Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09]
3,088,511 sequences; 2,785,377,831 total letters
Query= NC_019929.1
Length=243050
Score E
Sequences producing significant alignments: (Bits) Value
seq3079416 86.0 9e-12
>seq3079416
Length=2120
Score = 86.0 bits (94), Expect = 9e-12
Identities = 198/296 (67%), Gaps = 2/296 (1%)
Strand=Plus/Minus
Query 122362 CATGAAACAATATCTGGACTTACTGCGTGACGTTCGTGACAACGGGCACGAAAAAGCA-G 122420
|||||| ||||| || || | |||| ||||| |||||| | ||| || ||| |
Sbjct 1448 CATGAAGCAATACCTCGAACTCCTGCACGACGT-CGTGACCAATGGCCTGACCAAGGGCG 1390
Query 122421 ACCGTACGGGCACGGGCACCCTGTCGTTATTCGGCGCACAAATGCGCTTTGACCTGCAAA 122480
| ||||| ||||| ||||||| | | | |||| | || || |||||
Sbjct 1389 ATCGTACCGGCACCGGCACCCGGGCCGTGTTCGCCCGCCAGTATCGGCACAACCTGGCCG 1330
Query 122481 AAGGTTTCCCGCTGGTCACGACCAAAAAGGTTCACCTCCGCTCCATCATCCATGAGCTTC 122540
| || ||||||||| | || ||||| || | ||| || |||| | | |||||
Sbjct 1329 ACGGCTTCCCGCTGCTGACCACCAAGAAACTGCACTTCAAAAGCATCGCCAACGAGCTGA 1270
Query 122541 TGTGGTTCCTCATGGGCGATACCAACATCCAGTATCTGAAAGACAACAACGTCAGTATCT 122600
| ||| | | | ||| | ||||| ||| ||| || || || ||| ||| | ||||
Sbjct 1269 TCTGGATGTTGAGCGGCAACACCAATATCAAGTGGCTTAACGAAAACGGCGTGCGCATCT 1210
Query 122601 GGGATGAATGGGCAGATGAAGATGGTAATCTCGGCCCGGTGTACGGTAAGCAATGG 122656
||||||||||||| ||||| || | || |||||||||||||| |||| |||
Sbjct 1209 GGGATGAATGGGCCACCGAAGACGGCGACCTGGGCCCGGTGTACGGCGAGCAGTGG 1154
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 747610437675600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |