Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09] 3,088,511 sequences; 2,785,377,831 total letters Query= NC_022052.1 Length=76050 Score E Sequences producing significant alignments: (Bits) Value seq240294 84.2 1e-11 >seq240294 Length=15375 Score = 84.2 bits (92), Expect = 1e-11 Identities = 57/64 (89%), Gaps = 0/64 (0%) Strand=Plus/Minus Query 66009 GGACTCGAACCCCGGACCTACTGATTAAAAGTCAGCAGCTCTACCAACTGAGCTAACGCG 66068 ||| |||||||| |||||||||||||| ||||||| ||||||||||||||||||| || Sbjct 3748 GGAGTCGAACCCGGGACCTACTGATTACAAGTCAGTTGCTCTACCAACTGAGCTAAACCG 3689 Query 66069 GCGT 66072 |||| Sbjct 3688 GCGT 3685 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 234079528424781