAAGTGCAGG 4120 | ||| ||| ||| | || ||| || | || |||||||| | |||||||| Sbjct 4171 AGATCACCGCCACCGGCGAAGTGAGCAAGAAGATTCAAACCGACCTGCAGACAGTGCAGG 4230 Query 4121 AAGAACTGACCAAATCCGGTGCGCGTCTCTTCGATCTGGAACAGAAACTGGCTTCCGGTG 4180 | ||||||| | |||| | || | |||||||| || ||| || || ||| Sbjct 4231 ACGAACTGAAAACGGCCGGCTCCCGCTTGTTCGATCTCGAGTCGAAGCTTGCCGGCGGCA 4290 Query 4181 CT---GAAAATCCGGGTGAGAAGAAATCCTTCTCTGAACGTGCTGCGGAAGAGCTCATCA 4237 || || || || | | |||||||| ||| |||| || || || ||||| || | | Sbjct 4291 CTCTCGATAACCCTGAAGCCAAGAAATCGTTCGCTGAGCGGGCGGCCGAAGATCTGAAGA 4350 Query 4238 AGTCATGGGACGG---TAAACAGGGCACCTTCGACGCGAAGACGTTTAACAAGTCTCTCG 4294 || ||| |||| || |||| | |||| || | || | |||| |||||| Sbjct 4351 AGGGCTGGAACGGCTCTACGTCCGGCAAAGTGGACGTGATTAGCTTCAGCAAGGCTCTCG 4410 Query 4295 GCAGTGACGCTGATTCTGCTGGCTCACTGATCCAGCCGATGCAGATCCCCGGCATCATCA 4354 || | ||| | ||||||||| | || ||||||| ||||| ||||||||| ||| Sbjct 4411 GCGCAGGCGCCGCTTCTGCTGGTGCGTTGGTCCAGCCCCAGCAGAACCCCGGCATTCTCA 4470 Query 4355 TGCCAGGACTGCGCCGTCTGACCATTCGTGACCTGCTGGCGCAGGGCCGCATCTCCAGCA 4414 |||| || |||||||| |||||||| ||||||||||||||||| || |||| | | Sbjct 4471 TGCCCGGCCTGCGCCGGCTGACCATCCGTGACCTGCTGGCGCAAGGTCGCACGACTTCCG 4530 Query 4415 ACGCTCTGGAATACGTCCGTGAAGAGGTGTTTACCAATAACGCCGACGTGGTGGCCGAGA 4474 |||| | || ||||| || || | || || | ||| | ||||| ||| |||||| Sbjct 4531 ACGCCATCGAGTACGTGCGCGAGAACGTATTCATCAACAGCGCCGCTCCGGTCGCCGAGG 4590 Query 4475 AAGCGCTGAAGCCCGAATCGGATATCACCTTCAGTAAGCAAACCGCGAACGTGAAGACGA 4534 ||||||||||||| || | | ||||||| ||| |||| || ||||| |||||| Sbjct 4591 GCACGCTGAAGCCCGAGTCCAACCTGACCTTCACCAAGGAAACGGCCAACGTCAAGACGC 4650 Query 4535 TCGCCCACTGGGTGCAGGCATCGCGTCAGGTTATGGACGATGCGCCAATGCTGCAGTCAT 4594 | || |||||| | ||||| || || ||| | ||| || || || |||||| | || | Sbjct 4651 TGGCTCACTGGATTCAGGCTTCTCGCCAGATCATGTCTGACGCTCCGATGCTGGAATCCT 4710 Query 4595 ACGTCAACAACCGCCTCATGTACGGCCTGGCGCTGAAGGAGGAAGGTCAACTGCTGAACG 4654 | || ||| ||||| ||| || |||| || || ||||| || || || |||| Sbjct 4711 ATGTGAACGGTCGCCTGTTGTTTGGTCTGGACTTGGTCGAAGAAGGGCAGCTTCTCAACG 4770 Query 4655 GTGACGGTACCGGGGATAACATCGAAGGTTTGAACAAAGTGGCCACCGCTTACGACACCT 4714 | || || ||||| || ||| | || |||||||||| || ||||| |||||||| Sbjct 4771 GCGATGGCACCGGTGACAACCTGATCGGCCTGAACAAAGTCGCGACCGCCTACGACACTA 4830 Query 4715 CGCTGAATGCCACTGGCGACACCCGCGCTGACATTATCGCTCACGCTATTTATCAGGTGA 4774 |||| |||||||| |||||||| ||||||||| || || ||||| || | ||| | Sbjct 4831 CGCTCAATGCCACCGGCGACACTCGCGCTGACCAGATTGCACACGCGATCTTCCAGACCA 4890 Query 4775 CAGAGTCTGAGTTTAGCGCTTCCGGTATTGTCCTGAACCCGCGGGACTGGCACAACATCG 4834 || || ||||| ||||| || | || ||||||| || ||||||||| ||||| Sbjct 4891 GCGAATCCGAGTTCGAGGCTTCGGGCCTGATCTTGAACCCCCGCGACTGGCACGCCATCG 4950 Query 4835 CGCTGCTGAAAGACAATGAAGGCCGCTATATCTTCGGTGGTCCTCAGGCGTTTACCAGCA 4894 |||||||||||||| ||| || || || ||||| || || ||| |||||| || || Sbjct 4951 CGCTGCTGAAAGACGGTGATGGTCGTTACATCTTTGGCGGCCCTGCGGCGTTCGCCGCCA 5010 Query 4895 ACATCATGTGGGGCCTGCCAGTGGTTCCGACTAAGGCGCAGGCCGCCGGCACCTTTACGG 4954 | |||||||||| || || || ||| | || || || ||||| || || || || | Sbjct 5011 AGGTCATGTGGGGGCTTCCTGTTGTTGCCACCAAAGCCCAGGCACAGGGAACTTTCACTG 5070 Query 4955 TGGGCGGTTTCGATATGGCCTCTCAGGTCTGGGATCGCATGAATGCCACCGTGGAAGTCA 5014 | ||||| ||||| ||||| || ||| ||||||| |||||| | || || | || ||| Sbjct 5071 TTGGCGGCTTCGACATGGCTTCGCAGATCTGGGACCGCATGGACGCGACTATCGAGATCA 5130 Query 5015 GCCGTGACGACCGCGACAACTTCGTGAAAAACATGCTGACCATTCTGTGCGAAGAGCGCC 5074 || | || |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 5131 GCAACCAGGATCGCGACAACTTCGTGAAAAACATGCTGACCATCCTGTGCGAAGAGCGCC 5190 Query 5075 TGGCGCTGGCGCACTATCGCCCGGCGGCCATCATCAAGGGCACTTTC 5121 ||||| | | |||||||| || | || |||||||| ||| ||||| Sbjct 5191 TGGCGGTTACCCACTATCGTCCTACCGCAATCATCAAAGGCGCTTTC 5237 >seq3087926 Length=6391 Score = 131 bits (144), Expect = 4e-26 Identities = 324/484 (67%), Gaps = 12/484 (2%) Strand=Plus/Minus Query 12195 GATCCGTCGCTGGATGAATGCAACGGCACGCTGACGGCCTGCAAACTTCGGTTCGGTGAA 12254 |||||| | |||| | ||||| ||| ||| || ||||||| | || ||||| || Sbjct 5396 GATCCGGCCAAGGATCAGTGCAAGGGCTGCCTGTCGTCCTGCAAGTTGCGATTCGGCGAG 5337 Query 12255 AATAACGAGCTCTCGTTTGGTGGGTTCCCTGGCACGTCTTTGAT---CAGGAGCTGAT-A 12310 || ||||| || || ||||| || ||||| | | |||| | || | |||||||| | Sbjct 5336 AACAACGAACTGTCCTTTGGCGGATTCCCCGCCGTGTCTCTCATTGCCCGGAGCTGACCA 5277 Query 12311 TGCGGCAGAAAACCATTGATGCCATTATGGCGCATGCTGCAGCTGAATATCCTCGCGAGT 12370 |||| || | | ||||| ||||| ||||||||| || | || ||||| || |||| Sbjct 5276 TGCGCAAGCACATCATTGCGGCCATCCAGGCGCATGCGGCGACGGAGTATCCGCGAGAGT 5217 Query 12371 GCTGCGGCGTGGTGGCGCAGAAAAGCCGTGTTGAACGTTATTTCCCGTGCCGCAATCTTG 12430 |||||||| || || | |||| | | || ||||||||||| || | | Sbjct 5216 GCTGCGGCCTGCTGTTGGCCGTGGGCCGCGCGCAGAAGTACTTCCCGTGCCGGAACATAG 5157 Query 12431 CCACGGAACCGGAGGACAATTTTGTCCTCTGCCCGGAAGATTACGCAGCTGCTGAGGACT 12490 ||| ||| ||| | || | || || ||| || || ||||| || || || |||| Sbjct 5156 CCAAGGAGCCGAACGAAGAGTTCCGGCTTGACCCCGAGGACTACGCCGCGGCGGAAGACT 5097 Query 12491 GGGGCACGGTGATCGCCATCGCTCACAGTCACCCTGATGCCACGACACAGCCGAGCGAAC 12550 |||| |||||||| ||||| ||| ||||| || ||||| | ||| | | || Sbjct 5096 TGGGCGAGGTGATCGGCATCGTCCACTCGCACCCGGACGCCACCA-GCAG--GCCCTCAC 5040 Query 12551 TGGATAA---AGCGCAATGCGATGCAACGCTTTTACCCTGGCATATTGTGAGCTGGCCGG 12607 | || | || || || || ||| ||| || ||||| || || ||||| | Sbjct 5039 CGCATGACTTGGCCATGTGTGAGGCCACGGCTTTGCCATGGCACATCCTGTCTTGGCCCG 4980 Query 12608 AGGGTGATTTACGCACCATCCAGCC-GCGTGGAGAACTGCCGTTGCTGGAGCGTCCGTTT 12666 ||||||| | ||||| || ||| ||| | || || |||| |||| |||| ||||| Sbjct 4979 AGGGTGACTGGCGCACGATTACGCCGGCGGGTAGCAC-GCCGCTGCTCAAGCGCCCGTTC 4921 Query 12667 GTGC 12670 |||| Sbjct 4920 GTGC 4917 >seq3087822 Length=6084 Score = 114 bits (126), Expect = 3e-21 Identities = 228/336 (68%), Gaps = 4/336 (1%) Strand=Plus/Minus Query 12202 CGCTGGATGAATGCAACGGCACGCTGACGGCCTGCAAACTTCGGTTCGGTGAAAATAACG 12261 |||| || | ||||| ||| ||| || ||||||| | || ||||| ||||| |||| Sbjct 2105 CGCTTGACCAGTGCAAGGGCTGTCTGTCGTCCTGCAAGTTGCGCTTCGGCGAAAACAACG 2046 Query 12262 AGCTCTCGTTTGGTGGGTTCCCTGGCACGTCTTTGAT---CAGGAGCTGA-TATGCGGCA 12317 | || || || ||||| ||||| | | || |||| | |||||||| |||||| | Sbjct 2045 AACTGTCCTTCGGTGGATTCCCCGCCGTTTCCCTGATTGTCCGGAGCTGACTATGCGCAA 1986 Query 12318 GAAAACCATTGATGCCATTATGGCGCATGCTGCAGCTGAATATCCTCGCGAGTGCTGCGG 12377 | | | ||||| || ||| |||||| || || || |||||||| ||||| |||||||| Sbjct 1985 GCACATCATTGCCGCTATTCAGGCGCACGCGGCGGCGGAATATCCGCGCGAATGCTGCGG 1926 Query 12378 CGTGGTGGCGCAGAAAAGCCGTGTTGAACGTTATTTCCCGTGCCGCAATCTTGCCACGGA 12437 || || | |||| | | | || ||||||||||| || | |||||||| Sbjct 1925 GCTGCTGCTGGCCGTGGGCCGCGCTCAGAAGTACTTCCCGTGCCGGAACATCGCCACGGA 1866 Query 12438 ACCGGAGGACAATTTTGTCCTCTGCCCGGAAGATTACGCAGCTGCTGAGGACTGGGGCAC 12497 ||| || | || ||| || || | ||||| || || ||||||| |||| Sbjct 1865 GCCGAGCGAAGAGTTCAAGCTCGATCCCGAGGGCTACGCTGCGGCAGAGGACTTGGGCGA 1806 Query 12498 GGTGATCGCCATCGCTCACAGTCACCCTGATGCCAC 12533 |||||||| || | ||| ||||| || || || Sbjct 1805 GGTGATCGGTATAGTCCACTCACACCCGGACGCAAC 1770 >seq3088451 Length=13260 Score = 95.1 bits (104), Expect = 3e-15 Identities = 140/195 (72%), Gaps = 5/195 (3%) Strand=Plus/Plus Query 10823 AACGCCAAAGGCGGCGTTTATGACTCTCAATCCCTGAGTGCTTTCAGTAACGGGATCGTC 10882 ||||||||||||||||| || ||||||| | |||| |||||| ||| | | | Sbjct 8297 AACGCCAAAGGCGGCGTGTACGACTCTCCAAGCCTGTCGAGTTTCAGCAACCAGGTGCAC 8356 Query 10883 -AGAAACCCCACCATGTTCGCTTTCGCAAAAGGCGGGGCCGGAATCATGGGCGAGGCTGG 10941 | || || || |||||||||||||| || |||| || | || | | ||| || || Sbjct 8357 GACAAGCCGCAG-ATGTTCGCTTTCGCGAAGGGCGCGG---GGATATTCGCCGAAGCCGG 8412 Query 10942 ACCGGAGGCGATCATGCCGCTTACCCGCGCGCCGGATGGTTCTCTCGGCGTTCGTGCGGT 11001 || ||||||||||||||||||||| | || ||| || || || ||||| ||| | Sbjct 8413 GCCAGAGGCGATCATGCCGCTTACCAGGACGGCGGGCGGCGAGCTTGGGGTTCGGGCGTT 8472 Query 11002 CGGCGGCGGTAGCGG 11016 || |||||| |||| Sbjct 8473 GGGTGGCGGTGGCGG 8487 >seq3088057 Length=7030 Score = 93.3 bits (102), Expect = 1e-14 Identities = 209/313 (67%), Gaps = 12/313 (4%) Strand=Plus/Plus Query 15001 AATCCTGCGTGGATTTTTTACGACCTGGTTGTTT---CTGACCGGTTCGGCCTCGGTCAC 15057 || ||||||||| | ||||| |||||||| | || || | ||||||||| | Sbjct 5648 AACCCTGCGTGGGTGTTTTATGACCTGGTGCTGCACCCTTAC---TACGGCCTCGGCGAT 5704 Query 15058 CGTTTGACTGCTGCGAATATCGATAAATGGACGCTTTATCAGGTTGCTCAGTATTGTGAT 15117 || | ||| ||| | ||| ||| ||||||||| | || || || || ||| Sbjct 5705 CGCATCGATGCCACGATGGTTGATCGCTGGTCGCTTTATCGCATCGCGCAATACTGCGAT 5764 Query 15118 CAGATGGTACCAGACGGCAAAGGGGGCAACGGTACCGAACCACGTTATACCTGCAACGTG 15177 |||||||| || || || ||||| ||| | || || || | |||||||||| || Sbjct 5765 CAGATGGTGCCGGATGGAAAAGG------CGGCATGGAGCCGCGCTTTACCTGCAACCTG 5818 Query 15178 TACATTCAGGACCGGAACGACGCCTACACAGTCCTGCGTGATTTTGCCGCTATCTTCCGA 15237 ||| | || | | | ||| |||||| | || |||| ||| | || | ||||| | Sbjct 5819 TACCTGCAAAAGCAGGCCGAGGCCTACGCGGTGCTGCAGGATCTGGCATCGATCTTTCAC 5878 Query 15238 GGCATGACCTACTGGGGCGGGGATCAGATTGTGGCCCTGGCTGACATGCCGCGCGATGTT 15297 || || ||||||||| ||| ||||| |||| | || || |||||| ||||| Sbjct 5879 GGTCTGGCCTACTGGGACGGCAGCCAGATCGTGGTCAACGCCGATATGCCGGGCGATCCG 5938 Query 15298 GATTACAGCTACA 15310 | |||| ||||| Sbjct 5939 GTGTACACCTACA 5951 >seq3086781 Length=4259 Score = 82.4 bits (90), Expect = 2e-11 Identities = 57/65 (88%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 14792 GCTTCACCGAGGTGATTGACGCCAAACTACGTTACCCCAACACCGCGCTGCTCTACATCG 14851 |||||||||||||||| ||||| || | |||||||| |||||||| ||||||||||||| Sbjct 1892 GCTTCACCGAGGTGATCGACGCGAAGATCCGTTACCCGAACACCGCACTGCTCTACATCG 1833 Query 14852 AATTC 14856 | ||| Sbjct 1832 AGTTC 1828 >seq347631 Length=610 Score = 82.4 bits (90), Expect = 2e-11 Identities = 70/84 (83%), Gaps = 2/84 (2%) Strand=Plus/Minus Query 14773 GACACGATGACGCT-GCAGAGCTTCACCGAGGTGATTGACGCCAAACTACGTTACCCCAA 14831 ||||||||| | | || | ||||||| |||||||| |||||||| | |||||||| || Sbjct 521 GACACGATGCAGATTGCCG-GCTTCACAGAGGTGATCGACGCCAAGATCCGTTACCCGAA 463 Query 14832 CACCGCGCTGCTCTACATCGAATT 14855 ||||||| ||||||||||||| || Sbjct 462 CACCGCGTTGCTCTACATCGAGTT 439 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 123277719550762