Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09] 3,088,511 sequences; 2,785,377,831 total letters Query= NC_023747.1 Length=59672 Score E Sequences producing significant alignments: (Bits) Value seq2955700 84.2 8e-12 >seq2955700 Length=463 Score = 84.2 bits (92), Expect = 8e-12 Identities = 96/129 (74%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 54029 GCGCTGATGCCCGATGCGCATTTCGGTAAGGGCAGCAGTGTCGGCACGGTGATCCCAACC 54088 ||| ||||||| |||| ||| | || ||||| | |||||| || ||||| || Sbjct 407 GCGGTGATGCCGGATGTGCACCTGGGCAAGGGTTCGACCATCGGCAGCGTAATCCCCACG 348 Query 54089 GAGGGCGCTGTGATCCCGGCGGCCGTCGGCGTCGATATTGGTTGCGGCATGATCGCGGCC 54148 | |||||| | ||||||||||| || ||||| || || || ||||| ||||| || || Sbjct 347 GTGGGCGCGATTATCCCGGCGGCGGTGGGCGTGGACATCGGCTGCGGGATGATTGCCGCG 288 Query 54149 CGCACCACG 54157 ||||||||| Sbjct 287 CGCACCACG 279 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 183829949930988