Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09] 3,088,511 sequences; 2,785,377,831 total letters Query= NC_023608.1 Length=42093 Score E Sequences producing significant alignments: (Bits) Value seq335145 82.4 2e-11 >seq335145 Length=573 Score = 82.4 bits (90), Expect = 2e-11 Identities = 117/165 (71%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 8004 GCAAGTTCATCTCCGTCATCTTCGGCCAGGGCGCTATCGGCTATGGCGAAGGCAATCCCG 8063 |||||| | ||||| ||||||||||||| ||| |||| || |||||||||| |||| Sbjct 367 GCAAGTATCTGTCCGTGTTCTTCGGCCAGGGTGCTTTCGGTTACGGCGAAGGCACTCCCA 426 Query 8064 AGATGCCGTTGGAATACGAGCGTGAAGCATCTCGCGCTAACGGCGGCGGCGTTGAAACCC 8123 || ||||| | || |||||| || || ||| |||||||||||| | || Sbjct 427 AGGTGCCGGTAGAGCTGGAGCGTAAACCAGGCGGCGGTAACGGCGGCGGTGCCGAGGTGT 486 Query 8124 TGTGGACTCGTAAGACCTGGTTGCTGCATCCGTTCGGCTACAGCT 8168 ||||| || ||||||| | || || || ||||| ||||| Sbjct 487 TGTGGGAGCGAAAGACCTACATCCTCCAGCCTGCCGGCTTCAGCT 531 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 129640281456010