Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09]
3,088,511 sequences; 2,785,377,831 total letters
Query= NC_021534.1
Length=47552
Score E
Sequences producing significant alignments: (Bits) Value
seq2799564 87.8 5e-13
>seq2799564
Length=235
Score = 87.8 bits (96), Expect = 5e-13
Identities = 132/185 (71%), Gaps = 2/185 (1%)
Strand=Plus/Plus
Query 33249 CGCTGTGTGCAATCTGTCTCTGGCAACATCAGAGCAGTGGAACGATAAAGCA-ACAGGGG 33307
||| ||| ||| ||| |||||| || || ||||||| || || ||| || ||
Sbjct 22 CGCCGTGACCAACCTGAGTCTGGCGACCAGCGAACAGTGGACTGACAA-GCAGACCGGCC 80
Query 33308 AAAAGAAAGAGCAGACAGAATGGCATCGCGTGGTTATCTTCGGAAAGCTGGCAGAGGTGG 33367
| ||| ||| | || |||||||| |||||| || ||||| ||| | |||||| | |
Sbjct 81 AGAAGGTCGAGAAAACCGAATGGCACCGCGTGTCGATGTTCGGCAAGGTTGCAGAGATCG 140
Query 33368 CTGGCGAATACCTGCGCAAAGGCTCTCAGGTGTATGTAGAAGGAAAATTACGTACTCGCA 33427
| ||||| |||||||||||||| || ||||| || | ||||| ||| | | || |||
Sbjct 141 CCGGCGAGTACCTGCGCAAAGGTTCGCAGGTTTACATCGAAGGCAAACTGCAAACCCGCG 200
Query 33428 AATGG 33432
| |||
Sbjct 201 AGTGG 205
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 146468394557148
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |