Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09] 3,088,511 sequences; 2,785,377,831 total letters Query= NC_021798.1 Length=145343 Score E Sequences producing significant alignments: (Bits) Value seq175273 82.4 7e-11 >seq175273 Length=2925 Score = 82.4 bits (90), Expect = 7e-11 Identities = 64/75 (85%), Gaps = 1/75 (1%) Strand=Plus/Minus Query 89906 CCTTGTAGCTCAGTTGGTTAGAGCAGCTCACTCATAATGAGAAGGTCTCAGGTTCGAGTC 89965 || |||||||||||||| ||||||||| ||||| ||| | ||||||| ||||||||| || Sbjct 162 CCGTGTAGCTCAGTTGG-TAGAGCAGCGCACTCGTAACGCGAAGGTCGCAGGTTCGACTC 104 Query 89966 CTGACTAGGCCACAA 89980 ||| || || ||||| Sbjct 103 CTGTCTCGGGCACAA 89 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447018803446680