Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09] 3,088,511 sequences; 2,785,377,831 total letters Query= NC_025830.1 Length=120938 Score E Sequences producing significant alignments: (Bits) Value seq2574887 82.4 6e-11 >seq2574887 Length=177 Score = 82.4 bits (90), Expect = 6e-11 Identities = 62/72 (86%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 9582 TTTGGTGGCCCCTGCTGGACTTGAACCAGCGACCAAGCGATTATGAGTCACCTGCTCTAA 9641 |||||||| ||| | ||||| ||||| |||||||| ||||||||||| |||||||||| Sbjct 39 TTTGGTGGGCCCAGTAGGACTCGAACCTACGACCAAGGGATTATGAGTCCCCTGCTCTAA 98 Query 9642 CC-ACTGAGCTA 9652 || ||||||||| Sbjct 99 CCAACTGAGCTA 110 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 372314282235829