Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09]
3,088,511 sequences; 2,785,377,831 total letters
Query= NC_022067.1
Length=109960
Score E
Sequences producing significant alignments: (Bits) Value
seq3066367 109 4e-19
seq2899236 91.5 1e-13
>seq3066367
Length=1492
Score = 109 bits (120), Expect = 4e-19
Identities = 130/174 (75%), Gaps = 7/174 (4%)
Strand=Plus/Plus
Query 95677 GTTGGATTTGATAAGGCCTGTGACTACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAG 95736
||||| ||||| ||||| |||| |||||||| || |||||||| || || |||| ||
Sbjct 919 GTTGGCCTTGATCAGGCCGGTGATCACATCCACCGACGGCCGCTGGGTGGCGAGGATCAG 978
Query 95737 ATGAATGCCGGCTGCGCGCGCCTTCTGGGCGATGCGGACAAT--GTTGGCCTCGACTTCT 95794
|| || ||||| || || |||||||||||||| || | || ||| | |||| |
Sbjct 979 GTGGATCCCGGCCGCACGGGCCTTCTGGGCGATACGCGCGATCAGTT--CTTCGA---CC 1033
Query 95795 TTCTTGTAGCCGCCCATCATGAGGTCTGCCAGCTCGTCGACCACTACCACGATG 95848
|||||| | || |||||| | ||| || | ||||||||||| |||||||||
Sbjct 1034 TTCTTGCCGACGATCATCATCATGTCGGCGAATTCGTCGACCACCACCACGATG 1087
>seq2899236
Length=330
Score = 91.5 bits (100), Expect = 1e-13
Identities = 140/198 (71%), Gaps = 4/198 (2%)
Strand=Plus/Plus
Query 95960 TCGGTGACCACCGGCTGCAAA--AGGTGGGGGATACCGTTGTATGGGGTGAGTTCCACCA 96017
|||||||||||||| ||| | ||||| || || || | ||| | ||||||| ||
Sbjct 29 TCGGTGACCACCGG--GCAGAGCAGGTGCGGAATGCCTTCGTAGATCGACAGTTCCAACA 86
Query 96018 TCTTCGGGTCGATCATGATGAGCTTGACCCGATCAGGATTGGCTCGGTAGAGCATGGAAA 96077
||||||||||||||||||| |||||| | ||| || | | | | || || || |
Sbjct 87 TCTTCGGGTCGATCATGATCAGCTTGGCGTCATCCGGGCCAGATTTGAACAGGATCGACA 146
Query 96078 CCAGCATCGAGTTGATGAAGCTGGACTTGCCCGATCCGGTGGCGCCAGCCACCAGCAGGT 96137
| ||||| ||| | | || || || || ||||||| || || ||||||| ||
Sbjct 147 GGATCATCGCGTTCACGCCCACCGATTTACCGGAACCGGTGGTACCGGCTACCAGCAAGT 206
Query 96138 GGGGCATTTTGGCCAGGT 96155
| |||||||| |||||||
Sbjct 207 GCGGCATTTTCGCCAGGT 224
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338507003512391
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |