Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09]
3,088,511 sequences; 2,785,377,831 total letters
Query= NC_028898.1
Length=35764
Score E
Sequences producing significant alignments: (Bits) Value
seq3088503 122 2e-23
>seq3088503
Length=21467
Score = 122 bits (134), Expect = 2e-23
Identities = 293/443 (66%), Gaps = 3/443 (1%)
Strand=Plus/Minus
Query 2378 TAGGCGGAATGGGTAATGCTCGAAGGGGTAGAAAAATAAGTAATCCGATATTGTTTTTGG 2437
||||| ||||| ||||| || || || || || || || | || | | || ||
Sbjct 10648 TAGGCCTCATGGGCCATGCTGGACGGCGTCGAGAAGTAGGTTTTGCGCCACTTCTTGTGC 10589
Query 2438 CTTGCCATACCCGCAGCAACTTTGCGGATTTCTTCAAAGCGGTTTACCCAAAAGATTTCA 2497
| ||||| |||| ||| || ||| | ||| ||||| | ||| |||| |||
Sbjct 10588 ATGGCCATGCCCGAAGCGACCTTGTTCAGTTCCTCAAACTTGAACGTCCAGAAGAATTCG 10529
Query 2498 TCAAAATAGAGATTGCCGTGGTAAGACTGTGCCGTTTTCGAGTTTGTACCCAAGAAAATT 2557
|| || |||| |||||||||||| ||| || || || || ||||| | |||||
Sbjct 10528 TCGAAGTAGAAATTGCCGTGGTAGCCCTGGGCGGTACGCGCATTGGTACCGAGGAAAAAC 10469
Query 2558 AGTTGAGACTCGTTCGGCAAGGTAATGGTTTCGCCTTTTAGCTCCACATCGGCAACCCGT 2617
|| | | |||| ||||| |||| || || | ||||| ||| || ||||
Sbjct 10468 AGCTCGGCGCCGTTGGGCAATACGATGGGATCCCCCGTCAGCTCGACACCGATAACCTCA 10409
Query 2618 TTGGCGTATGCCACAATATAGGCTCTAAATTGCAATGCCTGTTTTTTCGAGGCGGAAATA 2677
||| ||||| || || | | ||| | | || || |||||||| ||||| |
Sbjct 10408 CGGGCAAATGCCTGGATGTACCCGCGAAACAGATAGGCTTGGTTTTTCGATGCGGACAGG 10349
Query 2678 AAAATCTGATTTCTACCGGTTACTAACGCATCAACTAACGCCTCGTGAGCAAAATAATAA 2737
|| |||||||| | |||||| | | |||||||| ||||||||| | ||||| |||||
Sbjct 10348 AAGATCTGATTGCGCCCGGTTTCCAGCGCATCAAGAAACGCCTCGCGGGCAAAGTAATAG 10289
Query 2738 GTCGCTCCAATTTGACGACTTTTAAGAATATTGCGGATTCGATGAGTCAGCCCAGCTTCG 2797
||||| || || || || ||||| || || ||| | || ||| | ||||| |
Sbjct 10288 GTCGCGCCGATCTGCCGGCTTTTGAGGATGACGCGAGTCCGTTGATT---GCCAGCCCGG 10232
Query 2798 TGCCATTTTTTCTGATAATGGAA 2820
| ||| | |||||| || | |||
Sbjct 10231 TACCAGTCTTTCTGGTAGTCGAA 10209
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 110130274528532
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |