Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09]
3,088,511 sequences; 2,785,377,831 total letters
Query= NC_020850.1
Length=38374
Score E
Sequences producing significant alignments: (Bits) Value
seq3088211 95.1 3e-15
>seq3088211
Length=8104
Score = 95.1 bits (104), Expect = 3e-15
Identities = 156/225 (69%), Gaps = 0/225 (0%)
Strand=Plus/Plus
Query 30888 AATATGAAAAAGCTCGTGCTCTACCAGTGAGCAAAATTCAACATTTGAGCAATGATTGCA 30947
||| ||| | ||||| ||||| |||||| |||| || |||| ||| || |||
Sbjct 1360 AATGTGATAGAGCTCATGCTCAACCAGTCGCAAAAAATCTACATCGCTGCATTGGGCGCA 1419
Query 30948 GTATTCGGCGGATAGGGTAATTATAAACTTCGGAACGTAGCCAAACCATTCAAACACTTG 31007
||| || |||| | ||| || || || ||| || | ||||||||||||| || ||
Sbjct 1420 GTAGTCAGCGGCCAAGGTGATGATGAAGGCCGGCACATCGCCAAACCATTCACGCATCTG 1479
Query 31008 TTGTTCCATTCTGGCTTTTTTCCATCCACCAGCCATAAACGAAACTTGCTCGGCTTGACC 31067
||| ||||| | ||| || | ||| || || || |||| || ||||||||||| ||
Sbjct 1480 TTGCTCCATCCGGGCCTTCTGCCAACCGCCGGCGCGGAACGCTACCTGCTCGGCTTGGCC 1539
Query 31068 TAAAACGACGCGGCCTTGCTTTTCGAATGAGTCGGAAGCCCACAT 31112
| ||| |||||| ||| | ||||| | || ||||||||
Sbjct 1540 CAGAACTGTGCGGCCCTGCCTCTCGAAGCACGACGACGCCCACAT 1584
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 118175956007552
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |