Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09] 3,088,511 sequences; 2,785,377,831 total letters Query= NC_021299.1 Length=80955 Score E Sequences producing significant alignments: (Bits) Value seq2955700 129 3e-25 >seq2955700 Length=463 Score = 129 bits (142), Expect = 3e-25 Identities = 115/144 (80%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 61691 AGATGCCGTTCATCTACCCGCACCTGGCGCTGATGCCGGATGCCCACTCGGGCAAGGGAT 61750 |||||||||| |||| | |||||| ||| |||||||||||| ||| ||||||||| | Sbjct 433 AGATGCCGTTTATCTTCAAGCACCTCGCGGTGATGCCGGATGTGCACCTGGGCAAGGGTT 374 Query 61751 CTGCGGTCGGCACCGTCATCCCCACCAAGGGCGCTGTCATTCCGGCCGCTGTTGGGGTGG 61810 | | |||||| ||| |||||||| |||||| | || ||||| || || || |||| Sbjct 373 CGACCATCGGCAGCGTAATCCCCACGGTGGGCGCGATTATCCCGGCGGCGGTGGGCGTGG 314 Query 61811 ACATCGGCTGCGGCATGATTGCCG 61834 ||||||||||||| |||||||||| Sbjct 313 ACATCGGCTGCGGGATGATTGCCG 290 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 249184711713036