Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09]
3,088,511 sequences; 2,785,377,831 total letters
Query= NC_023555.1
Length=43017
Score E
Sequences producing significant alignments: (Bits) Value
seq3088057 86.0 2e-12
>seq3088057
Length=7030
Score = 86.0 bits (94), Expect = 2e-12
Identities = 191/287 (67%), Gaps = 0/287 (0%)
Strand=Plus/Plus
Query 6200 CGGCAATTGGGATGGGTCGTTTAAATGGGCCTACACCAACAATCCGGCGTGGGTATGGTA 6259
||||| ||||| || | || ||| ||||||||||||||| || |||||||| | ||
Sbjct 5608 CGGCATCTGGGACGGCACCTTCAAAGAGGCCTACACCAACAACCCTGCGTGGGTGTTTTA 5667
Query 6260 CGACGTATTGACTCAACCGCGGTTCGGGCTTGGTAAGCGCGTTACGGCGGCCATGCTAGA 6319
||| | || || || | ||| || || | ||| | || | ||| | ||
Sbjct 5668 TGACCTGGTGCTGCACCCTTACTACGGCCTCGGCGATCGCATCGATGCCACGATGGTTGA 5727
Query 6320 TAAATGGGAGTTGTACCGCATCGCACAGCGCTGCGATCAGATGGTGCCGGATGGTGCCGG 6379
| ||| | | || |||||||| || |||||||||||||||||||||||| ||
Sbjct 5728 TCGCTGGTCGCTTTATCGCATCGCGCAATACTGCGATCAGATGGTGCCGGATGGAAAAGG 5787
Query 6380 TGGTGTTGAGCCGCGTTTCGAGTTCAACTGTTATTTGCAGGCGCAGGCCGATGCCTGGAC 6439
|| | |||||||| || | |||| || |||| ||||||||| |||| |
Sbjct 5788 CGGCATGGAGCCGCGCTTTACCTGCAACCTGTACCTGCAAAAGCAGGCCGAGGCCTACGC 5847
Query 6440 GGTGATCCGTGATATCGCGGCGGGATTTAACGGGCTGACGTATTGGG 6486
|||| | | ||| | || || ||| |||| ||| | || ||||
Sbjct 5848 GGTGCTGCAGGATCTGGCATCGATCTTTCACGGTCTGGCCTACTGGG 5894
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 132488637657778
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |