Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09] 3,088,511 sequences; 2,785,377,831 total letters Query= NC_021774.1 Length=29742 Score E Sequences producing significant alignments: (Bits) Value seq3088488 351 2e-92 seq3088503 329 6e-86 seq3063309 120 6e-23 >seq3088488 Length=17142 Score = 351 bits (388), Expect = 2e-92 Identities = 1142/1753 (65%), Gaps = 98/1753 (6%) Strand=Plus/Minus Query 14061 GATTTTCACCACGGCACGCAGGTCATCGAAATTAATGACGGTACGCGTGTTATTTCCACA 14120 |||| || ||||||| || |||||||||| | || ||||| || || ||| ||| Sbjct 16622 GATTATCTCCACGGCGTGCGGGTCATCGAACTCAACGACGGCACCCGCCCCATTCGCACT 16563 Query 14121 GTAGCGACTGCAGTCGTTGGCATGGTCTGTACAGCCAGCGATGCAGATGCCACGCTGTTT 14180 | | || |||||| | |||||||| || || || ||||| || |||| | ||| Sbjct 16562 ATTCCCACCGCAGTCATCGGCATGGTTTGCACCGCTGAAGATGCGGAC-CCACTCGTTTT 16504 Query 14181 CCC-CTCAATGAGCCGGTGCTGATTACCAATGTGCAAAGCGCCATTGCGAAAGCCGGTAA 14239 ||| || | || || || || ||||| ||||||| |||| | | || ||||| Sbjct 16503 CCCTCTGGACACTCCAGTCCTCATCACCAACGTGCAAACCGCCGTCGGCAAGGCCGGCGT 16444 Query 14240 AAAAGGCACGCTGTCTGCTTCCCTGCAGGCAATCGCCGACCAGTCAAAGCCTGTCACCGT 14299 || ||||| ||| |||| |||||| | |||||||||||| | |||||| | || Sbjct 16443 CAAGGGCACCCTGGCTGCCAGCCTGCAAGGCATCGCCGACCAGACCAAGCCTTAC---GT 16387 Query 14300 TGTCGTG---CGTGTTGCCGAAGGTACCGGAGACGACGCAGAAGCGCAGACCACATCCAA 14356 | ||||| || || ||||| || ||||| |||| ||| || | Sbjct 16386 TATCGTGGTACGGGTCAAAGAAGG---CGCTGACGA------AGCGACGACTACGAGCGC 16336 Query 14357 CATTATCGGCGGCACGGATGAGAACGGTAAGTACACCGGTATCAAGGCGCTGTTAACTGC 14416 | | || ||||| || | |||| | |||||||| || || || ||| | | || Sbjct 16335 CCTGATTGGCGGTACAACACCAACCGGTCAATACACCGGCATGAAAGCTCTGCTCGCAGC 16276 Query 14417 CGAAGCGGTCACCGGTG----TTAAGCCGCGCATTCTCGGTGTGCCGGGTCTCGATACGC 14472 | || |||| ||| | | ||||| || || || ||||| || ||||| | Sbjct 16275 CAAA----TCACGCGTGGGCATGACTCCGCGTATCCTTGGCGTGCCAGGCCTCGACAGTT 16220 Query 14473 AGGAGGTTGCAACTGCACTTG-CGTCGGTTTGTATCAG-CCTGCGCGCCTTTGGTTATGT 14530 | || || || || || | || | | | || |||||||||||||| || || Sbjct 16219 TGCCAGTAGCCACCGCCCTCGGCGCCA--TCGCCAAAGACCTGCGCGCCTTTGCATACGT 16162 Query 14531 CAGCGCATGGGGCTGTAAAACCATTTCCGAGGCGATAGCCTATCGTGAGAATTTCAGCCA 14590 ||||| ||| ||| ||||||| |||| | || || || ||||| ||| | Sbjct 16161 AAGCGCCTGGAACTGCAAAACCAAGGAAGAGGTAGTGGCGTACCGCGAGAACTTCGGTGC 16102 Query 14591 GCGTGAGTTGATGGTTATCTGGCCTGATTTCCTCGCGTGGGACACCGTCAAAAATGCCAC 14650 || || ||||||| || ||||| || ||||| |||||||| |||| || || Sbjct 16101 CCGCGAAATGATGGTGATTTGGCCGGACTTCCTGAACTGGGACACTGTCACCAACAAGAC 16042 Query 14651 CGCAACTGCTTACGCCACTGCGCGTGCACTCGGCCTGCGTGCTTACATCGACCAGACTGT 14710 ||| | |||| ||| || || || |||||||| || || | |||||||| | | Sbjct 16041 CGCCAGCGCTTCGGCCGTGGCCCGCGCCCTCGGCCTTCGCGCCAAGATCGACCA-AGAGA 15983 Query 14711 CGGCT-GGCACAAAACCCTGTCTAACGTTGGTGTACAGGGCGTTACCGGCATCAGTGCCT 14769 ||| | |||| ||||||||||| ||||| | || ||||| ||||| ||||| ||| Sbjct 15982 CGGGTTGGCATAAAACCCTGTCCAACGTGGCCGTGAGTGGCGTGACCGGTATCAGCGCCG 15923 Query 14770 CAGTGTTCTGGGATTTGCAGGCATCCGGCACCGATGCTGACCTGCTCAACAAGGCCGGGG 14829 |||||||||||| |||| | | |||||| || || ||||||| || | Sbjct 15922 ACGTGTTCTGGGATCTGCAAAACCCAGCCACCGACGCCAACTACCTCAACAGCAACGACG 15863 Query 14830 TTACGACGCTGGT--ACGCAAGGACGGTTTCCGTTTCTGGGGTAACCGCACCTGCTCAGA 14887 | || || ||| | |||| | ||||||| || |||||||||| |||||||||| || Sbjct 15862 TCACCACCCTGATCAACGCCA--ACGGTTTTCGCTTCTGGGGTAGCCGCACCTGCAGTGA 15805 Query 14888 TGACCCGCTTTTTCTGTTTGAGAACTACACCCGTACCGCGCAGGTACTGGCCGACACGAT 14947 ||||||| | || || || ||||||||||| ||||||||| | || || ||||| || Sbjct 15804 TGACCCGTTGTTCGCCTTCGAAAACTACACCCGCACCGCGCAGATCCTCGCGGACACCAT 15745 Query 14948 GGCTGAAGCGCACATGTGGGCGGTCGATAAGCCCATTACCGCCACGCTCATTCGTGACAT 15007 || ||||||||||||||||| || || || || |||| | || | || ||| | Sbjct 15744 GGGCGAAGCGCACATGTGGGCAGTTGACCGCCCTATGCACGCCTCCCTGGTACGCGACCT 15685 Query 15008 TGTTGACGGCATCAATGCCAAATTCCGCGAGCTGAAAACAAACGGCTACATCGTGGACGG 15067 || || ||| | | ||||| | |||||| ||||| | | |||||| | | | ||| Sbjct 15684 GGTCGAAGGCGTAAGCGCCAAGATGCGCGAGTTGAAATCCCAGGGCTACCTGATCGGCGG 15625 Query 15068 TGAATGCTGGTTCGACGAGGA-ATCGAACGACAAGGAAACCCTGAAAGCCGGGAAACTGT 15126 |||||| | || || ||| ||| ||| || ||||| || ||||| || || | Sbjct 15624 CAGTTGCTGGAACCCGGACGACATC-AACACCAAAGACACCCTCAAGGCCGGCAAGCTCT 15566 Query 15127 ATATCGACTACGACTATACGCCGGTTCCGCCACTGGAGAGCCTGACCCTGCGCCAGCGTA 15186 | || |||||||| || || || |||||||| || ||| ||| | |||||||| | Sbjct 15565 GGCTTGATTACGACTACACCCCCGTGCCGCCACTTGAAGACCTCACCTTCCGCCAGCGAA 15506 Query 15187 TCACCGATAAATATCTGGTGAATCTGGCCGAATCGGTCAACAGCTAA------------- 15233 ||||||| || ||| | | | ||| | ||| ||||||| Sbjct 15505 TCACCGACCGTTACCTGATCGACTTCGCCAAGGGCATCAGCAGCTAAACCGGGTCTCCCC 15446 Query 15234 ------GGAG-----CCTGAA------------ATAA------CATGGCACTACCCCGTA 15264 |||| |||||| | || ||||||| | || || | Sbjct 15445 GCGAGGGGAGTTCACCCTGAACACGTATCCCGGAGAACACCGCCATGGCAATGCCTCGCA 15386 Query 15265 AACTCAAATATCTGAATATGTTCAACGATGGCCTCAGCTACATGGGTGTTGTTGAA-TCC 15323 | |||||| | || || ||||||| || ||| |||||| | || ||| |||| ||| Sbjct 15385 AGCTCAAAAACCTCAACCTGTTCAATGACGGCAACAGCTATCTCGG-CTTGGTGAAGTCC 15327 Query 15324 GTAACGTTGCCGAAGCTGACCCGCAAGCTCGAAAACTATCGCGGCGGCGGTATGAATGGC 15383 | || |||| || ||||||| | ||| |||||||||||||| ||||||||| Sbjct 15326 CTCACCCTGCCCTCCCTCGGCCGCAAGATGGAAGCGTATCGCGGCGGCGGCATGAATGGC 15267 Query 15384 GCGG-CAGCGATTGACCTCGGCCTCGACGATGATGCGCTCACCGTCGAATGGTCTGTCGG 15442 ||| || | |||||| ||| | ||| || | || |||||||| ||| Sbjct 15266 CCGGTCAAAG-CTGACCTGGGCATGTCCGACGACGGCATCCAGTTCGAATGGAAGACCGG 15208 Query 15443 CGGCCTGCCTGATGTG-GCGCTGTGGGCGCAGTACGCCGCCCCGGGT----GCTGATGCT 15497 ||||| ||| || | || || | |||| || ||| ||| || | Sbjct 15207 TGGCCT---CGATCTGATCTCTCTGCG-TCAGTTCGGCGC----GGTCAACGCCTCCAGT 15156 Query 15498 GTGCCGCTGCGTTTTGCCGGTTCTTACCAGCGCGACGACACCGGCGAAATCGTGGCGGTC 15557 ||| | ||||| || | || ||||||||| |||||||| |||||| || || Sbjct 15155 GTGGCCCTGCGATTCTCTGGCCCTTACCAGCAAGACGACACAGGCGAAGTCAGCAATGTG 15096 Query 15558 GAGGTGGTCATGCGTGGCCGTCATAAAGAAATCGACGGCGGCGAGAATAAGCAGGGTGAA 15617 || ||||| ||||||||||||| || ||||| ||||| ||| || || Sbjct 15095 GAAGTGGTTGTGCGTGGCCGTCACGAAACCATCGAGATGGGCGATGCCCAGCCCGGCGAG 15036 Query 15618 AACACCTCGACAAAAC-TGTCGACTGTCTGCACCTACTACCGCCTCACGATTGATGGTAG 15676 ||| || ||| | || | || ||||| ||||||| || || | ||||| Sbjct 15035 GACA-CTGAACACTCCATGACCACCACCTGCAGCTACTACAAGCTGACCGTAGATGGCGA 14977 Query 15677 CGACGTCATCGAAATCGACACCGTCAACATGGTCGAGAAGGTGAACGGCGTCGACCGTCT 15736 || ||||||| ||||| ||||| | ||||||||||| ||||| || ||| || Sbjct 14976 AGAAATCATCGAGATCGATCTGCTCAACTTTGTCGAGAAGGTCAACGGTGTGGACATGCT 14917 Query 15737 GGAGCAGCACCGC 15749 |||| |||||||| Sbjct 14916 GGAGAAGCACCGC 14904 >seq3088503 Length=21467 Score = 329 bits (364), Expect = 6e-86 Identities = 971/1466 (66%), Gaps = 43/1466 (3%) Strand=Plus/Minus Query 1318 GCGCCCGC-TGCTGGTCATGGTTTTGCGGATGGACATAAACGACTGTGTGACGTCAGTTG 1376 ||| |||| ||| ||| | || |||||||| | ||| | |||||| | | ||| || Sbjct 11402 GCGACCGCCTGC-GGTGACCGTCTTGCGGATCGCCATCATCGACTGCGCCATGTCGGTCC 11344 Query 1377 CACCGGCGTCGTACTCCAGACAGCCACGGCGAATCGTGTCTTTCGCCTTGAGTACCATTG 1436 ||||||||| ||||||| | ||| | ||| ||| | ||||| || |||| | Sbjct 11343 ACCCGGCGTCGAACTCCAGCCGGCCGTTATGGATCACGTCATAGGCCTTCAGCACCAG-G 11285 Query 1437 CG-GTTTTCATTTCTGGCGTGTAACGGATACCGCGAGCCGCCGGGTAGAATGAGCGCACC 1495 || ||||| | ||| |||| || | || | | |||||| |||| ||||||| Sbjct 11284 CGTGTTTTGACTTCGGGCGAATAGCTGAAGGTGGTCACAGCCGGGAAGAACTGGCGCACC 11225 Query 1496 AACTGGAATACGCCGAGACCGAGGCCGGTCGCGTCAATGCCGATGTATTCGACGTTGTAT 1555 | ||| |||||| ||| || ||||| | ||||| ||||| || || ||| Sbjct 11224 AGCTGCGCCACGCCGCTACCCAGCCCGGTGACATCAATCCCGATATAGGTCACCCAGTAG 11165 Query 1556 TTCTCAGTGAGCCTGCGGATGCCTTCTGCCTGCGCGGCAAAGTCCATGCCTTTCCACTGG 1615 || || | ||| | | ||||| || |||||||||||||| | ||| Sbjct 11164 CGGTCGCAGACGTTTTTGATAAATGCCGCCTGGGCCGCAAAGTCCATGCCCCGGAATTGG 11105 Query 1616 TGACGCTCCAGCATGCGAAACTTGCCACCCGAAACCACCGGCGGCGCGAGTACGACACAT 1675 || |||||||| | ||| || ||||| |||| |||| ||||||||| | || || Sbjct 11104 TGCCGCTCCAGGACGCGGAATTTGCCGCCCGGTACCAGCGGCGGCGCAACCACCACCAGC 11045 Query 1676 CCGGCACTGTCGCCAGTGTGGGACGGGTCGTAGCCAATCCAGACCGGGCGCGAGCCGAAC 1735 |||| | || || || | | ||||||||||| ||||| ||| | || |||||| Sbjct 11044 CCGGAGCAATCACCGGTTTCCGCTGGGTCGTAGCCGATCCATACCTGACGGTCACCGAAC 10985 Query 1736 GGGTGGTCGGCGAACGGGGCGAAGTCCTC---CCATGTTTCCATC--AC-GTCGACCATG 1789 || | |||||| || | ||||||| |||| || | | || |||||||||| Sbjct 10984 GGCCGCATGGCGAATGGCTTGTAGTCCTCTGCCCAT---TCAACCCAACTGTCGACCATG 10928 Query 1790 CAGCGCTGCAGCTCCTCGAACGGGAATACCGATGCCTT-ATCGTCGACAAACTCGCACAT 1848 |||| ||||||| | | ||||| || | | || || |||||| |||||||| ||||| Sbjct 10927 CAGCTCTGCAGCAACGCCAACGGAAAGAT-GCTGGCTCCATCGTCAACAAACTCACACAT 10869 Query 1849 AAACAGGTTCTTAAAGTCCTCATCACTGTTTTCGCGTCTGAGCTGGTCGAGGTCGAACAG 1908 |||||||| || ||||| |||| || || | | || || | ||||||||| Sbjct 10868 CAACAGGTTGGCGAACGCCTCAGGGCTGTACTCCCGACGCAACTCCTCAATGTCGAACAG 10809 Query 1909 GGTGCAGCCACCGGCAAGGGCGTCCTCAATAGTGACAATCTGCCGCCACTGTCCGTCAGC 1968 ||||| ||| |||||| || ||||| |||||||||||| | ||| | Sbjct 10808 ATCACAGCCGCCGTGCTCTGCGTCCAGGATGGTGACGATCTGCCGCCACAACCGGTCCTC 10749 Query 1969 GCAAAGAAGCCCACCGGC--GAGCGCGCTGTGACTGATGTCGATTTCGATGCGGTCAGCA 2026 ||| ||| | | || | |||||| | ||| | ||||| | | || | | || Sbjct 10748 GCA--GAACCGCCCCTGTTGGAGCGCCCCGTGGGAAACGTCGACCTTGGTGTGTTGCGCC 10691 Query 2027 GCACTGGCGCGCCCCTTGTTGAACAGCTCGCCAGACCAGAAGGGATAAGCGCCGTGCGCC 2086 || |||| ||| |||||||| ||||||| | |||||||| || || | || ||| Sbjct 10690 GC--TGGCTTACCC-TTGTTGAAGCGCTCGCCGGTCCAGAAGGTGTAGGCCTCATGGGCC 10634 Query 2087 AGCGTGGAAGGTGTCGAAAAGTAAGTTGAGCGCAGATGCTTCTGCGAGGCCATGCCCGAT 2146 | |||| || ||||| ||||| ||| |||| | ||| ||| |||||||||||| Sbjct 10633 ATGCTGGACGGCGTCGAGAAGTAGGTTTTGCGCCACTTCTTGTGCATGGCCATGCCCGAA 10574 Query 2147 GCGACTTTGCGCAGCTTCTGAAAATTCGGGATCCAGAATATTTCATCGACATACAGGTCG 2206 ||||| ||| ||| | || ||| || ||||||| | ||| |||| || | | | Sbjct 10573 GCGACCTTGTTCAGTTCCTCAAACTTGAACGTCCAGAAGAATTCGTCGAAGTAGAAATTG 10514 Query 2207 CCGTTATGGCTTTGTGCGGTGTTGGAATTGGTGCCGAGAAAAATCAGCTTTGCGCCGTTG 2266 |||| | || || ||||| | |||||| ||||| |||| ||||| ||||||||| Sbjct 10513 CCGTGGTAGCCCTGGGCGGTACGCGCATTGGTACCGAGGAAAAACAGCTCGGCGCCGTTG 10454 Query 2267 TTGCCGATAACAATCGGGTCGCCGGTCAGGTCGA---CGTCAACCAGTCGCGCAAACTGG 2323 | | || || || || || || ||||| |||| || |||| || ||||| || Sbjct 10453 --GGCAAT-ACGATGGGATCCCCCGTCAGCTCGACACCGATAACCTCACGGGCAAA-TGC 10398 Query 2324 AT-GATGTATTCCCGGAACACGTAAGCCTGCGTTTTACTGGCCGACAGAAAAATCTGGTT 2382 | |||||| | || |||| || || || |||| || ||||| || ||||| || Sbjct 10397 CTGGATGTACCCGCGAAACAGATAGGCTTGGTTTTTCGATGCGGACAGGAAGATCTGATT 10338 Query 2383 ATGGCCGGTCTTGAGCGCGCGCAGCAGTGCCTCGCGGGAAAAGTAGAACGTCGCGCCAAT 2442 | ||||| | ||||| || | |||||||||| |||||| | |||||||| || Sbjct 10337 GCGCCCGGTTTCCAGCGCATCAAGAAACGCCTCGCGGGCAAAGTAATAGGTCGCGCCGAT 10278 Query 2443 CTGGCGGGATTTGAGAATATCGCGAATACGGTGCGCCAGT-CCTGCCCGGTACCACTGCA 2501 ||| ||| |||||| || ||||| | || || | | || ||||||||||| | Sbjct 10277 CTGCCGGCTTTTGAGGATGACGCGAGTCCGTTG----ATTGCCAGCCCGGTACCAGTCTT 10222 Query 2502 ACTGGTATTCGAAAGACTGGTCGAAGAAAATTTCTTCCAGCTTTGCGACAGCCTCATCGC 2561 |||||| |||||| | ||||| || ||| || | ||| ||| |||| Sbjct 10221 TCTGGTAGTCGAAACAGCCGTCGATAAACGCTTCACGCAACAGCTCGATCTGCTCTTCGC 10162 Query 2562 TGAAAAAGTTCTTTTTCGGCCTCTTAC-GCTCCCCTTTGTTACGGTTGGCAACGTTGGGG 2620 ||| | ||| |||| || || || | | || | ||| || || || | ||| ||| Sbjct 10161 TGATATCGTT-TTTTGGGGTCTTTTTCTTCGGACCCTCGTTGCGTTTAGCCAGGTTAGGG 10103 Query 2621 TTAAGGTCGGCCTCGTTGCCGGTCTGGCTG-TAGCGGTTGACGCGCGCCAGTCGCTCAAT 2679 || || |||| ||| | || | | ||| |||| | | | ||| | || || | Sbjct 10102 TTGAGCTCGGTTTCGGTACC-GCCGCCCTGAAAGCGCTGAATTCTGGCCTGGCGTTCCAA 10044 Query 2680 CTGCCGCCCGAGCAGGTCAATCTCTTTGAAGTCGCCGCCTGACTTTTGC--GGCTTGGCG 2737 || || ||||| ||||| || |||||||| ||||| || |||| |||| | Sbjct 10043 TTGGCGGTGCAGCAGATCAATTTCCTTGAAGTCCCCGCC--GCTCTTGCTTTCCTTGAGG 9986 Query 2738 ATGAGCTGAATCAGGCGCGCCTCAAG 2763 || ||||| | || ||||| || || Sbjct 9985 ATCAGCTGCACCAACCGCGCTTCCAG 9960 Score = 111 bits (122), Expect = 3e-20 Identities = 201/294 (68%), Gaps = 0/294 (0%) Strand=Plus/Minus Query 4721 TATCAGGATGACCCGAAACTCGTTGCCATCGTTGGCCGTAAGCTGCTGGCCGACAAATAT 4780 || ||||| ||||| | || || | ||| || || | |||||||||||||| ||| Sbjct 8099 TACCAGGAAGACCCTGATCTGGTGGTGATCTGCGGTCGCCAACTGCTGGCCGACAAGTAT 8040 Query 4781 TTCCCGCTGGTGAACAAGCCGCAGGAAAACAGCGAGGCGCTCGCGGCAGATATCATCATC 4840 |||||| | | ||||| | | | || ||| || || |||||| ||| | Sbjct 8039 TTCCCGATCATCAACAAAGACAACGCGCCGACTGAAATGCTGGCCGCCGATATCGTCACC 7980 Query 4841 AGCCAGAAGCGAATCGGCAACCTGCCTGCTGTGCGTGTGCCGTACTTCCCGGCGAATGCC 4900 || || ||||| | ||||| |||| || ||||| ||||| ||||||||| || | Sbjct 7979 AGTCAAAAGCGCTTGGGCAATTTGCCAGCCGTGCGCGTGCCTTACTTCCCGCCGCGCGGG 7920 Query 4901 GTGTTAGTGACCACGCTGGAAAACCTCTCTATCTATTTCATGGATGAGAGCCACCGCCGC 4960 || | || |||| |||||||||||| || ||||| | ||| | |||| ||||||| Sbjct 7919 TTGCTGGTCACCAAGCTGGAAAACCTGTCGATCTACTGGCAGGAAGGCAGCCGCCGCCGC 7860 Query 4961 AGCATTGATGAAAACCCGAAAAAAGACTGCGTGGAAAACTACGAGTCGATGAAT 5014 | | | | || || | || ||| || | ||||||||||||||| | ||| Sbjct 7859 ACCGTCGTCGACAATGCCAAGCGTGACCGCATCGAAAACTACGAGTCGGTCAAT 7806 Score = 87.8 bits (96), Expect = 3e-13 Identities = 205/308 (67%), Gaps = 6/308 (2%) Strand=Plus/Minus Query 354 TTTTTGAT---GTTGAAAAAGTCATCCTTTGTGGCGACCTCGCTCAATGGCACGATTTTT 410 |||||||| |||||| |||||||| | || ||||| || | || | | | | Sbjct 12339 TTTTTGATCGAGTTGAAT---TCATCCTTGGCCGCCACCTCACTGACCGGGATCAGCTGT 12283 Query 411 ATGCCGTCCGGTTTCCCGTTCGGTGAGTAGAAAAACAGGTTTTTAAAGTTGCCGAGCCCT 470 || |||||| || ||| | || || || | ||||| ||| ||| ||||| |||| Sbjct 12282 ATCCCGTCCTTCTTGCCGGTGGGCGAATACACAAACAAGTTGCGAAAATTGCCTGGCCCC 12223 Query 471 TTAGAGTTACGCATTGCATCGCGCAGCGATTCGACGTCAGTCGCGCTTTGCGCCGGGTCA 530 || |||| | || | ||||| | |||| || || | | || || | || Sbjct 12222 TTGGAGTCCTTGAGAGCCTTGCGCAAAGCGTCGATATCGGTTTCAGTCTGTGCGGCATCG 12163 Query 531 GTCACATACATGATGTAACCTGCGTGCGCGCCGTTCTGGTAATACTTGCGGCGGAACAGC 590 |||| || | ||| | || ||||| ||| |||| ||| |||||||||||||||| | Sbjct 12162 GTCATGTAGAGAATGAAGCCGGCGTGACTGCCATTCTCGTAGTACTTGCGGCGGAACAAC 12103 Query 591 GTCGCGGATTCATTCAGCCAGGCGGAATTAAGTGCGCTGAGATATTCAGGCAGGCCGTAA 650 || || ||||| || ||| | || || | | || || | | || |||| ||| ||| Sbjct 12102 GTGGCCGATTCGTTGAGCAACGCCGACTGCAAGGCACTAATCCACTCCGGCAAGCCATAA 12043 Query 651 ATCTCCTG 658 |||||||| Sbjct 12042 ATCTCCTG 12035 >seq3063309 Length=1409 Score = 120 bits (132), Expect = 6e-23 Identities = 282/419 (67%), Gaps = 10/419 (2%) Strand=Plus/Minus Query 2053 CTCGCCAGACCAGAAGGGATAAGCGCCGTGCGCCAGCGTGGAAGGTGTCGAAAAGTAAGT 2112 |||||| |||||||| || || || ||||| | | | || ||||||||||| || Sbjct 416 CTCGCCCGACCAGAACGGGTACGCTTGGTGCGAGACTGCGCTGGGCGTCGAAAAGTAGGT 357 Query 2113 TGAGCGCAGATGCTTCTGCGAGGCCATGCCCGATGCGACTTTGCGCAGCTTCTGAAAATT 2172 | |||| | ||| || | | ||||| | || || ||| || || | || | Sbjct 356 TTTGCGCCACTTCTTGTGGGTGCCCATGGCACTGGCCACGGTGCTGAGTTTGTCGAAGTC 297 Query 2173 CGGGATCCAGAATATTTCATCGACATACAGGTCGCCGTTATGGCTTTGTGCGGTGTTGGA 2232 | ||||| || |||||||| || | || ||| | | || || |||||| || Sbjct 296 ACGTATCCAAAAATACTCATCGACGTAGACGTGGCCATGGTAGCCCTGGGCGGTGCTGCT 237 Query 2233 ATTGGT-GCCGAGAAAAATCAGCTTTGCGCCGTTGTTGCCGATAACAATCGGGTCGCCGG 2291 |||||| | | ||||| ||||| ||||||||| || | | |||||| ||||| Sbjct 236 ATTGGTCGACAAGAAACG-CAGCTCGGCGCCGTTGCTGAGCGTGA---TCGGGTTGCCGG 181 Query 2292 TCAGGTCGACGTC-AACCAGTCGC---GCAAACTGGATGATGTATTCCCGGAACACGTAA 2347 |||| |||| ||| ||||| | || ||||||||||||||||| ||||| | | Sbjct 180 TCAGCTCGATGTCGAACCACT-GCTTTGCAAACTGGATGATGTAACTGCGGAAAATTTCC 122 Query 2348 GCCTGCGTTTTACTGGCCGACAGAAAAATCTGGTTATGGCCGGTCTTGAGCGCGCGCAGC 2407 | ||||| ||||||||||| || | |||||| | ||||||| | ||| || Sbjct 121 GACTGCGAGCGGCTGGCCGACAGGAACACCTGGTTGTCGCCGGTCAGCACGGCGTCCATG 62 Query 2408 AGTGCCTCGCGGGAAAAGTAGAACGTCGCGCCAATCTGGCGGGATTTGAGAATATCGCG 2466 | || |||| || |||||| ||||| ||| | ||||||| ||| || || | ||| Sbjct 61 AACGCTTCGCCGGCGAAGTAGTACGTCAGGCCCACCTGGCGGCTTTTCAGGATGTTGCG 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 91566637031728