Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09]
3,088,511 sequences; 2,785,377,831 total letters
Query= NC_022915.1
Length=40471
Score E
Sequences producing significant alignments: (Bits) Value
seq3085889 192 1e-44
>seq3085889
Length=3603
Score = 192 bits (212), Expect = 1e-44
Identities = 358/515 (70%), Gaps = 22/515 (4%)
Strand=Plus/Minus
Query 34752 TTGCCTTCCATTTCGTCTGCCGTTGGTTGGCTACCGACTTCGGGGAAAGCCTTGCGCAGA 34811
||||||||||| ||||| |||||||| || || || ||||| || ||||||||
Sbjct 1456 TTGCCTTCCATCTCGTCGGCCGTTGGCGCAGACCCAACCTCAGGGAATGCTTTGCGCAGG 1397
Query 34812 GCCTGTGCCTCGGCACACTTGGCGATCTGCCCATAAGGTCGCTTCTGCCACATGAGGTTG 34871
||||| ||||| || || ||||||| ||| || | | ||| || |||||| ||||
Sbjct 1396 GCCTGGGCCTCTGCGCATTTGGCGAGCTGGGCAAATGCTCGGCGCTTCCACATCGCGTTG 1337
Query 34872 GGGGCGATGCTTTTTTCTTTGCCACCCTTGACGGCGTAGTTCTCCTTCCAGAACTCGCTG 34931
|| || | | | | |||| | || || ||||||| || |||| |||| ||
Sbjct 1336 GGCGCCGCGGTGT---CCTTGCT--CGATGTCG-CGTAGTTTTCAAGCCAGCGCTCGTTG 1283
Query 34932 GCCGTGAACTTC----ACGATGTCGCCTGATGGCATGCGTCGTGAGACGGTCACGCGACA 34987
|||||| | ||| || | | || || | ||| | || ||| |||||||| ||
Sbjct 1282 GCCGTGTA-TTCGGCAACCAGGCCGT-TGCT--CATCTGCCGCTTGACCGTCACGCGGCA 1227
Query 34988 CCATTGCGGAAACGTAATCTCGACACCGCCGATGACTTCG--GT--CTTGTCAGGGCCGA 35043
||||| ||| |||| | ||||| |||| | ||||| || || | ||| ||
Sbjct 1226 CCATTCGGGATACGTGACTTCGACGCCGCTCAG--CTTCGCCGTTACTGG--AGGACCAT 1171
Query 35044 ACTCAGGCTCGGTGATGCCCGCGTATTCGCCCGTACGCGCTGCATCCGTGCGGTACAGAC 35103
| ||||||||| |||| || ||||| | ||| || || || || | |||||||||| |
Sbjct 1170 ATTCAGGCTCGCTGATTCCGGCGTACTGGCCGGTGCGTGCCGCTTGAATGCGGTACAGGC 1111
Query 35104 CGATTCCGGGCATCACCACGTCACGCATTTGTCCAGTCTTGCTGTCCCACATTGGCACGA 35163
|||| || ||||||||| ||| |||||| | ||||| || ||| || || ||||
Sbjct 1110 CGATGCCAGGCATCACCGTGTCCTGCATTTTTTTCGTCTTCGAGTTCCAGATCGGGACGA 1051
Query 35164 TGTGAACGGGCTTGCGCATCGGGTCAAGGCCCGCAGCCTTGCAGTAGCCCAGCACCATCT 35223
|||| || ||||| |||| ||||| ||| ||| |||| |||||| ||| |||||||
Sbjct 1050 TGTGCACCGGCTTCAGCATTGGGTCCAGGTGCGCGGCCTGGCAGTAAGCCAACACCATCA 991
Query 35224 TGATCGATTGGTGCGATGCGCCGGGGTAGAGGCTG 35258
|| || | | ||||||||||||||||||
Sbjct 990 CGACTGAGTTCTTTTCGGCGCCGGGGTAGAGGCTG 956
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 124640244920006
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |