Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09]
3,088,511 sequences; 2,785,377,831 total letters
Query= NC_019767.1
Length=40155
Score E
Sequences producing significant alignments: (Bits) Value
seq3088379 1083 0.0
seq3087926 145 2e-30
seq3087822 114 3e-21
seq3088057 96.9 9e-16
seq3088451 89.7 1e-13
seq2884985 87.8 4e-13
seq347631 80.6 7e-11
>seq3088379
Length=10556
Score = 1083 bits (1200), Expect = 0.0
Identities = 2152/3171 (68%), Gaps = 54/3171 (2%)
Strand=Plus/Plus
Query 1973 TCGACGACTTCATTTTCCGACCGCTGAGCATGTGATGGAAGAACCTAAATACACGATTGA 2032
||||||||||| | | | ||||| ||||||||| |||| ||| | | |||| || ||
Sbjct 2099 TCGACGACTTCCTCTCCAGACCGATGAGCATGTAATGGCAGATACCGACTACAGCATCGA 2158
Query 2033 CCTGCGAACCAATAACGGCTGGTGGGCAAGGCTGCAGTCCTGGTTTGTCGGCGGGCGTTT 2092
|||||| || | | ||||| | || | || ||||||||||| || |
Sbjct 2159 CCTGCGCACGCGCAGTCCATTCTGGGCGCGTATGGCGAGCTTCTTTGTCGGCGGCCGCCT 2218
Query 2093 AGTCACCCCAAATCAGGGCTCACAGACGGGGCCTGTTTCGGCCCACGGACACCTGGGCGA 2152
||||| || | | || |||||||| || || || || ||||| || |||| ||
Sbjct 2219 GGTCACACCTGAAAAAGGTTCACAGACAGGCCCAGTATCAGCCCAGGGTGTAGTGGGTGA 2278
Query 2153 TTCATCCATTAACGATGAACGGATACTGCAAATTTCGACTGTGTGGCGCT-GCGTGAGCC 2211
||| | | |||||||| || || || || |||| |||| |||| ||||| | |
Sbjct 2279 TTCGGTCGTAAACGATGAGCGCTCGCTCCAGATCGCGACCGTGTT-CGCTTGCGTGCGGC 2337
Query 2212 TGATTTCAACGCTCACGGCATGCTTACCGCTTGATGTCTTCGAAAC-AGACCAGAATGAC 2270
| || || | | || || ||| | || || || || ||| |||| | | ||| |||
Sbjct 2338 TTATCTCCAGCGTGACAGCTTGCATGCCACTGGACGTTTTCCAAACCAAAGGCGAA-GAC 2396
Query 2271 AACCGTAAAAAAGTGGATTTGAGCAATCCACTGGCGCGACTGCTGCGCTACTCACCGAAT 2330
| ||||| || | || || || ||||||||||| || ||| || ||
Sbjct 2397 AGG-GTAAAG--GTCGGGCTGGATAACCCGCTGGCGCGACTCCTTAAGTACCGCCCCAAC 2453
Query 2331 CAGTACATGACCGCCCAAGAATTCAGGGAGGCCATGACGATGCAGCTCTGTTTCTACGGT 2390
| | |||||| ||| || || | | ||||||||| |||||||| || | |||||
Sbjct 2454 GACTTCATGACTGCCTTTGATTTTCGTGTGGCCATGACTATGCAGCTTTGCTATTACGGC 2513
Query 2391 AACGCATATGCACTTGTGGACCGCAACAGCGCAGGTGACGTGATCAGCCTACTCCCGCTT 2450
|| || || || || | || ||||| | || || ||||| ||||| ||| | |||||
Sbjct 2514 AATGCCTACGCGCTGATTGAGCGCAATGGGGCTGGGGACGTAATCAGTCTAGTGCCGCTC 2573
Query 2451 CAGTCTGCCAATATGGATGTGAAACTCGTCGGaaaaaaaGTGGTTTATCGCTATCAACGC 2510
||||| || |||||||| | | || || | ||||| || |||| |||
Sbjct 2574 ATGTCTGTGAACATGGATGTTCGCTTGGAGGGTAAGCGGATCGTTTACCGATATCGCCGC 2633
Query 2511 GACAGCGAATACGCCGACTTTTCGCAGAAAGAGATTTTTCACCTTAAAGGCTTCGGATTC 2570
|||| | | ||||| || || ||| | || ||||||||||| || || || || ||
Sbjct 2634 GACACCAAGTACGCAGATTTCAAGCAAAGCGATATTTTTCACCTGAAGGGTTTTGGTTTT 2693
Query 2571 ACCGGGCTTGTAGGCCTGTCACCCATTGCTTTTGCCTGTAAATCGGCAGGTGTGGCAGTT 2630
| ||| || || ||||| || || |||||||| || || | || ||||| || |||
Sbjct 2694 AACGGCCTGGTTGGCCTTTCGCCGATTGCTTTCGCAGCGAAGACCGCCGGTGTAGCCGTT 2753
Query 2631 GCTATGGAGGACCAGCAGCGAGATTTCTTTGCCAACGGCGCCAAGTCTCCGCAAATCCTC 2690
|| ||||| || |||||||| || || | ||||||||| |||||||| |||||| | ||
Sbjct 2754 GCGATGGAAGATCAGCAGCGCGACTTTTATGCCAACGGTGCCAAGTCCCCGCAACTTCTT 2813
Query 2691 TCAACTGGCGA---AAAAGTGCTAACTGAACAGCAGCGCTCCCAGGTCGAAGAGAACTTC 2747
|| || || ||| || || | | | ||||| | || ||||| ||||| |||
Sbjct 2814 ATGACAGGGGATGGAAAGGTTCTCAACAAGGATCAGCGGGCGCAAGTCGAGGAGAATTTC 2873
Query 2748 AAAGAGATCGCCGGCGGCCCGGTaaaaaaaCGCCTCTGGATTCTGGAAGCGGGTTTTTCT 2807
|| ||||| ||||||| || || || || || |||||||| |||| | |||||| |
Sbjct 2874 AAGGAGATATCCGGCGGGCCAGTCAAGAAGCGTCTCTGGATCTTGGAGGGAGGTTTTACG 2933
Query 2808 ACATCGGCAATTGGCGTAACTCCGCAGGATGCCGAAATGATGGCGTCCCGAAAATTTCAG 2867
|| ||| || ||||| | ||||| || ||||| | ||||| || |||| || |||
Sbjct 2934 ACCCAGGCCATAGGCGTGAGCCCGCAAGACGCCGAGACAATGGCTGCCAGAAAGTTCCAG 2993
Query 2868 GTAAGTGAACTGGCGCGATTCTTTGGCGTACCGCCTCACCTTGTCGGCGACGTCGAGAAA 2927
|| ||||| |||||||| ||||| ||||| ||||| || || || |||||||| || ||
Sbjct 2994 GTGAGTGAGCTGGCGCGGTTCTTCGGCGTGCCGCCGCATCTGGTGGGCGACGTTGAAAAG 3053
Query 2928 TCAACGAGCTGGGGATCGGGCATCGAGCAGCAGAATCTCGGCTTCCTGCAGTACACCCTG 2987
||||| |||||||| || || |||||||| ||||| || ||||| || |||||| | ||
Sbjct 3054 TCAACCAGCTGGGGGTCAGGTATCGAGCAACAGAACCTGGGCTTTCTCCAGTACGCGCTC 3113
Query 2988 CAGCCCTATATCTCCAGGTGGGAAAACAGCATTCAGCGGTGGCTTATTCCTGCTAAGGAT 3047
| || || | | ||||| | |||||| ||| |||||| | | | ||
Sbjct 3114 GACCCTTACCTTGAAATTTGGGAGGGCTGCATTCTGCGATGGCTTGTAAAGCCGAGCGAC 3173
Query 3048 GTTGGCCGCATTCATGCTGAGCACAACCTCGACGGCCTGCTGAGGGGCGATTCGGCATCC 3107
| || | |||||||||||||||| ||||| ||||||| || || || | ||
Sbjct 3174 CTCGGGGTGTTCCATGCTGAGCACAACCGAGACGGGTTGCTGAGTGGTGACTCAACCGCC 3233
Query 3108 CGCGCTGCCTTTATGAAGGCAATGGGAGAGGCAGGGCTACGCACCATCAACGAGATGCGA 3167
||||| | | || | || || | ||||| | || ||||||| ||
Sbjct 3234 CGCGCGAATTACCTAAAAACGTTGATTGATACCGGGCTGCTGACTCCCAACGAGGGCCGG 3293
Query 3168 CGAACGGACAACCTCCCGCCATTGCCGGGTGGCGATGTGGCAATGCGCCAGTCGCAATAC 3227
||| ||| ||| |||| || ||||| || || | ||||| |||||| ||
Sbjct 3294 CGAGTCAGCAATAGGCCGAAGCTGCCCGGCGGCGACGTCGCCACACGCCAATCGCAAAAC 3353
Query 3228 GTGCCGATC-ACCGATTTAGGAACCAACAAAGAGCCCCGTAA-TAACGGGGCTTAATTTT 3285
|||||| | | | | || | | ||||| ||||| | ||||| ||| ||||
Sbjct 3354 GTGCCGCTTGATCAACTTGGTCA-----AAAGAACCCCGCCCCTGGCGGGGTTTAGTTTT 3408
Query 3286 TATGGGGGC-CGTAATGCCTGAAATCGTAAAAACGCTGTCCTTCGACGAGACAGAAATCA 3344
| ||| | | |||| | | || ||| || || | ||| |||||| ||||||
Sbjct 3409 TCTGGAGCTACCCAATGGCAAATATTCAAAAGACCTTGGCGTTCACCGAGACTCAAATCA 3468
Query 3345 AATTCACCGGTGACGGTAAACAGGGGATTTTTGAAGGCTACGCCTCTGTTTTTAATAACA 3404
| ||| || || || || || | || || || |||||| |||||| | ||
Sbjct 3469 AGTTCTCCTCGGATGGCAAGGTTGGTGTGTTCGAGGGGTACGCCAGTGTTTTCGACGTCA 3528
Query 3405 CCGATTCCGATGGCGACATCATTCTGCCCGGGGCGTTTAAAAACGCGCTGGCGAACCAGA 3464
||| || || ||||||||||| |||||||| || || || || || || | || |
Sbjct 3529 TCGACTCAGACGGCGACATCATCCTGCCCGGCGCCTTCAAGAAGGCTTTGTCTTCGCAAA 3588
Query 3465 CCCGAAAAGTGGCGATGTTTTTTAACCACAGGACGTGGGAACTGCCGGTTGGCAAATGGG 3524
||| |||| | |||||||||||||| ||| | | ||||| ||||| || |||
Sbjct 3589 GCCGCCAAGTCGGCATGTTTTTTAACCATCAGACCTACGGCCTGCCTGTTGGAAAGTGGC 3648
Query 3525 ACAGCCTGGCTGAAGACGAAAAAGGCCTGTATGTGCGCGGTCAACTTACCCCAGGACACA 3584
| ||||| || ||| ||||| || | || | || | || || || ||
Sbjct 3649 AGTCGCTGGCGGAGGACAGCAAAGGACTCTTCGTTGGAGGCGAGCTGACGCCCGGTTTGT 3708
Query 3585 GCGGCGCCGCTGACCTGAAAGCGGCAATGCAGCACGGTACGGTTGAAGGTATGTCGGTTG 3644
| | || ||||| || || ||| | || || || || ||| |||||||||
Sbjct 3709 CGGTCTCCAACGACCTCCGGGCAGCCATGGAACATAAGACCGTCGAGGGTTTGTCGGTTG 3768
Query 3645 GCTTTTCCGTTTCGAAAGACGATTACACCATCATTCCAACAGGCCGCATTTTTAAGAATA 3704
|||| |||| || ||||||||| || |||| || |||||| || | |||
Sbjct 3769 GCTTCACCGTCCTCAAGGACGATTACGCCGTCATCGATACCGGCCGCGCATTCAGCAATG 3828
Query 3705 TCCAGGCTCTGCGCGAAATCAGCGTCTGCACTTTCCCCGCCAACGAACAGGCTGGCATCG 3764
||||||| ||||| || |||||| | ||||| || || ||||| || ||||| ||| |
Sbjct 3829 TCCAGGCCCTGCGAGAGATCAGCATTTGCACCTTTCCTGCCAATGAGCAGGCGACCATTG 3888
Query 3765 CAGCCATGAAAAGTGTCGATGGCATTGAA----ACGATTCGTGATGTGGAGAACTGGCTG 3820
||||||||||| |||| || || || ||||| ||||| ||| | ||||||
Sbjct 3889 ACGCCATGAAAAGC----ATGGAATCGATCAGCACCATTCGCGATGTAGAGCATTGGCTG 3944
Query 3821 AGGGATTCAGTCGGCCTCACCAAATCACAGGCAGTTGGGCTAATTGCCCGGTTTAAGTCA 3880
|||||||| | ||| || | || || || || | || || || |||||| | |||||
Sbjct 3945 AGGGATTCGGCCGGTCTTTCGAAGTCGCAAGCCCTGGGCCTGATAGCCCGGATCAAGTCC 4004
Query 3881 GCGATTCGGAGCGAGTCCGAGGGCGACGGAAACGAAGCACAAATAAACGCTCTGCTTCAG 3940
|| ||||||| || ||||| || | || |||| | ||| | || |
Sbjct 4005 GCAGTTCGGAGTGATTCCGAAGGTGGCG------------AAATCACCGCGATCCTGGAT 4052
Query 3941 AGCATCAAATCTTTCCCTTCTAACTTAGGTAAATAATT-ATGTCTGAACTCGCTCTCATT 3999
||||||| || ||||| ||| |||| || ||| ||||| ||| | || | |||
Sbjct 4053 CGCATCAAGTCATTCCCATCTG---TAGGAAATTAAACCATGTCCGAATTGGCCCAAATT 4109
Query 4000 CAAAAAGCTATCGAAGAATCCCAGCAGAAAATGACCCAGCTTTTCGATGCGCAGAAAGCA 4059
||||| || |||||| | || ||| ||||| |||| ||||| ||||| || |
Sbjct 4110 CAAAAGGCAATCGAAACCGCGCAAACGAACATGACTGAGCTGTTCGAGGCGCAAAAGAAA 4169
Query 4060 GAAATCGAAAGCACAGGCCAGGTTTCCAAACAGTTGCAGTCCGACCTGATGAAAGTACAG 4119
|| ||| ||| ||| | || ||| || | || |||||||| || ||| |||
Sbjct 4170 GAGATCACCGCCACCGGCGAAGTGAGCAAGAAGATTCAAACCGACCTGCAGACAGTGCAG 4229
Query 4120 GAAGAGCTGACCAAATCCGGCACTCGCCTCTTCGATCTGGAACAGAAACTGGCATCCGGC 4179
|| || |||| | ||||| | ||| | |||||||| || ||| || || ||||
Sbjct 4230 GACGAACTGAAAACGGCCGGCTCCCGCTTGTTCGATCTCGAGTCGAAGCTTGCCGGCGGC 4289
Query 4180 GCT---GAGAATCCTGGTGAGAAGAAATCCTTCTCTGAACGGGCTGCTGAAGAGCTTATT 4236
|| || || |||| | |||||||| ||| |||| ||||| || ||||| || |
Sbjct 4290 ACTCTCGATAACCCTGAAGCCAAGAAATCGTTCGCTGAGCGGGCGGCCGAAGATCTGAAG 4349
Query 4237 AAGTCATGGGACGG---TAAACAGGGCACCTTTGGCGCTAAAACGTTTAACAAGTCACTA 4293
||| ||| |||| || |||| | | || | | || | |||| | ||
Sbjct 4350 AAGGGCTGGAACGGCTCTACGTCCGGCAAAGTGGACGTGATTAGCTTCAGCAAGGCTCTC 4409
Query 4294 GGCAGTGACGCTGATTCGGCTGGCTCACTGATCCAGCCTATGCAGATCCCAGGCATCATC 4353
||| | ||| | ||| ||||| | || ||||||| ||||| ||| ||||| ||
Sbjct 4410 GGCGCAGGCGCCGCTTCTGCTGGTGCGTTGGTCCAGCCCCAGCAGAACCCCGGCATTCTC 4469
Query 4354 ATGCCAGGCCTGCGCCGTCTTACCATTCGTGATCTGCTGGCTCAGGGCCGC---ACTTCC 4410
||||| ||||||||||| || ||||| ||||| |||||||| || || ||| ||||||
Sbjct 4470 ATGCCCGGCCTGCGCCGGCTGACCATCCGTGACCTGCTGGCGCAAGGTCGCACGACTTCC 4529
Query 4411 AGTAACGCTCTGGAATATGTGCGTGAAGAGGTGTTTACCAATAACGCCGACGTGGTGGCA 4470
|||| | || || ||||| || | || || | ||| | ||||| ||| ||
Sbjct 4530 ---GACGCCATCGAGTACGTGCGCGAGAACGTATTCATCAACAGCGCCGCTCCGGTCGCC 4586
Query 4471 GAGAAAGCACTGAAGCCAGAATCGGATATCACCTTCAGCAAACAAACCGCGAACGTGAAG 4530
||| | |||||||| || || | | ||||||| ||| |||| || ||||| |||
Sbjct 4587 GAGGGCACGCTGAAGCCCGAGTCCAACCTGACCTTCACCAAGGAAACGGCCAACGTCAAG 4646
Query 4531 ACCATCGCGCACTGGGTGCAGGCATCACGTCAGGTGATGGATGATGCGCCAATGCTTCAG 4590
|| | || |||||| | ||||| || || ||| | ||| ||| || || ||||| |
Sbjct 4647 ACGCTGGCTCACTGGATTCAGGCTTCTCGCCAGATCATGTCTGACGCTCCGATGCTGGAA 4706
Query 4591 TCCTACATTAACAACCGCCTCATGTACGGCCTGGCACTGAAGGAAGAGGGCCAGCTGCTG 4650
||||| | ||| ||||| ||| || |||| || ||||| || ||||| ||
