Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09]
3,088,511 sequences; 2,785,377,831 total letters
Query= NC_024369.2
Length=41569
Score E
Sequences producing significant alignments: (Bits) Value
seq3087627 138 3e-28
seq2951953 84.2 6e-12
>seq3087627
Length=5558
Score = 138 bits (152), Expect = 3e-28
Identities = 183/254 (72%), Gaps = 0/254 (0%)
Strand=Plus/Minus
Query 28451 GGAGAGCCTTGGTTCATTGCTAAGGATGTTGCTGATATTCTTGGTTACGTAAACACATCA 28510
||||||||||||||||| || |||||| | || || | || || ||| ||||| ||
Sbjct 765 GGAGAGCCTTGGTTCATCGCCAAGGATATCGCCGAAACCCTCGGCTACTCCAACACGTCG 706
Query 28511 AAAGCAGTTAACACTCACTGCAAAAACGTGGAAACCTGTCCTACCGAAATGGGAGGTCAG 28570
||||| | || |||||||||| || ||||| | |||||||||||||||||||
Sbjct 705 AAAGCGATCAATGTTCACTGCAAAGCGGTCAGTACCTGCCATACCGAAATGGGAGGTCAG 646
Query 28571 GTAAGAAGAGTTCAGATTATCTCTGAGCGTGATGTTTACCGTCTGGTGATGCGCTCAACT 28630
|| | ||| || || ||| ||||||| ||| | |||||||| |||||| || |
Sbjct 645 GTCCGCGCAGTGCAAATCATCCCTGAGCGCGATCTCTACCGTCTTGTGATGAAGTCCAAG 586
Query 28631 CTTCCAGAAGCGGAAAAATTTGAAGAATGGGTAGTAGGCGAAGTTCTTCCATCAATCCGA 28690
||||| | || || | || ||||| ||||| || ||| | || || || | || |||
Sbjct 585 CTTCCGGCTGCTGAGCAGTTCGAAGAGTGGGTGGTGGGCCAGGTGCTGCCGACCATTCGA 526
Query 28691 AAAACTGGCGCTTA 28704
|| || ||| ||||
Sbjct 525 AAGACCGGCTCTTA 512
>seq2951953
Length=451
Score = 84.2 bits (92), Expect = 6e-12
Identities = 97/131 (74%), Gaps = 0/131 (0%)
Strand=Plus/Minus
Query 38320 GATAAGCAAACCGGACAGCCAAAAGAGAAAACAGAGTGGCACCGAGTTACTTTGTTTGGG 38379
|| ||||| ||| ||| ||||||||||| ||||||||||| || | ||||| ||
Sbjct 399 GACAAGCAGACCAACGAGCGCAAAGAGAAAACCGAGTGGCACCGCGTGTCGTTGTTCGGC 340
Query 38380 AAGCTGGCTGAAGTTGCTGGCGAATACCTTCGAAAAGGATCTCATGTTTATATTGAAGGC 38439
||| | || || | ||||| || ||||| || ||||| || || || || || ||||||
Sbjct 339 AAGGTTGCAGAGATCGCTGGTGAGTACCTGCGCAAAGGTTCGCAGGTCTACATCGAAGGC 280
Query 38440 CAGCTTGAAAC 38450
|||| ||||
Sbjct 279 AAGCTGCAAAC 269
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 128024979887042
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |