Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09] 3,088,511 sequences; 2,785,377,831 total letters Query= NC_028832.1 Length=61511 Score E Sequences producing significant alignments: (Bits) Value seq2955700 84.2 8e-12 >seq2955700 Length=463 Score = 84.2 bits (92), Expect = 8e-12 Identities = 115/161 (71%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 54584 ACCGCCAGCATGCCGTTCGTGTATCCGCACGTCGCACTCATGCCCGACGCACATTTCGGC 54643 ||||||| |||||||| | | |||| |||| | ||||| || | || | ||| Sbjct 440 ACCGCCAAGATGCCGTTTATCTTCAAGCACCTCGCGGTGATGCCGGATGTGCACCTGGGC 381 Query 54644 AAAGGCAGCTCGGTCGGCACAGTCATCCCCACCCAAGGCGCCGTCATCCCGGCCGCCGTC 54703 || || | |||||| || |||||||| ||||| | |||||||| || || Sbjct 380 AAGGGTTCGACCATCGGCAGCGTAATCCCCACGGTGGGCGCGATTATCCCGGCGGCGGTG 321 Query 54704 GGCGTCGACATCGGCTGCGGCATGATCGCAGCCCGCACCAC 54744 ||||| |||||||||||||| ||||| || || |||||||| Sbjct 320 GGCGTGGACATCGGCTGCGGGATGATTGCCGCGCGCACCAC 280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 189498918605286