Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09]
3,088,511 sequences; 2,785,377,831 total letters
Query= NC_028696.2
Length=41338
Score E
Sequences producing significant alignments: (Bits) Value
seq2317456 84.2 6e-12
seq144353 84.2 6e-12
>seq2317456
Length=139
Score = 84.2 bits (92), Expect = 6e-12
Identities = 88/116 (76%), Gaps = 0/116 (0%)
Strand=Plus/Minus
Query 39540 ATAGCCCGTCGCCGGCACCCATTCGTTCTTCAGACTCCTGAAGAAGCGCTCCATTGGGCT 39599
||||||| | ||| | |||||| | |||| || | || | ||||||||| ||
Sbjct 131 ATAGCCCACGGTCGGTATCCATTCTGTTTTCAAGCTGCGAAATACGCGCTCCATCGGTGC 72
Query 39600 GTTATCCCAGCAGTTTCCACGCCGACTCATACTCTGCCTGATCCGGTATCTCCACA 39655
|||||||||||||||||| || |||||||| ||||| | || ||||||| |||||
Sbjct 71 GTTATCCCAGCAGTTTCCTCGTCGACTCATGCTCTGGCGCATGCGGTATCGCCACA 16
Score = 84.2 bits (92), Expect = 6e-12
Identities = 88/116 (76%), Gaps = 0/116 (0%)
Strand=Plus/Minus
Query 16915 ATAGCCCGTCGCCGGCACCCATTCGTTCTTCAGACTCCTGAAGAAGCGCTCCATTGGGCT 16974
||||||| | ||| | |||||| | |||| || | || | ||||||||| ||
Sbjct 131 ATAGCCCACGGTCGGTATCCATTCTGTTTTCAAGCTGCGAAATACGCGCTCCATCGGTGC 72
Query 16975 GTTATCCCAGCAGTTTCCACGCCGACTCATACTCTGCCTGATCCGGTATCTCCACA 17030
|||||||||||||||||| || |||||||| ||||| | || ||||||| |||||
Sbjct 71 GTTATCCCAGCAGTTTCCTCGTCGACTCATGCTCTGGCGCATGCGGTATCGCCACA 16
>seq144353
Length=33745
Score = 84.2 bits (92), Expect = 6e-12
Identities = 88/116 (76%), Gaps = 0/116 (0%)
Strand=Plus/Plus
Query 16915 ATAGCCCGTCGCCGGCACCCATTCGTTCTTCAGACTCCTGAAGAAGCGCTCCATTGGGCT 16974
||||||| | ||| | |||||| | |||| || | || | ||||||||| ||
Sbjct 30584 ATAGCCCACGGTCGGTATCCATTCTGTTTTCAAGCTGCGAAATACGCGCTCCATCGGTGC 30643
Query 16975 GTTATCCCAGCAGTTTCCACGCCGACTCATACTCTGCCTGATCCGGTATCTCCACA 17030
|||||||||||||||||| || |||||||| ||||| | || ||||||| |||||
Sbjct 30644 GTTATCCCAGCAGTTTCCTCGTCGACTCATGCTCTGGCGCATGCGGTATCGCCACA 30699
Score = 84.2 bits (92), Expect = 6e-12
Identities = 88/116 (76%), Gaps = 0/116 (0%)
Strand=Plus/Plus
Query 39540 ATAGCCCGTCGCCGGCACCCATTCGTTCTTCAGACTCCTGAAGAAGCGCTCCATTGGGCT 39599
||||||| | ||| | |||||| | |||| || | || | ||||||||| ||
Sbjct 30584 ATAGCCCACGGTCGGTATCCATTCTGTTTTCAAGCTGCGAAATACGCGCTCCATCGGTGC 30643
Query 39600 GTTATCCCAGCAGTTTCCACGCCGACTCATACTCTGCCTGATCCGGTATCTCCACA 39655
|||||||||||||||||| || |||||||| ||||| | || ||||||| |||||
Sbjct 30644 GTTATCCCAGCAGTTTCCTCGTCGACTCATGCTCTGGCGCATGCGGTATCGCCACA 30699
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 127312890836600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |