Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09] 3,088,511 sequences; 2,785,377,831 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq213981 104 4e-17 >seq213981 Length=2920 Score = 104 bits (114), Expect = 4e-17 Identities = 117/157 (75%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 58385 TGGTGGTACTATATATCTAAAGGGATAGAATACTTAGATACAGTGTTTTTCATACTTAGG 58444 |||||||||| |||||||||||| || || || || || || |||||||| || || ||| Sbjct 1325 TGGTGGTACTTTATATCTAAAGGAATTGAGTATTTGGACACGGTGTTTTTTATCCTGAGG 1266 Query 58445 AAAAAGTTTAATCATGTTAGCTTTCTACACGTATATCATCATTTTACTATGTTTACTTTA 58504 || || || || || ||||| ||||| |||||||| | ||| ||||| || || Sbjct 1265 AAGAAAAACAACCAAGTCTCTTTTCTTCACGTGTATCATCACTGTACCATGTTCACCTTG 1206 Query 58505 GGATGGGTAGGTATTAAATGGTTTGCAGGAGGTCAGG 58541 | ||| | || ||||| ||| | ||||||| |||| Sbjct 1205 TGGTGGATCGGAATTAAGTGGGTCCCAGGAGGACAGG 1169 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 868533757140960