Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09]
3,088,511 sequences; 2,785,377,831 total letters
Query= NC_023557.1
Length=271084
Score E
Sequences producing significant alignments: (Bits) Value
seq2815131 105 1e-17
seq2955700 86.0 1e-11
>seq2815131
Length=243
Score = 105 bits (116), Expect = 1e-17
Identities = 165/236 (70%), Gaps = 0/236 (0%)
Strand=Plus/Plus
Query 45017 ACACTGGGTAGCGGTAACCACTTCGTTGAAATCTGTTTAGACGAAGAGCAACGCGTTTGG 45076
|| ||||||| ||| ||||||||||| || |||| | ||| | ||||| ||||| |||
Sbjct 1 ACGCTGGGTACCGGCAACCACTTCGTCGAGGTCTGCCTGGACCAGGAGCAGCGCGTGTGG 60
Query 45077 GTAATGCTTCATTCAGGTTCACGTGGTATCGGCAACACCATCGGTAAATACTTCATCGAG 45136
| ||||| || || ||||| ||||| | ||||| ||||||| | ||||||||||||
Sbjct 61 TTCATGCTGCACTCCGGTTCGCGTGGCGTAGGCAATGCCATCGGCACCTACTTCATCGAG 120
Query 45137 AAAGCCAAAGAAGAGATGAACCGTTTCTTCGTCCATTTAGTTGACCAAGATCTGGCGTAT 45196
||||| | || ||| ||| | | || | | ||||| || ||||| ||
Sbjct 121 CTGGCCAAGCAGGAAATGCGCCGCTGGATGATCAACCTGCCCGACCAGGACCTGGCCTAC 180
Query 45197 CTCCCAGAAGGCTCTCAGTATTACGATGACTACTTGCAAGCGGTGCAATGGGCACA 45252
|| || || ||| ||| | |||| ||||| || |||||| | ||||| ||
Sbjct 181 CTGCCCGAGGGCAGCCAGCACTACGGCGACTATGTGTTCGCGGTGGACTGGGCGCA 236
>seq2955700
Length=463
Score = 86.0 bits (94), Expect = 1e-11
Identities = 127/180 (71%), Gaps = 0/180 (0%)
Strand=Plus/Minus
Query 44621 CCTTTCATCTTCAAACACCTAGCCGTGATGCCTGATGTACACTGGGGAATGGGCGCGACC 44680
|| || |||||||| ||||| || |||||||| ||||| ||| ||| | ||| |||||
Sbjct 428 CCGTTTATCTTCAAGCACCTCGCGGTGATGCCGGATGTGCACCTGGGCAAGGGTTCGACC 369
Query 44681 ATTGGTTCGGTTATTGCGACTAAAGGTGCGATTATTCCTGCCGCAGTGGGTGTTGATATT 44740
|| || || || | || || |||||||| || || || ||||| || || ||
Sbjct 368 ATCGGCAGCGTAATCCCCACGGTGGGCGCGATTATCCCGGCGGCGGTGGGCGTGGACATC 309
Query 44741 GGTTGTGGGATGATTGCCCAACAAACCTCGCTGGTTGCTGCTGACCTGCCCGATAACCTC 44800
|| || |||||||||||| | ||| ||||| || || ||||||| ||||||
Sbjct 308 GGCTGCGGGATGATTGCCGCGCGCACCACGCTGACCGCCAGCGATTTGCCCGACAACCTC 249
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 833855904980640
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |