Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09]
3,088,511 sequences; 2,785,377,831 total letters
Query= NC_022752.1
Length=42665
Score E
Sequences producing significant alignments: (Bits) Value
seq274481 84.2 6e-12
>seq274481
Length=3169
Score = 84.2 bits (92), Expect = 6e-12
Identities = 164/236 (69%), Gaps = 16/236 (7%)
Strand=Plus/Minus
Query 1190 GCTTACATCAACGGTGAATTTGTCAACCTGACATCCGGCAGTGTTTATTACGCTTACGAC 1249
|| ||| |||||||| | || |||||||||||||| ||| | || || | ||||||
Sbjct 1455 GCCTACCTCAACGGTCAGTTCGTCAACCTGACATCGGGCTCGATCTACCACTCGTACGAC 1396
Query 1250 CGGCGTAAGAACAG-CAGTCGG--GAGACTATACAACCAGGCGAAACGCTGTATATCGGT 1306
|| ||| ||| |||| || ||| | || || |||||| | |||| ||||||
Sbjct 1395 CGC---AAGCACAATCAGTGCTTCGACACTGTGCAGCCTGGCGAACCCCTGTTTATCGGG 1339
Query 1307 CAGGACTTCAACGTCGGGCATAT---GGCTAGCACCGTATACGTTCAGCGTGA--GTATG 1361
||||||||||||||| | || ||||| |||| |||| |||| || || ||
Sbjct 1338 ATGGACTTCAACGTCGGCAAGATGGCGGCTATCACC---CACGTCAAGCGAGACGGTTTG 1282
Query 1362 TCTGGCACGCGGTAGCCGAGCTGGTGGATATGTTCGACACCCCAGATGTGGTCAGG 1417
| | |||| | ||||||||||||| | |||||| || ||| || |||||
Sbjct 1281 CC--CCGGGCGGCTGACGAGCTGGTGGATGGCTACGACACGCCGGATATGATCAGG 1228
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 131403549580914
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |