Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09]
3,088,511 sequences; 2,785,377,831 total letters
Query= NC_023719.1
Length=497513
Score E
Sequences producing significant alignments: (Bits) Value
seq2851332 104 7e-17
>seq2851332
Length=271
Score = 104 bits (114), Expect = 7e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 188971 ATCGATGAAGTAGATAAAATTGCTAGAAAATCAGAAAGCACATCCATTACCCGAGATGTA 189030
||||| ||| | || || ||| | | || || || | | | || || ||||| ||||||
Sbjct 270 ATCGACGAAATCGACAAGATTTCGCGCAAGTCCGACAACCCGTCGATCACCCGCGATGTA 211
Query 189031 TCTGGCGAAGGAGTACAGCAAGCTTTATTAAAAATCATTGAAGGTACAGTTGCGAAAGTT 189090
|| || ||||| || ||||| ||| | || ||| | || ||||| || ||||| ||
Sbjct 210 TCGGGTGAAGGCGTGCAGCAGGCTCTGTTGAAACTGATCGAAGGCACGGTTGCTTCCGTA 151
Query 189091 CCTCCTCAAGGTGGTCGTAAACACCCTCACCAAGAAATGCTTGAAATAGATACAACTAAT 189150
|| ||||||||||| || || ||||| || || ||| | ||| | | ||||| ||
Sbjct 150 CCGCCTCAAGGTGGCCGCAAGCACCCGCAGCAGGAATTTCTTCAGGTTGATACGCGCAAC 91
Query 189151 ATCTTGTTTATTCTTGGTGGAGCGTTTGATGGTCTTGAAAACATTAT 189197
||| |||| || ||| || ||||| ||||| ||||| ||||
Sbjct 90 ATCCTGTTCATCTGTGGCGGTGCGTTCTCCGGTCTGGAAAAGGTTAT 44
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1528916042488128
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |