Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09] 3,088,511 sequences; 2,785,377,831 total letters Query= NC_027994.1 Length=41632 Score E Sequences producing significant alignments: (Bits) Value seq274481 91.5 4e-14 >seq274481 Length=3169 Score = 91.5 bits (100), Expect = 4e-14 Identities = 136/192 (71%), Gaps = 6/192 (3%) Strand=Plus/Minus Query 573 CCTGCCGCCTGACTACATTAGCTCACTGACCGAGACTTACCCCGCGCAACTGATTAACGC 632 ||||||||| |||||||| || |||| ||| ||||||| |||| ||||| || Sbjct 1513 CCTGCCGCCGGACTACATACAGTCGCTGATGGAGTCTTACCCGCCGCAGCTGATCCTGGC 1454 Query 633 GTACCTGAACGGTGAGTTCGTTAACCTGACATCCGGCAGCGTGTATTATGCGTATGACCG 692 ||||| |||||| ||||||| ||||||||||| ||| | || | |||| ||| Sbjct 1453 CTACCTCAACGGTCAGTTCGTCAACCTGACATCGGGCTCGATCTACCACTCGTACGAC-- 1396 Query 693 TCGCAAGCAC---CGCAGCAAAGAGACAATTCAACCGGGCGATACACTGTACATCGGGCA 749 ||||||||| | || || || | || || ||||| | |||| |||||| Sbjct 1395 -CGCAAGCACAATCAGTGCTTCGACACTGTGCAGCCTGGCGAACCCCTGTTTATCGGGAT 1337 Query 750 GGACTTCAACGT 761 |||||||||||| Sbjct 1336 GGACTTCAACGT 1325 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 128219185991708