Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09]
3,088,511 sequences; 2,785,377,831 total letters
Query= NC_028890.1
Length=162486
Score E
Sequences producing significant alignments: (Bits) Value
seq240294 93.3 4e-14
seq501696 84.2 2e-11
>seq240294
Length=15375
Score = 93.3 bits (102), Expect = 4e-14
Identities = 75/91 (82%), Gaps = 0/91 (0%)
Strand=Plus/Plus
Query 27072 GTCCCTCCAATACGCCTTCTTAGCTCAGTTGGTAGAGCGATTGACTTGTAATCAATAGGT 27131
||||| | || ||||| ||||||||||||||||||| | ||||||||||||| |||||
Sbjct 3674 GTCCCCCTAACACGCCGGTTTAGCTCAGTTGGTAGAGCAACTGACTTGTAATCAGTAGGT 3733
Query 27132 CGTGGGTTCGAATCCTACAGTCGGCACCATA 27162
| |||||||| |||| | ||||||||||
Sbjct 3734 CCCGGGTTCGACTCCTGGTGCCGGCACCATA 3764
>seq501696
Length=102
Score = 84.2 bits (92), Expect = 2e-11
Identities = 61/71 (86%), Gaps = 0/71 (0%)
Strand=Plus/Minus
Query 27092 TAGCTCAGTTGGTAGAGCGATTGACTTGTAATCAATAGGTCGTGGGTTCGAATCCTACAG 27151
|||||||||||||||||| | ||||||||||||| |||||| |||||||| |||| |
Sbjct 71 TAGCTCAGTTGGTAGAGCAACTGACTTGTAATCAGTAGGTCCCGGGTTCGACTCCTGGTG 12
Query 27152 TCGGCACCATA 27162
||||||||||
Sbjct 11 CCGGCACCATA 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499758549683760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |