Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09]
3,088,511 sequences; 2,785,377,831 total letters
Query= NC_028672.1
Length=149732
Score E
Sequences producing significant alignments: (Bits) Value
seq3085140 105 6e-18
>seq3085140
Length=3208
Score = 105 bits (116), Expect = 6e-18
Identities = 201/296 (68%), Gaps = 0/296 (0%)
Strand=Plus/Plus
Query 16724 GCGATCGCATTAATGGTCAAGTCCCGGCGGGCCAAATCCTCTTCGATGGTCACATCTGGG 16783
|| || ||||| ||||||| ||| || || || || ||||| | || || || |||
Sbjct 1967 GCCATGGCATTGATGGTCAGGTCGCGACGAATCAGGTCTTCTTCCAGCGTGACCTCGGGG 2026
Query 16784 CTGAACATCACCTCGAAATCGTGGTATCCTGCGCCAGTTGAACGCTCGGTACGGGCCAGG 16843
||| | | |||| || ||| || |||| | || ||||| |||||||||
Sbjct 2027 CTGGCGTGAAACACGAAGCCGCCGTAACCCCTGCCACTCTTCCGTTCGGTGCGGGCCAGG 2086
Query 16844 GCGTACTCTTCCTTGGTCTCAGGATGCAGGTAAACTGGGAATGCGGCACCGACTTGCTCG 16903
||||| || || | | | || | |||| | || ||||| | || ||||| ||| |
Sbjct 2087 GCGTATTCATCGCCGTTTTTCGGGTCCAGGAACACGGGGAAGTCAGCGCCGACCGGCTTG 2146
Query 16904 AAGCCGAGTGCCATCATCTCTTCGTGGGTGGAGCCGACCACAACGTAGTCACGGTCTTTG 16963
||||| |||| |||||||||| ||||| |||||| || ||| ||| ||| ||
Sbjct 2147 AAGCCTTTGGCCAGCATCTCTTCGGTGGTGGCGCCGACGACGACGCGGTCGATGTCGGTG 2206
Query 16964 CTCTCAACACCCATCAGTTCATCGCGGACCGCGCCGCCGACCAGATAGATTTTCAT 17019
|| | |||| ||| ||| || |||||||||||||| |||||||||||
Sbjct 2207 ACCTTGATGCCCAGCAGGCGATCACGCACCGCGCCGCCGACTTTGTAGATTTTCAT 2262
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 460521384455520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |