Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09] 3,088,511 sequences; 2,785,377,831 total letters Query= NC_026600.1 Length=66181 Score E Sequences producing significant alignments: (Bits) Value seq3084777 84.2 9e-12 >seq3084777 Length=3074 Score = 84.2 bits (92), Expect = 9e-12 Identities = 107/147 (73%), Gaps = 9/147 (6%) Strand=Plus/Plus Query 12975 GAAATCGAATCGATGATCGTGGATGGAAGAGTGGTGGAAGCAAATCCGGCGCGGCAGCTC 13034 ||| | ||| || || |||||||| | ||||||| ||||| || | ||||| || Sbjct 1367 GAAGTTGAAGCGGTGGTCGTGGATCGCAGAGTGGGCAAAGCAGGCACGCCTGGGCAGTTC 1426 Query 13035 CGGATGCCATACATGGAGGCG------GCCTGCCGGAAGCTGGACCTGGATGAAGCCCAG 13088 || ||||| || || ||||| |||| || ||||||||||| | |||||||| Sbjct 1427 AGGGTGCCAGACGTGCAGGCGTTGATTGCCTTCC---AGCTGGACCTGCACAAAGCCCAG 1483 Query 13089 GCCGTGCAGCGTGATTTTGTCCTTCAT 13115 ||||||||| ||||| ||||| |||| Sbjct 1484 GCCGTGCAGGGTGATCTTGTCGGTCAT 1510 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 203687468512082