Sbjct 4707 TCCTATGTGAACGGTCGCCTGTTGTTTGGTCTGGACTTGGTCGAAGAAGGGCAGCTTCTC 4766
Query 4651 AACGGCGACGGTACCGGGGATAACCTGGAAGGGCTGAACAAAGTGGCAACCGCCTATGAC 4710
|||||||| || ||||| || |||||| || ||||||||||| || |||||||| |||
Sbjct 4767 AACGGCGATGGCACCGGTGACAACCTGATCGGCCTGAACAAAGTCGCGACCGCCTACGAC 4826
Query 4711 ACCTCGCTGAATGCCACCGGCGACACCCGCGCTGACATTATCGCTCACGCTATTTATCAG 4770
|| |||| ||||||||||||||||| ||||||||| || || ||||| || | |||
Sbjct 4827 ACTACGCTCAATGCCACCGGCGACACTCGCGCTGACCAGATTGCACACGCGATCTTCCAG 4886
Query 4771 GTGACCGAGTCTGAGTTCAGCGCTTCCGGTATCGTCCTGAACCCGCGCGACTGGCACAAC 4830
| ||| || |||||| ||||| || | || ||||||| |||||||||||| |
Sbjct 4887 ACCAGCGAATCCGAGTTCGAGGCTTCGGGCCTGATCTTGAACCCCCGCGACTGGCACGCC 4946
Query 4831 ATCGCGTTGCTGAAAGACAATGAAGGCCGCTATATCTTCGGTGGTCCTCAGGCATTCACC 4890
|||||| ||||||||||| ||| || || || ||||| || || ||| ||| ||| ||
Sbjct 4947 ATCGCGCTGCTGAAAGACGGTGATGGTCGTTACATCTTTGGCGGCCCTGCGGCGTTCGCC 5006
Query 4891 AGTAACATCATGTGGGGCTTGCCAGTGGTTCCGACTAAGGCGCAGGCCGCCGGCACCTTT 4950
|| |||||||||| | || || ||| | || || || ||||| || || ||
Sbjct 5007 GCCAAGGTCATGTGGGGGCTTCCTGTTGTTGCCACCAAAGCCCAGGCACAGGGAACTTTC 5066
Query 4951 ACCGTAGGCGGTTTCGATATGGCCTCACAGGTCTGGGATCGCATGGATGCCACCGTGGAA 5010
|| || ||||| ||||| ||||| || ||| ||||||| |||||||| || || | ||
Sbjct 5067 ACTGTTGGCGGCTTCGACATGGCTTCGCAGATCTGGGACCGCATGGACGCGACTATCGAG 5126
Query 5011 GTTAGCCGTGAAGACCGCGATAACTTCGTGAAAAACATGCTGACCATCCTGTGCGAAGAG 5070
| ||| | || ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 5127 ATCAGCAACCAGGATCGCGACAACTTCGTGAAAAACATGCTGACCATCCTGTGCGAAGAG 5186
Query 5071 CGTCTGGCGCTGGCGCATTATCGCCCGACAGCAATCATCAAGGGCACCTTC 5121
|| |||||| | | || ||||| || || ||||||||||| ||| | |||
Sbjct 5187 CGCCTGGCGGTTACCCACTATCGTCCTACCGCAATCATCAAAGGCGCTTTC 5237
>seq3087926
Length=6391
Score = 145 bits (160), Expect = 2e-30
Identities = 327/484 (68%), Gaps = 12/484 (2%)
Strand=Plus/Minus
Query 12625 GATCCGTCGCTGGATGAATGCAATGGCACGCTGACGGCCTGCAAACTCCGATTCGGCGAA 12684
|||||| | |||| | ||||| ||| ||| || ||||||| | |||||||||||
Sbjct 5396 GATCCGGCCAAGGATCAGTGCAAGGGCTGCCTGTCGTCCTGCAAGTTGCGATTCGGCGAG 5337
Query 12685 AATAACGAACTCTCGTTTGGTGGCTTCCCGGGCACGTCTTTGAT---CAGGAGTTGAT-A 12740
|| |||||||| || ||||| || ||||| | | |||| | || | |||| ||| |
Sbjct 5336 AACAACGAACTGTCCTTTGGCGGATTCCCCGCCGTGTCTCTCATTGCCCGGAGCTGACCA 5277
Query 12741 TGCGTCAGAAAACCATAGATGCGATTATGGCGCATGCTGCAGCTGAATATCCTCTTGAGT 12800
|||| || | | ||| | || || ||||||||| || | || ||||| | ||||
Sbjct 5276 TGCGCAAGCACATCATTGCGGCCATCCAGGCGCATGCGGCGACGGAGTATCCGCGAGAGT 5217
Query 12801 GTTGCGGCGTGGTGGCGCAGAAAAGCCGCGTTGAACGTTATTTCCCGTGCCGGAATCTTG 12860
| |||||| || || | |||||| | || |||||||||||||| | |
Sbjct 5216 GCTGCGGCCTGCTGTTGGCCGTGGGCCGCGCGCAGAAGTACTTCCCGTGCCGGAACATAG 5157
Query 12861 CCGCGGCGCCGGAGGACAATTTTGTCCTTTGCCCCGAAGACTACGCAGCTGCTGAGGACT 12920
|| || |||| | || | || ||| |||||| |||||||| || || || ||||
Sbjct 5156 CCAAGGAGCCGAACGAAGAGTTCCGGCTTGACCCCGAGGACTACGCCGCGGCGGAAGACT 5097
Query 12921 GGGGAACGGTGATCGCCATCGTTCACAGTCACCCTGACGCCACAACGCAGCCGAGCGAAC 12980
||| |||||||| |||||| ||| ||||| |||||||| | |||| | | ||
Sbjct 5096 TGGGCGAGGTGATCGGCATCGTCCACTCGCACCCGGACGCCACCA-GCAG--GCCCTCAC 5040
Query 12981 TGGATAA---AGCGCAATGCGACGCAACGCTTTTACCCTGGCATATTGTGAGCTGGCCGG 13037
| || | || || || || ||| ||| || ||||| || || ||||| |
Sbjct 5039 CGCATGACTTGGCCATGTGTGAGGCCACGGCTTTGCCATGGCACATCCTGTCTTGGCCCG 4980
Query 13038 AGGGGGATTTACGCACCATCCAGCC-GCGCGGAGAACTGCCACTGCTGGAGCGTCCGTTT 13096
|||| || | ||||| || ||| ||| | || || ||| ||||| |||| |||||
Sbjct 4979 AGGGTGACTGGCGCACGATTACGCCGGCGGGTAGCAC-GCCGCTGCTCAAGCGCCCGTTC 4921
Query 13097 GTGC 13100
||||
Sbjct 4920 GTGC 4917
>seq3087822
Length=6084
Score = 114 bits (126), Expect = 3e-21
Identities = 315/475 (66%), Gaps = 12/475 (3%)
Strand=Plus/Minus
Query 12632 CGCTGGATGAATGCAATGGCACGCTGACGGCCTGCAAACTCCGATTCGGCGAAAATAACG 12691
|||| || | ||||| ||| ||| || ||||||| | || ||||||||||| ||||
Sbjct 2105 CGCTTGACCAGTGCAAGGGCTGTCTGTCGTCCTGCAAGTTGCGCTTCGGCGAAAACAACG 2046
Query 12692 AACTCTCGTTTGGTGGCTTCCCGGGCACGTCTTTGA---TCAGGAGTTGA-TATGCGTCA 12747
|||| || || ||||| ||||| | | || ||| || |||| ||| |||||| |
Sbjct 2045 AACTGTCCTTCGGTGGATTCCCCGCCGTTTCCCTGATTGTCCGGAGCTGACTATGCGCAA 1986
Query 12748 GAAAACCATAGATGCGATTATGGCGCATGCTGCAGCTGAATATCCTCTTGAGTGTTGCGG 12807
| | | ||| | || ||| |||||| || || || |||||||| | || || |||||
Sbjct 1985 GCACATCATTGCCGCTATTCAGGCGCACGCGGCGGCGGAATATCCGCGCGAATGCTGCGG 1926
Query 12808 CGTGGTGGCGCAGAAAAGCCGCGTTGAACGTTATTTCCCGTGCCGGAATCTTGCCGCGGC 12867
|| || | |||||| | | || |||||||||||||| | ||| |||
Sbjct 1925 GCTGCTGCTGGCCGTGGGCCGCGCTCAGAAGTACTTCCCGTGCCGGAACATCGCCACGGA 1866
Query 12868 GCCGGAGGACAATTTTGTCCTTTGCCCCGAAGACTACGCAGCTGCTGAGGACTGGGGAAC 12927
|||| || | || || ||||| | |||||| || || ||||||| |||
Sbjct 1865 GCCGAGCGAAGAGTTCAAGCTCGATCCCGAGGGCTACGCTGCGGCAGAGGACTTGGGCGA 1806
Query 12928 GGTGATCGCCATCGTTCACAGTCACCCTGACGCCACAACGCAGCC---GAGCGAACTGGA 12984
|||||||| || || ||| ||||| ||||| || | || ||| | || || ||
Sbjct 1805 GGTGATCGGTATAGTCCACTCACACCCGGACGCAACCA-GCCGCCCATCACCGCAC--GA 1749
Query 12985 TAAAGCGCAATGCGACGCAACGCTTTTACCCTGGCATATTGTGAGCTGGCCGGAGGGGGA 13044
|| || || || ||| | |||||||||||| | ||||| ||||| ||
Sbjct 1748 CCTTGCCATGTGTGAGGCCACGGCCGTGCCCTGGCATATTCTCTCGTGGCCCGAGGGCGA 1689
Query 13045 TTTACGCACCATCCAGCC-GCGCGGAGAACTGCCACTGCTGGAGCGTCCGTTTGT 13098
| ||||| ||| ||| || | | || ||| ||||| |||| ||||| ||
Sbjct 1688 CATGCGCACGATCACGCCAACGGGCACCAC-GCCGCTGCTCAAGCGGCCGTTCGT 1635
>seq3088057
Length=7030
Score = 96.9 bits (106), Expect = 9e-16
Identities = 200/297 (67%), Gaps = 12/297 (4%)
Strand=Plus/Plus
Query 15273 AACCCTGCGTGGATTTTTTACGACCTGGTTGTTT---CTGACCGGTTCGGCCTTGGGCAC 15329
|||||||||||| | ||||| |||||||| | || || | |||||| || |
Sbjct 5648 AACCCTGCGTGGGTGTTTTATGACCTGGTGCTGCACCCTTAC---TACGGCCTCGGCGAT 5704
Query 15330 CGTTTGACCGCTGCGAATATTGATAAATGGACGCTTTATCAGGTTGCTCAGTATTGTGAT 15389
|| | || ||| ||||| ||| ||||||||| | || || || || |||
Sbjct 5705 CGCATCGATGCCACGATGGTTGATCGCTGGTCGCTTTATCGCATCGCGCAATACTGCGAT 5764
Query 15390 CAGATGGTGCCAGACGGCAAAGGGGGCAACGGTACAGAACCACGTTATACCTGCAACGTG 15449
||||||||||| || || ||||| ||| | || || || | |||||||||| ||
Sbjct 5765 CAGATGGTGCCGGATGGAAAAGG------CGGCATGGAGCCGCGCTTTACCTGCAACCTG 5818
Query 15450 TACATCCAGGATCGGAACGACGCCTACACAGTCCTGCGTGATTTTGCCGCTATCTTCCGT 15509
||| | || | | | ||| |||||| | || |||| ||| | || | ||||| |
Sbjct 5819 TACCTGCAAAAGCAGGCCGAGGCCTACGCGGTGCTGCAGGATCTGGCATCGATCTTTCAC 5878
Query 15510 GGCATGACCTACTGGGGCGGGGATCAGATTGTGGCCCTGGCTGACATGCCGCGCGAT 15566
|| || ||||||||| ||| ||||| |||| | || || |||||| |||||
Sbjct 5879 GGTCTGGCCTACTGGGACGGCAGCCAGATCGTGGTCAACGCCGATATGCCGGGCGAT 5935
>seq3088451
Length=13260
Score = 89.7 bits (98), Expect = 1e-13
Identities = 194/287 (68%), Gaps = 10/287 (3%)
Strand=Plus/Plus
Query 12839 TATTTCCCGTGCCGGAATCTTGCCGCGGCGCCGGAGGACAATTTTGTCCTTTGCCCCGAA 12898
||||||||||||||||| ||||| ||| ||| | || | || || ||||||
Sbjct 9892 TATTTCCCGTGCCGGAACATTGCCACGGAGCCAAACGAAGAGTTCCGGCTCGACCCCGAG 9951
Query 12899 GACTACGCAGCTGCTGAGGACTGGGGAACGGTGATCGCCATCGTTCACAGTCACCCTGAC 12958
|||||||| || || || ||| ||| |||||| | |||||| ||| || || |||
Sbjct 9952 GACTACGCCGCGGCGGAAGACCAGGGCCAGGTGATTGGCATCGTCCACTCGCATCCGGAC 10011
Query 12959 GCCACAACGCA-GCCG----AGCGAACTGGATAAAGCGCAATGCGACGCAACGCTTTTAC 13013
|| || | ||| |||| |||| || ||| || || || ||| ||| |
Sbjct 10012 GCAACCA-GCAGGCCGTCGTCGCGA----GACCTGGCGATGTGTGAGGCCACGACTTTGC 10066
Query 13014 CCTGGCATATTGTGAGCTGGCCGGAGGGGGATTTACGCACCATCCAGCCGCGCGGAGAAC 13073
||||||| ||| || |||||| ||||| || | ||||| ||| || ||| |
Sbjct 10067 CCTGGCACATTCTGTCCTGGCCCGAGGGCGACCTGCGCACGATCACTCCAACCGGCAACA 10126
Query 13074 TGCCACTGCTGGAGCGTCCGTTTGTGCTTGGACACTTCGACTGCTGG 13120
||| |||||| ||| || ||||||| |||| | |||||||||
Sbjct 10127 CGCCGCTGCTGAGGCGCCCATTTGTGCATGGAGCATGGGACTGCTGG 10173
Score = 84.2 bits (92), Expect = 5e-12
Identities = 67/81 (83%), Gaps = 0/81 (0%)
Strand=Plus/Plus
Query 15064 GCTTCACCGAGGTGATTGACGCCAAACTGCGCTACCCGAACACCGCGCTGCTCTACGTCG 15123
||| |||| ||||||| ||||| || ||||||||||| |||||||||||||| | |||||
Sbjct 11818 GCTACACCCAGGTGATCGACGCAAAGCTGCGCTACCCAAACACCGCGCTGCTGTTCGTCG 11877
Query 15124 AATTCGACTCAAGCCAGTTCA 15144
| |||||| | |||||||
Sbjct 11878 AGTTCGACGCCGAGCAGTTCA 11898
>seq2884985
Length=308
Score = 87.8 bits (96), Expect = 4e-13
Identities = 167/244 (68%), Gaps = 14/244 (6%)
Strand=Plus/Minus
Query 17507 CGCGGGGATGGGTATCGGCGTGGAGAATACGCCATCCGGCATGCAGTCGCAGGTTATCTT 17566
|||||| || || | || ||||||| | | |||| ||||||||||| | ||| |
Sbjct 291 CGCGGGTATCGGGCTTGGGTTGGAGAACGGGTCGGGCGGCCTGCAGTCGCAGTTCATCAT 232
Query 17567 CCTGGCTGATCGCTTCGCCGTCACCACGGCA-GCCGGAAATAGCGTGGCTTTGCCGTTTG 17625
| || || || |||||| || |||| ||||| | |||| || ||||
Sbjct 231 CGACGCCGACCGGTTCGCCATCG----GGCAAGCCGGCAT---CGTG------CCCTTTG 185
Query 17626 TGATCCAGAATGGACAGACATTCATCCGGGCCAGTTTCATCCAGGACGGCACTATCAGCA 17685
| | ||| ||| ||||| ||||| | |||||||||||||||||| |||| ||
Sbjct 184 CGGTACAGGGTGGGCAGACTTTCATTAAATCGGCTTTCATCCAGGACGGCACGATCACCA 125
Query 17686 ACGCAAAGATTGGTAATTTTATCCAGTCGAACAATTATGTTGCTGGTTCTGCTGGCTGGA 17745
|||| ||||| || || | |||||||| || || || | | ||| ||||||||||
Sbjct 124 ACGCCAAGATCGGCAACTACATCCAGTCCAATAACTACGACCCAGGTAAGGCTGGCTGGA 65
Query 17746 AGCT 17749
||||
Sbjct 64 AGCT 61
>seq347631
Length=610
Score = 80.6 bits (88), Expect = 7e-11
Identities = 75/93 (81%), Gaps = 2/93 (2%)
Strand=Plus/Minus
Query 15036 AAGATCGGCGACACGATGATGCT-GCAGAGCTTCACCGAGGTGATTGACGCCAAACTGCG 15094
|| ||| |||||||||| | | || | ||||||| |||||||| |||||||| | ||
Sbjct 530 AAAATCTCCGACACGATGCAGATTGCCG-GCTTCACAGAGGTGATCGACGCCAAGATCCG 472
Query 15095 CTACCCGAACACCGCGCTGCTCTACGTCGAATT 15127
||||||||||||||| |||||||| |||| ||
Sbjct 471 TTACCCGAACACCGCGTTGCTCTACATCGAGTT 439
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 123666131760094
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |