Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09]
3,088,511 sequences; 2,785,377,831 total letters
Query= NC_021190.1
Length=46150
Score E
Sequences producing significant alignments: (Bits) Value
seq2884985 84.2 6e-12
>seq2884985
Length=308
Score = 84.2 bits (92), Expect = 6e-12
Identities = 166/244 (68%), Gaps = 14/244 (6%)
Strand=Plus/Minus
Query 19827 CGCGGGGATGGGTATCGGCGTGGAGAATACGCCATCCGGCATGCAGTCGCAGGTTATCTT 19886
|||||| || || | || ||||||| | | |||| ||||||||||| | ||| |
Sbjct 291 CGCGGGTATCGGGCTTGGGTTGGAGAACGGGTCGGGCGGCCTGCAGTCGCAGTTCATCAT 232
Query 19887 CCTGGCTGACCGCTTCGCCGTCACCACGGC-AGCCGGAAATAGCGTAGCTTTGCCGTTCG 19945
| || ||||| |||||| || ||| |||||| || | |||| || |
Sbjct 231 CGACGCCGACCGGTTCGCCATC----GGGCAAGCCGG-CATCG--------TGCCCTTTG 185
Query 19946 TGATCCAGAACGGGCAGACATTCATCCGGGCCAGCTTCATCCAGGACGGCACTATCAGCA 20005
| | ||| |||||||| ||||| | ||||||||||||||||| |||| ||
Sbjct 184 CGGTACAGGGTGGGCAGACTTTCATTAAATCGGCTTTCATCCAGGACGGCACGATCACCA 125
Query 20006 ACGCAAAGATTGGTAATTTTATCCAGTCGAACAATTATGTTGCTGGTTCTGCTGGCTGGA 20065
|||| ||||| || || | |||||||| || || || | | ||| ||||||||||
Sbjct 124 ACGCCAAGATCGGCAACTACATCCAGTCCAATAACTACGACCCAGGTAAGGCTGGCTGGA 65
Query 20066 AGCT 20069
||||
Sbjct 64 AGCT 61
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 142146538069184
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |