Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09] 3,088,511 sequences; 2,785,377,831 total letters Query= NC_028896.1 Length=32675 Score E Sequences producing significant alignments: (Bits) Value seq3088503 379 4e-101 seq3088488 352 6e-93 seq2959876 147 4e-31 seq3084702 138 2e-28 seq3063309 104 5e-18 >seq3088503 Length=21467 Score = 379 bits (420), Expect = 4e-101 Identities = 1036/1558 (66%), Gaps = 49/1558 (3%) Strand=Plus/Plus Query 19556 CTGGAAGCGCGGCTGACCCAGCTCATCATCAA--ACCGCAGAAAACCGGCGGTGACTTCA 19613 |||||||||||| || ||||| ||| |||| | ||| | | |||||| ||||||| Sbjct 9960 CTGGAAGCGCGGTTGGTGCAGCTGATCCTCAAGGAAAGCA--AGAGCGGCGGGGACTTCA 10017 Query 19614 AGGAAATTGACCTGCTGGGACGTCAGATTGAACGACTGGCACGGGTCAACCGCTACAGTC 19673 |||||||||| |||||| || || | ||||| | ||| | | | |||| || Sbjct 10018 AGGAAATTGATCTGCTGCACCGCCAATTGGAACGCCAGGCCAGAATTCAGCGCTT---TC 10074 Query 19674 AGACCGGC---AACGAGGCAGACCTTAATCCGAACGTCGCTAACCGCAACAAAGG-CGGG 19729 || |||| | ||| | || || || || ||| | ||||| |||||| | || | | Sbjct 10075 AGGGCGGCGGTACCGAAACCGAGCTCAACCCTAACCTGGCTAAACGCAACGAGGGTCCGA 10134 Query 19730 CGTCGCAAACCGAAAAAGAATTTTTTCAGTGACGAGGCCATCGAAAAGCTG-GAGCAGAT 19788 | | ||| |||| || | |||| || ||| ||||| | || | | || Sbjct 10135 AGAAAAAGACCCCAAAA-AACGATATCAGCGAAGAGCAGATCGAGCTGTTGCGTGAAGCG 10193 Query 19789 TTTCTTTGAGCAGTCTTTCGAATATCAGTTGCACTGGTATCGCGCCGGGCTTG--AGCAC 19846 ||| | || | |||||| || ||| ||||||| ||||||| | | || Sbjct 10194 TTTATC-GACGGCTGTTTCGACTACCAGAAAGACTGGTA-----CCGGGCTGGCAATCAA 10247 Query 19847 CGCATCCGCGATATCCTGAAATCCCGCCAGATTGGCGCGACGTTTTATTTTTCCCGCGAG 19906 || | |||| ||||| ||| ||| ||||| |||||||| | ||| ||| |||||||| Sbjct 10248 CGGACTCGCGTCATCCTCAAAAGCCGGCAGATCGGCGCGACCTATTACTTTGCCCGCGAG 10307 Query 19907 GCGCTGCTGCGCGCCCTGAAAACCGGTCATAACCAGATTTTTCTGTCGGCCAGTAAAACG 19966 ||| | || || ||| ||||||| | || ||||| || ||||| || |||| Sbjct 10308 GCGTTTCTTGATGCGCTGGAAACCGGGCGCAATCAGATCTTCCTGTCCGCATCGAAAAAC 10367 Query 19967 CAGGCGTATGTGTTCCGCGAATACATCATCGCCTTTGCCCGGCTGGTT---GACGTTGAC 20023 || || ||| |||| |||| |||||| || |||||||| |||| | || || Sbjct 10368 CAAGCCTATCTGTTTCGCGGGTACATCCAGGCATTTGCCCGTGAGGTTATCGGTGTCGAG 10427 Query 20024 CTGACCGGTGACCCGATTGTCCTGGGCAATAACGGCGCAAAACTGATTTTTCTCGGCACC 20083 ||||| || || || || || || | |||||||| | ||| |||| ||||| ||| Sbjct 10428 CTGACGGGGGATCCCATCGTATTGCCC---AACGGCGCCGAGCTGTTTTTCCTCGGTACC 10484 Query 20084 AACTCCAACACCGCACAGAGCCATAACGGCGACCTGTACGTCGACGAGATTTTCTGGATC 20143 || | ||||| ||| || | ||||| | | ||| ||||||| | ||||||| Sbjct 10485 AATGCGCGTACCGCCCAGGGCTACCACGGCAATTTCTACTTCGACGAATTCTTCTGGACG 10544 Query 20144 CCGAATTTTCAGGTACTGCGTAAGGTGGCATCAGGTATGGCCTCACAGAGTCACCTGCGC 20203 || ||| ||| |||| ||||| || || || |||||| || | | |||| Sbjct 10545 TTCAAGTTTGAGGAACTGAACAAGGTCGCTTCGGGCATGGCCATGCACAAGAAGTGGCGC 10604 Query 20204 TCGACCTATTTCTCCACCCCGTCCACGCTGGCGCACGACGCCTACCCGTTCTGGTCGGGT 20263 ||||| ||||| || ||||||| |||| || || |||||| | |||||| | || Sbjct 10605 AAAACCTACTTCTCGACGCCGTCCAGCATGGCCCATGAGGCCTACACCTTCTGGACCGGC 10664 Query 20264 GAACTGTTCAACCGGGGACGCGCCAGCGCCGCCGAACGCGTGGAAATCGACGTCAGTCAT 20323 || | |||||| ||| ||||||| ||| ||| | | ||||||| || Sbjct 10665 GAGCGCTTCAACAAGGG-TAAGCCAGCGGCGC--AACACACCAAGGTCGACGTTTCCCAC 10721 Query 20324 AACGCCCTTGCCGGAGGTCTTCTCTGTGCGGACGGCCAGTGGCGGCAGATTGTCACCATT 20383 || || || | |||| | |||| | |||||||||||| |||||||| Sbjct 10722 GGGGCGCTCCAACAGGGGCGGTTCTGCGAGGACCGGTTGTGGCGGCAGATCGTCACCATC 10781 Query 20384 GAGGACGCCCTGAAAGGCGGCTGCACGCTGTTCGACATTGAGCAGCTCAAACGTGAAAAC 20443 |||||| | | |||||||| ||||||||||||||| || | || || || Sbjct 10782 CTGGACGCAGAGCACGGCGGCTGTGATCTGTTCGACATTGAGGAGTTGCGTCGGGAGTAC 10841 Query 20444 AGCGCCGACGATTTTAAAAACCTGTTCATGTGTGAATTTGTTGACGACAAGGCGTCGG-- 20501 ||| | || | || |||||||| |||||||| |||||||||| | || | | | Sbjct 10842 AGCCCTGAGGCGTTCGCCAACCTGTTGATGTGTGAGTTTGTTGACG--ATGGAGCCAGCA 10899 Query 20502 TGTTCCCGTTCGAGGAGCTGCAACGTTGCATGGTCGACACGCTGGAAGAATGG---GAAG 20558 | || ||||| | | |||||| | ||||||||||||| || |||||| || | Sbjct 10900 TCTTTCCGTTGGCGTTGCTGCAGAGCTGCATGGTCGACAGTTGGGTTGAATGGGCAGAGG 10959 Query 20559 ACTATGCGCCGTTTGCCGCAAATCCGTTCGGCTCCCGCCCGGTATGGATTGGTTACGACC 20618 |||| ||| || ||| |||||||| ||| | ||||||||| || ||||||| Sbjct 10960 ACTACAAGCCATTCGCCATGCGGCCGTTCGGTGACCGTCAGGTATGGATCGGCTACGACC 11019 Query 20619 CGTC--ACACCGTGGCGACAGCGCCGGATGCGTGGTACTGGCACCGCCGGTGGTGGCCGG 20676 | | | ||| || || || |||| ||||| | || |||||| |||| | || Sbjct 11020 CAGCGGAAACC--GGTGATTGCTCCGGGCTGGTGGTGGTTGCGCCGCCGCTGGTACCGGG 11077 Query 20677 TGGCAAATTCAGAATACTTGAGCGTCACCAGTGGAAAGGCATGGACTTTGCCACCCAGGC 20736 ||||||||| | | || ||||| ||||| | |||||||||||||| ||||||| Sbjct 11078 CGGCAAATTCCGCGTCCTGGAGCGGCACCAATTCCGGGGCATGGACTTTGCGGCCCAGGC 11137 Query 20737 GGAATCCATCCGCAAACTCACCGAAAAATATAACGTTGAATACATCGGGATTGATGCCAC 20796 || || ||| || || ||| || || || ||||||||||||| ||| Sbjct 11138 GGCATTTATCAAAAACGTCTGCGACCGCTACTGGGTGACCTATATCGGGATTGATGTCAC 11197 Query 20797 CGGCCTCGGTGTCGGCGTGTTCCAGCTCGTGCGCTCGTTCTATCCCGCCGCGCGCGATAT 20856 ||| || ||| ||||||| ||||| |||||| ||||| || || | | | | Sbjct 11198 CGGGCTGGGTAGCGGCGTGGCGCAGCTGGTGCGCCAGTTCTTCCCGGCTGTGACCACCTT 11257 Query 20857 CCGCTACACGCCGGAAATGAAAAC-CGCAATGGTGCTCAAGGCAAAAGACGTTATCCGCC 20915 | |||| |||| ||| | ||||| ||| ||||||| ||||| | ||||| |||| Sbjct 11258 CAGCTATTCGCCCGAAGTCAAAACACGC-CTGGTGCTGAAGGCCTATGACGTGATCCATA 11316 Query 20916 GTGGCTGTCTGGAATATGACGTCAGCGCCACCGACATCAC-CAGCTCGTTTATGGCTATC 20974 ||| | ||||| | |||| | | |||||||| | ||| ||| | ||||| ||| Sbjct 11317 ACGGCCGGCTGGAGTTCGACGCCGGGTGGACCGACATGGCGCAG-TCGATGATGGCGATC 11375 Query 20975 CGCAAGACCATGACCAGCA-GCGGACGCAGCGCCACCTATGAGGCCAGCCGCAGCGAGGA 21033 |||||||| | ||| ||| |||| ||| |||||| || | |||| ||| | Sbjct 11376 CGCAAGACGGTCACC-GCAGGCGGTCGCCAGTACACCTACACCGCAGGGCGCAACGACAA 11434 Query 21034 AGCCAGCCACGCCGATCTCGCCTGGGCGACTA-TGCACGCCCTGTTAAATGAGCCACT 21090 || |||| ||||| || ||||||||| ||| | ||||| || ||| || || || Sbjct 11435 CACCGGCCATGCCGACCTGGCCTGGGCG-CTATTTCACGCATTGCAAAACGAACCGCT 11491 Score = 188 bits (208), Expect = 1e-43 Identities = 221/299 (74%), Gaps = 0/299 (0%) Strand=Plus/Plus Query 17322 GACTCGTAGTTCTCCACGCGGTCGAGTTTCGGGTTTTCCTCAATCACGCGGCGATGGCTG 17381 ||||||||||| || | |||||| | || | || || | | |||||| ||||| Sbjct 7813 GACTCGTAGTTTTCGATGCGGTCACGCTTGGCATTGTCGACGACGGTGCGGCGGCGGCTG 7872 Query 17382 TCATCCATGTAGTAGATGGACAGGTTTTCCAGCTTCGTGATGAGCATCGCATCCGCCGGG 17441 | ||| ||||||| ||||||||||||||||| |||| |||| | | || |||| Sbjct 7873 CCTTCCTGCCAGTAGATCGACAGGTTTTCCAGCTTGGTGACCAGCAACCCGCGCGGCGGG 7932 Query 17442 AAGTACGGGACGCGTACCGCTGGCAGGTTGCCGATGCGTTTCTGGCTGATGATGACGTCA 17501 ||||| || ||||| || ||||||| ||||| | ||| || || ||| ||| || || Sbjct 7933 AAGTAAGGCACGCGCACGGCTGGCAAATTGCCCAAGCGCTTTTGACTGGTGACGATATCG 7992 Query 17502 GCGGCCAGCATTTCGCTGTTGTCCTGCTCCTTGTTGACGATGGGAAAATACTTGTCCGCC 17561 |||||||||||||| | | | || ||||||| ||| || ||||||||||| ||| Sbjct 7993 GCGGCCAGCATTTCAGTCGGCGCGTTGTCTTTGTTGATGATCGGGAAATACTTGTCGGCC 8052 Query 17562 AGTAGCTGACGTCCCACAATCACCACAAGGTCAGGGTCTTCCTGATACCACGGCTCAAT 17620 || || || || || |||||||| || |||||||||||||| ||||||||| |||| Sbjct 8053 AGCAGTTGGCGACCGCAGATCACCACCAGATCAGGGTCTTCCTGGTACCACGGCGCAAT 8111 Score = 107 bits (118), Expect = 4e-19 Identities = 221/322 (69%), Gaps = 10/322 (3%) Strand=Plus/Plus Query 21622 TTTCACCTGCTGGAGCCGGATATCAATCAGGAGCTGTACGGCCTGCCGGAATATCTCAGC 21681 ||||| |||| || ||||| | | |||||| | || ||| ||||||| | | || Sbjct 12008 TTTCATCTGCGAGAAGCGGATTTGCACCAGGAGATTTATGGCTTGCCGGAGTGGATTAGT 12067 Query 21682 GCCCTTAACTCTGCCTGGCTGAATGAGTCGGCCACGCTGTTCCGCCGCAAGTATTACGAA 21741 ||| | | || || | ||| || || ||||||||| |||||||||||||||| ||||| Sbjct 12068 GCCTTGCAGTCGGCGTTGCTCAACGAATCGGCCACGTTGTTCCGCCGCAAGTACTACGAG 12127 Query 21742 AACGGCGCTCATGCCGGATACATCATGTATGTCACCGATGCCGTGCAGGATCGCAACGAT 21801 || ||| ||| ||||| | ||| | || | |||||||||| ||| | | |||| Sbjct 12128 AATGGCAGTCACGCCGGCTTCATTCTCTACATGACCGATGCCGCACAGACTGAAACCGAT 12187 Query 21802 ATCGAAATGCTTCGCGAAAACATGGTTAAG---TCGAAAGGCCGCAACAACTTTAAAAAC 21858 |||| | |||| ||| || | | ||| || || || | ||| ||| ||| Sbjct 12188 ATCG--ACGCTTTGCGCAAGGCT-CTCAAGGACTCCAAGGGGCCAGGCAATTTTCGCAAC 12244 Query 21859 CTGTTTCTCTATGC-CCCACAGGGGA-AAGCCGACGGCATTAAAATTATCCCCCTCAGTG 21916 ||||| | ||| | ||||| || | ||| ||||| || | | ||||| |||||| Sbjct 12245 TTGTTTGTGTATTCGCCCACCGGCAAGAAG--GACGGGATACAGCTGATCCCGGTCAGTG 12302 Query 21917 AAGTGGCGACGAAGGACGATTT 21938 | |||||| | ||||| || || Sbjct 12303 AGGTGGCGGCCAAGGATGAATT 12324 >seq3088488 Length=17142 Score = 352 bits (390), Expect = 6e-93 Identities = 782/1158 (68%), Gaps = 50/1158 (4%) Strand=Plus/Plus Query 5583 TCGGTAATACGCTGGCGCAGGGTCAGGTTTTCGAGAGGAGGCACCGGGGTATAGTCATAG 5642 ||||| || |||||||| | ||| |||| ||| || || ||||| ||||| ||||| || Sbjct 15499 TCGGTGATTCGCTGGCGGAAGGTGAGGTCTTCAAGTGGCGGCACGGGGGTGTAGTCGTAA 15558 Query 5643 TCGATATACAGTTTTCCGGCCTTGAGGGTTTCCGCATCGTTGGATTCTTCGCTGAACCAG 5702 || | | || || |||||||||||||| || |||| || || | |||| Sbjct 15559 TCAAGCCAGAGCTTGCCGGCCTTGAGGGTGTCTTTGGTGTTGATGTCGTCCGGGTTCCAG 15618 Query 5703 CAGGTCGCATCCACGATATAGCCGTTTGTTTTCAGCTCACGGAATTTGGCATTGATGCCG 5762 || | | | | | ||||| | | ||||| ||| || | ||||| | | ||| Sbjct 15619 CAACTGCCGCCGATCAGGTAGCCCTGGGATTTCAACTCGCGCATCTTGGCGCTTACGCCT 15678 Query 5763 TCAACGATGTCGCGAATCAGCGTTGCGGTGATGGGCTTGTCCACCGCCCACATATGCGCC 5822 || || | |||||| | ||| | ||| || || ||| || |||||||| ||||| Sbjct 15679 TCGACCAGGTCGCGTACCAGGGAGGCGTGCATAGGGCGGTCAACTGCCCACATGTGCGCT 15738 Query 5823 TCAGCCATCGTGTCGGCCAGCACCTGCGCGGTGCGGGTGTAGTTTTCAAAGAGGAACAGC 5882 || |||| ||||| || || | |||||||||||||||||||||||| ||| ||||| | Sbjct 15739 TCGCCCATGGTGTCCGCGAGGATCTGCGCGGTGCGGGTGTAGTTTTCGAAGGCGAACAAC 15798 Query 5883 GGGTCATCAGAGCAGGTACGGTTACCCCAGAATCGGAAACCGTCGCGGCGAATCAGCGTA 5942 ||||||||| |||||| ||| |||||||||| || ||||||| | | ||||| || Sbjct 15799 GGGTCATCACTGCAGGTGCGGCTACCCCAGAAGCGAAAACCGTTGGCGTTGATCAGGGTG 15858 Query 5943 GTGACG-CCTGACTCGTTAAGCAGGTCAGCATCGGTGCCGGACTCCTGCAAATCCCAGAA 6001 |||||| | | || ||| || || || |||||| | | | |||| ||||||||| Sbjct 15859 GTGACGTCGTTGCT-GTTGAGGTAGTTGGCGTCGGTGGCTGGGTTTTGCAGATCCCAGAA 15917 Query 6002 TACAGATGCGCTGATGCCGGTAACACCGTTTACCCCGACGTTGGACAGCGTTTTATGCCA 6061 || |||||||| ||||| || || | || | ||||||||||| ||||||||||| Sbjct 15918 CACGTCGGCGCTGATACCGGTCACGCCACTCACGGCCACGTTGGACAGGGTTTTATGCCA 15977 Query 6062 GCCCTGCTCCTGGTCGATTTTAGCGCGCAGACCCAGCGCACGGGCGGTGGCATACGCGGT 6121 ||| ||| |||||||| || ||||| || || || || ||||| ||| | ||| | Sbjct 15978 ACCCGTCTCTTGGTCGATCTTGGCGCGAAGGCCGAGGGCGCGGGCCACGGCCGAAGCGCT 16037 Query 6122 GGCGGTGGTACTGTTGACCGTATCCCATGCGAGGAAATCCGGCCAGATGACCATCAGCTC 6181 |||||| | || |||| || ||||| ||||| |||||||| || ||||||| || Sbjct 16038 GGCGGTCTTGTTGGTGACAGTGTCCCAGTTCAGGAAGTCCGGCCAAATCACCATCATTTC 16097 Query 6182 ACGCTGGCTGAAATTCTGGCGGTAGGCTTTCACCTCGGAAATGGTTTTACAGCCCCATGC 6241 || | ||| |||| |||||| || ||||| ||||||| ||| ||| || Sbjct 16098 GCGGGCACCGAAGTTCTCGCGGTACGCCACTACCTCTTCCTTGGTTTTGCAGTTCCAGGC 16157 Query 6242 GCTGATATACCCGAAAGCGCGCAACT-TCTGAC----ACACTGATGCCAGT-GCAACTGC 6295 ||| | || | || ||||||| | | || | | | || | | || || |||| Sbjct 16158 GCTTACGTATGCAAAGGCGCGCAGGTCTTTGGCGATGGCGCCGAGGGCGGTGGCTACTGG 16217 Query 6296 CACCTCTTTGGTGTCCAGTCCCGGTACGCCGAGAATACGCGGTTTAA----CACCGGTTA 6351 || |||| || || || ||||| || |||||||| | | ||| || Sbjct 16218 CA------AACTGTCGAGGCCTGGCACGCCAAGGATACGCGGAGTCATGCCCACGCGT-- 16269 Query 6352 CCGACTCCGCCGCCAGCAGGGCTTTCAGTCCGGTGTACTGACCGTTTTCGTCGGTGGTGC 6411 || | || || ||||| ||||||| |||||||| |||||| || |||| || Sbjct 16270 --GATTTGGCTGCGAGCAGAGCTTTCATGCCGGTGTATTGACCG-----GTTGGTGTTG- 16321 Query 6412 CGATGATATTGGAAACGGTCTGCGCGAGTTTCGT-TTCCTCGTCGTCGCCGGTGCCGTCT 6470 || | || || | ||| |||| || ||| | ||| | | ||| ||| Sbjct 16322 ------TACCGCCAA---TCAGGGCG---CTCGTAGTCGTCG-CTTCGTCAGCGCCTTCT 16368 Query 6471 TCCACACG---CACAACAACGGTGACCGGTTTTGACTGGTCGGCGATGGCCTGCAACGCT 6527 | || || ||| | ||| || | || || | ||||||||||||| | ||| | ||| Sbjct 16369 TTGACCCGTACCACGATAAC-GTAA--GGCTTGGTCTGGTCGGCGATGCCTTGC-AGGCT 16424 Query 6528 -GCCGCCAGCGTGCCTTTTTTACCGGCCTTTGCAATTGCGCTCTGCACATTGGTAATCAG 6586 || ||||| ||||| || |||||||| | | ||| | ||||| ||||| || || Sbjct 16425 GGCAGCCAGGGTGCCCTTGACGCCGGCCTTGCCGACGGCGGTTTGCACGTTGGTGATGAG 16484 Query 6587 CACCGGTTTATTGAGGGGGAAGATTTCCGCATCCGCATCGCTGGCCGTGCAGACCAAGCC 6646 || || | | || ||||| | | |||||||| || ||||| |||| ||| Sbjct 16485 GACTGGAGTGTCCAGAGGGAAAACGAGTGGGTCCGCATCTTCAGCGGTGCAAACCATGCC 16544 Query 6647 GACAATGGCAGTGGATACGGTGGAAATGACGCGGGTGCCGTCGTTAATCTCCAGCACCTG 6706 || | || |||| | ||| |||| ||||||||||||||| | || | ||| | Sbjct 16545 GATGACTGCGGTGGGAATAGTGCGAATGGGGCGGGTGCCGTCGTTGAGTTCGATGACCCG 16604 Query 6707 CACGCCGTGATGATAGTC 6724 ||||||||| |||| || Sbjct 16605 CACGCCGTGGAGATAATC 16622 >seq2959876 Length=477 Score = 147 bits (162), Expect = 4e-31 Identities = 252/365 (69%), Gaps = 12/365 (3%) Strand=Plus/Plus Query 10614 CGGCTTGCAGGTTTGGCATCAGCAATCAGCCGTTCCATTTCCTGATACATTGCCTCTGTG 10673 ||||| | || ||||| ||| |||||||||| |||| |||||||||||| |||| ||| Sbjct 2 CGGCTGACGGGCTTGGCGTCATCAATCAGCCGCTCCAGCTCCTGATACATTTCCTCAGTG 61 Query 10674 ATACCGCTTTCCAGTACACCAATATCAAGCCGGAAGGTGCCTGG--------CGGGTCAC 10725 |||||| | |||| || || | | | | ||||||||||| |||| | | Sbjct 62 ATACCGGTGTCCAACACCCCGACCTTTAACGCAAAGGTGCCTGGGGTCCCTTCGGGCCTC 121 Query 10726 -TGTTTTCCCACCACTCCGTCACGTTAATGAGATAGCCGAGCGGCTCCACCACACGCCGG 10784 |||| ||||||| | | | || || ||||| || ||||| |||||||| || Sbjct 122 ATGTTGA---ACCACTCGATAATCTCGATCAGGTAGCCCAGAGGCTCTACCACACGGCGT 178 Query 10785 ATTGCGCCGATAGTGCCTTTATGACAGTGGATGAAATAGGCATCGCGGATAACGGCACGT 10844 | |||||||| ||||| || || || ||| |||| | | ||| |||| ||| Sbjct 179 AACGCGCCGATGGTGCCCTTGTGGGCATGTATGTAATAAGAGGCCTTGATGGCGGCGCGT 238 Query 10845 TTGGTCGCTTCCGGCCACTTTTCATCCCACCTGTCGACCGAAAACGCCCACGCCAGCCAC 10904 |||||||| || | ||| | |||||| | || ||||| | ||||| ||||| | Sbjct 239 TTGGTCGCCTCGGTCCATCGGTAATCCCAGCGATCCACCGACCATGCCCATGCCAGATGC 298 Query 10905 GGCAGCAGATTTGCCGGGCAGGTGTCCGGGTTCCACAGTTCACGAATCCTGACCGGCGTT 10964 ||||||| || | |||||||||| || | ||| | || || |||| | ||| |||| Sbjct 299 GGCAGCAAATGTACCGGGCAGGTATCAGCGTTGTAGAGGTCGCGAAGCGGGACAATCGTT 358 Query 10965 TTTTC 10969 || || Sbjct 359 TTCTC 363 >seq3084702 Length=3045 Score = 138 bits (152), Expect = 2e-28 Identities = 251/367 (68%), Gaps = 8/367 (2%) Strand=Plus/Plus Query 10610 GTGGCGGCTTGCAGGTTTGGCATCAGCAATCAGCCGTTCCATTTCCTGATACATTGCCTC 10669 |||||||||| |||| ||||| ||| | | |||||| |||| ||||||||||| | || Sbjct 2566 GTGGCGGCTTACAGGCTTGGCGTCATCGACCAGCCGCTCCAGCTCCTGATACATCTCTTC 2625 Query 10670 TGTGATACCGCTTTCCAGTACACCAATATCAAGCCGGAAGGTGCCTGGCG-------GGT 10722 ||||||||| || || |||| | | | || || ||||||| || Sbjct 2626 GGTGATACCGGAATCACTCACGCCAACCTTCAACGCAAATGTCCCTGGCGTGCCCTCGGG 2685 Query 10723 CACTGTTTTCCCACCACTCCGTCACGTTAATGAGATAGCCGAGCGGCTCCACCACACGCC 10782 ||| | || ||||||| | | | ||| || ||||| || ||||| |||||||| | Sbjct 2686 CACAGCGTTAA-ACCACTCGATGATTTCAATCAGGTAGCCCAGAGGCTCAACCACACGAC 2744 Query 10783 GGATTGCGCCGATAGTGCCTTTATGACAGTGGATGAAATAGGCATCGCGGATAACGGCAC 10842 | | ||||||||||| || || || |||||| |||| | | ||| |||||| Sbjct 2745 GCAAGGCGCCGATAGTTCCCTTGTGGGCATGGATGTAATAAGAGGCCTTGATGGCGGCAC 2804 Query 10843 GTTTGGTCGCTTCCGGCCACTTTTCATCCCACCTGTCGACCGAAAACGCCCACGCCAGCC 10902 | |||||||| || | ||| | |||||| | || ||||| | ||||| ||||| Sbjct 2805 GCTTGGTCGCCTCTGTCCATCGGTAATCCCAGCGATCCACCGACCAAGCCCAGGCCAGAT 2864 Query 10903 ACGGCAGCAGATTTGCCGGGCAGGTGTCCGGGTTCCACAGTTCACGAATCCTGACCGGCG 10962 |||||||| || |||||||||| || | ||| | || || |||| | ||| || Sbjct 2865 GCGGCAGCAAATGCACCGGGCAGGTATCAGCGTTGTAGAGGTCGCGAAGCGGGACAATCG 2924 Query 10963 TTTTTTC 10969 |||| || Sbjct 2925 TTTTCTC 2931 >seq3063309 Length=1409 Score = 104 bits (114), Expect = 5e-18 Identities = 204/296 (69%), Gaps = 8/296 (3%) Strand=Plus/Plus Query 19851 TCCGCGATATCCTGAAATCCCGCCAGATTGGCGCGACGTTTTATTTTTCCCGCGAGGCGC 19910 ||||| | ||||||||| ||||||| | ||| ||||| || || || |||| ||| Sbjct 1 TCCGCAACATCCTGAAAAGCCGCCAGGTGGGCCTGACGTACTACTTCGCCGGCGAAGCGT 60 Query 19911 TGCTGCGCGCCCTGAAAACCGGTCATAACCAGATTTTTCTGTCGGCCAGTAAAACGCAGG 19970 | || |||| || ||||| | |||||| | || ||||||||||| ||||| Sbjct 61 TCATGGACGCCGTGCTGACCGGCGACAACCAGGTGTTCCTGTCGGCCAGCCGCTCGCAGT 120 Query 19971 CGTATGTGTTCCGCGAATACATCATCGCCTTTGCCCGGC--TGGTT-GACGTTGACCTGA 20027 || | | |||||| ||||||||| ||||| || ||||| ||| | || |||| Sbjct 121 CGGAAATTTTCCGCAGTTACATCATCCAGTTTGCAAAGCAGTGGTTCGACATCGAGCTGA 180 Query 20028 CCGGTGACCCGATTGTCCTGGGCAATAACGGCGCAAAACTGATTTTTCTCGGC-ACCAAC 20086 |||| |||||| || | || |||||||| | ||| ||||| | | ||||| Sbjct 181 CCGGCAACCCGA---TCACGCTCAGCAACGGCGCCGAGCTG-CGTTTCTTGTCGACCAAT 236 Query 20087 TCCAACACCGCACAGAGCCATAACGGCGACCTGTACGTCGACGAGATTTTCTGGAT 20142 || |||||| ||| || | | ||| || | |||||||| ||| ||| ||||| Sbjct 237 AGCAGCACCGCCCAGGGCTACCATGGCCACGTCTACGTCGATGAGTATTTTTGGAT 292 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 100608010126734