Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09]
3,088,511 sequences; 2,785,377,831 total letters
Query= NC_020844.1
Length=40695
Score E
Sequences producing significant alignments: (Bits) Value
seq3086203 149 2e-31
>seq3086203
Length=3793
Score = 149 bits (164), Expect = 2e-31
Identities = 171/230 (74%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 2386 GCAGTCTCTTTACTCGCCTCATGGTCGTAGTAATACTTGGGCGACTTGGACAGCAGGAAG 2445
|||| || || |||| || |||||||||||||| || |||||| ||| || ||
Sbjct 1239 GCAGGTTCCTTGATCGCATCCTGGTCGTAGTAATAACGTGGTGACTTGCTCAGGAGAAAC 1298
Query 2446 ATGTACTCGTGCGCCTTTGTGCAGCGGTCGCGCACGCTCTCCGGCATTGGGTTTGGCTTG 2505
| |||||| |||| ||||||||| ||||| | || ||||| ||||| || ||
Sbjct 1299 AGGTACTCATGCGACTTTGTGCACCGGTCCTTGGTGGATTCAGGCATGGGGTTCGGTTTA 1358
Query 2506 TGCCAGATAATATCCTGACGCAGGTACCAGCCGTCGGCTTGCAGGGCGAACGCTACGCGC 2565
|||||||| || |||||||||||||||||||| || |||| |||||||| || | |||
Sbjct 1359 TGCCAGATGATGTCCTGACGCAGGTACCAGCCATCATCTTGAAGGGCGAAGGCGAGTCGC 1418
Query 2566 CAGGGGATGCCGATAAGGTCTTTTGCTTTCAATCCGTTAGGTGCAGATCG 2615
||||| | ||| || ||||||||| |||| || | |||| || |||
Sbjct 1419 CAGGGCACGCCCATCAGGTCTTTTTGCTTCAGACCCGTCGGTGGAGCTCG 1468
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 125330755514374
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |