Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09] 3,088,511 sequences; 2,785,377,831 total letters Query= NC_028943.1 Length=29237 Score E Sequences producing significant alignments: (Bits) Value seq3088503 369 7e-98 seq3088488 352 5e-93 seq3084702 167 4e-37 seq2959876 145 1e-30 seq3088487 118 2e-22 seq3063309 107 3e-19 >seq3088503 Length=21467 Score = 369 bits (408), Expect = 7e-98 Identities = 1016/1528 (66%), Gaps = 47/1528 (3%) Strand=Plus/Minus Query 8433 CGCCCAGGCGAGGTCGGCGTGGCTGGCTTCCTCGCTGCGGCTGGCCTCATAGGTGGCGCT 8492 ||||||||| |||||||| |||| || | ||| |||| | || |||||| Sbjct 11462 CGCCCAGGCCAGGTCGGCATGGCCGGTGTTGTCGTTGCGCCCTGCGGTGTAGGTGTACTG 11403 Query 8493 GCGTCCGC-TGCTGGTCATGGTCTTGCGGATAGCCATAAACGAGCTG-GTGATGTCGGTG 8550 ||| |||| ||| ||| | ||||||||||| ||||| | ||| ||| | |||||||| Sbjct 11402 GCGACCGCCTGC-GGTGACCGTCTTGCGGATCGCCATCATCGA-CTGCGCCATGTCGGTC 11345 Query 8551 GCGCTGACGTCATATTCCAGACAGCCACGGCGAATAACGTCTTTTGCCTTGAGCACCATT 8610 | | |||| | ||||| | ||| | || ||||| | ||||| ||||||| Sbjct 11344 CACCCGGCGTCGAACTCCAGCCGGCCGTTATGGATCACGTCATAGGCCTTCAGCACCAG- 11286 Query 8611 GCG-GTTTTCATTTCCGGCGTGTAGCGGATATCGCGTGCGGCGGGATAGAACGAGCGAAC 8669 ||| ||||| | ||| |||| |||| || | | || || ||||| ||| || Sbjct 11285 GCGTGTTTTGACTTCGGGCGAATAGCTGAAGGTGGTCACAGCCGGGAAGAACTGGCGCAC 11226 Query 8670 GAGCTGGAACACGCCGACACCGAGGCCGGTGGCATCAATTCCGATGTATTCGACGTTGTA 8729 ||||| ||||||| ||| || |||||| ||||||| ||||| || || ||| Sbjct 11225 CAGCTGCGCCACGCCGCTACCCAGCCCGGTGACATCAATCCCGATATAGGTCACCCAGTA 11166 Query 8730 TTTTTCGGTGAGTTTGCGGATGGATTCAGCCTGGGTGGCAAAGTCCATGCCTTTCCACTG 8789 ||| || || ||| || | ||||||| |||||||||||||| | || Sbjct 11165 GCGGTCGCAGACGTTTTTGATAAATGCCGCCTGGGCCGCAAAGTCCATGCCCCGGAATTG 11106 Query 8790 GTGACGCTCAAGTATTCTGAATTTGCCACCGGCCACCACCGGCGGTGCCAGCACCACGCA 8849 ||| ||||| || | | ||||||||| || | |||| |||||| || | |||||| Sbjct 11105 GTGCCGCTCCAGGACGCGGAATTTGCCGCCCGGTACCAGCGGCGGCGCAACCACCACCAG 11046 Query 8850 TCCGGCACTGTCGCCACGGTGT--GACGGGTCGTAACCAATCCAGACCGGGCGGGAGCCG 8907 |||| | || || ||| | | |||||||| || ||||| ||| | ||| ||| Sbjct 11045 CCCGGAGCAATCACC--GGTTTCCGCTGGGTCGTAGCCGATCCATACCTGACGGTCACCG 10988 Query 8908 AACGGATTCGCGGCAAACGGCGCATAGTCTTC---CCATTCTTCCAGCGTGTCGACCATG 8964 ||||| | ||| || ||| ||||| || |||||| || ||||||||||| Sbjct 10987 AACGGCCGCATGGCGAATGGCTTGTAGTCCTCTGCCCATTCAACCCAACTGTCGACCATG 10928 Query 8965 CAGCGTTGCAGCTCCTCGAACGGGAACA--CCGACGCCTTGTCGTCAACAAATTCACACA 9022 |||| |||||| | | ||||| || | | | | || | |||||||||| ||||||| Sbjct 10927 CAGCTCTGCAGCAACGCCAACGGAAAGATGCTGGCTCCAT--CGTCAACAAACTCACACA 10870 Query 9023 TGAACAGGTTTTTAAAATCGTCGGCGCTGTTTTCGCGTTTAAGCTGCTCAATGTCGAACA 9082 | |||||||| || | || | ||||| || || | || |||||||||||||| Sbjct 10869 TCAACAGGTTGGCGAACGCCTCAGGGCTGTACTCCCGACGCAACTCCTCAATGTCGAACA 10810 Query 9083 GCGTGCAGCCACCTTTCAGGGCGTCCTCAATGGTGACAATCTGCCGCCACTGACCGTCCG 9142 | ||||| || | | |||||| |||||||| |||||||||||| | |||| Sbjct 10809 GATCACAGCCGCCGTGCTCTGCGTCCAGGATGGTGACGATCTGCCGCCACAACCGGTCCT 10750 Query 9143 CACAGAGAAGCCCACCGGCAAGAGCG--TTATGACTGACGTCGATTTCCACGCGTTCGGC 9200 | | |||| | | || | ||||| || ||||||| | | ||| || Sbjct 10749 CGC--AGAACCGCCCCTGTTGGAGCGCCCCGTGGGAAACGTCGACCTTGGTGTGTT--GC 10694 Query 9201 GGCGCTGGCGCGTCCCCGGTTGAACAGTTCACCCGACCAGAACGGGTAGGCGTCGTGCGC 9260 | ||||||| ||| |||||| | || || | |||||| | |||||| || || || Sbjct 10693 GCCGCTGGC-TTACCCTTGTTGAAGCGCTCGCCGGTCCAGAAGGTGTAGGCCTCATGGGC 10635 Query 9261 CAGCGTGGACGGGGTGGAGAAATAGGTCGAGCGCAGGTGACTCTGTGAGGCCATACCTGA 9320 || ||||||| || ||||| ||||| |||| | | || |||||| || || Sbjct 10634 CATGCTGGACGGCGTCGAGAAGTAGGTTTTGCGCCACTTCTTGTGCATGGCCATGCCCGA 10575 Query 9321 TGCCACCTTACGCAGTACCTGAAAATTCGGTATCCAGAAAATCTCGTCGACGTACAGGTC 9380 || ||||| |||| ||| ||| || ||||||| | ||||||| ||| | | Sbjct 10574 AGCGACCTTGTTCAGTTCCTCAAACTTGAACGTCCAGAAGAATTCGTCGAAGTAGAAATT 10515 Query 9381 GCCGTTATGGCTCTGCGCGGTGTTGGAGTTGGTGCCGAGAAAAATCAGTTTTGCGCCGTT 9440 ||||| | || ||| ||||| | ||||| ||||| |||| ||| | |||||| Sbjct 10514 GCCGTGGTAGCCCTGGGCGGTACGCGCATTGGTACCGAGGAAAAACAGCTCGGCGCCG-- 10457 Query 9441 ATTGCCCAGGACAATCGGGTCACCGGTCAG---GTCAACGTCAACCAGCCGGGCAAAGGC 9497 ||| || || || || || || ||||| | || || |||| |||||||| || Sbjct 10456 -TTGGGCAATACGATGGGATCCCCCGTCAGCTCGACACCGATAACCTCACGGGCAAATGC 10398 Query 9498 GATGATGTATTCGCGGAACACATACGCCTGCGTTTTACTGGCCGACAGAAAAATCTGGTT 9557 |||||| |||| |||| ||| || || |||| || ||||| || ||||| || Sbjct 10397 CTGGATGTACCCGCGAAACAGATAGGCTTGGTTTTTCGATGCGGACAGGAAGATCTGATT 10338 Query 9558 ATGACCGGTTTTCAGGGCGCGCAGCAGCGCCTCGCGGGAAAAATAAAACGTCGCGCCAAT 9617 | ||||||| ||| || || | ||||||||||| ||| ||| | |||||||| || Sbjct 10337 GCGCCCGGTTTCCAGCGCATCAAGAAACGCCTCGCGGGCAAAGTAATAGGTCGCGCCGAT 10278 Query 9618 CTGGCGGGATTTCAGGATATCGCGGATGCGGTGCT--CAAGCCCGGCGCGATACCAGTGC 9675 ||| ||| ||| ||||| |||| | || || | | ||||||| ||||||| Sbjct 10277 CTGCCGGCTTTTGAGGATGACGCGAGTCCGTTGATTGCCAGCCCGG-----TACCAGTCT 10223 Query 9676 AACTGATATTCGAAAGACTGCTCAAAGAAAATCTGCTC-CAGCTTTTCGATAGCCTCGTC 9734 ||| || |||||| | || | ||| || | | || | ||||| ||| || Sbjct 10222 TTCTGGTAGTCGAAACAGCCGTC-GATAAACGCTTCACGCAACAGCTCGATCTGCTCTTC 10164 Query 9735 ACTGAAAAAATTCTTTTTCGGT-TTGCGCCGCCCGCCTTTGTTGCGGTTAGCGATGTTCG 9793 |||| | || |||| ||| || | | || | |||||| ||||| | ||| | Sbjct 10163 GCTGATATCGTT-TTTTGGGGTCTTTTTCTTCGGACCCTCGTTGCGTTTAGCCAGGTTAG 10105 Query 9794 GATTAAGGTCTGCCTCGTTGCCGGTCTGGCTG-TAGCGGTTTACCCGTGCCAGTCGTTCA 9852 | || || || | ||| | || | | ||| |||| | | | ||| | ||||| Sbjct 10104 GGTTGAGCTCGGTTTCGGTACC-GCCGCCCTGAAAGCGCTGAATTCTGGCCTGGCGTTCC 10046 Query 9853 ATCTGGCGTCCGAGCAGGTCAATTTCCTTGAAGTCACCGCCGGTTTTCTGCGGT--TTGA 9910 | ||||| ||||| ||||||||||||||||| |||||| | | ||| | |||| Sbjct 10045 AATTGGCGGTGCAGCAGATCAATTTCCTTGAAGTCCCCGCCGCTCT--TGCTTTCCTTGA 9988 Query 9911 TGATGAGCTGGGTCAGCCGCGCTTCCAG 9938 ||| ||||| || |||||||||||| Sbjct 9987 GGATCAGCTGCACCAACCGCGCTTCCAG 9960 Score = 170 bits (188), Expect = 3e-38 Identities = 217/299 (73%), Gaps = 0/299 (0%) Strand=Plus/Minus Query 11874 ATTGAACCGTGGTATCAGGAAGACCCTGACCTTGTGGTGATTGTGGGACGTCAGCTACTG 11933 |||| |||||||| |||||||||||||| || |||||||| || || || || ||| Sbjct 8111 ATTGCGCCGTGGTACCAGGAAGACCCTGATCTGGTGGTGATCTGCGGTCGCCAACTGCTG 8052 Query 11934 GCGGACAAGTATTTCCCCATCGTTAACAAGGAGCAGGACAACAGCGAGATGCTGGCCGCT 11993 || |||||||||||||| ||| | ||||| || | | | || ||||||||||| Sbjct 8051 GCCGACAAGTATTTCCCGATCATCAACAAAGACAACGCGCCGACTGAAATGCTGGCCGCC 7992 Query 11994 GACGTCATTATCAGCCAGAAACGCATCGGCAACCTGCCGGCGGTACGCGTCCCGTACTTC 12053 || || | | ||| || || ||| | ||||| |||| || || ||||| || |||||| Sbjct 7991 GATATCGTCACCAGTCAAAAGCGCTTGGGCAATTTGCCAGCCGTGCGCGTGCCTTACTTC 7932 Query 12054 CCGGCGGATGCGATGCTCATCACGAAGCTGGAAAACCTGTCCATCTACTACATGGATGAC 12113 ||| || | | |||| |||| ||||||||||||||||| ||||||| ||| | | Sbjct 7931 CCGCCGCGCGGGTTGCTGGTCACCAAGCTGGAAAACCTGTCGATCTACTGGCAGGAAGGC 7872 Query 12114 AGCCATCGCCGCGTGATTGAGGAAAACCCGAAACTCGACCGCGTGGAGAACTACGAGTC 12172 |||| |||||| | | || || | || | |||||| | || ||||||||||| Sbjct 7871 AGCCGCCGCCGCACCGTCGTCGACAATGCCAAGCGTGACCGCATCGAAAACTACGAGTC 7813 Score = 138 bits (152), Expect = 2e-28 Identities = 247/361 (68%), Gaps = 6/361 (2%) Strand=Plus/Minus Query 18550 AGCTGTGGAACCCGGACACCTGCCCGGCAAATCTGCTGCCGTGGCTGGCGTGGTCATTTT 18609 |||| || || || ||| | |||||| | |||||||| | ||||| ||| | || | Sbjct 1096 AGCTTTGCAATCCCGACGCTTGCCCGCTGGAGCTGCTGCCATACCTGGCCTGGGCCTTCT 1037 Query 18610 CGGTTGACCGCTGGGATGATAAGTGGCCGGAAGCGACAAAACGCGCTGTTATCCGCGATG 18669 ||||||| |||||||| || ||||| ||||| | ||||| | | || || Sbjct 1036 CGGTTGATCGCTGGGACAGCAAATGGCCTGAAGCCGCGAAACGGTCGGCCATTCGATCAT 977 Query 18670 CGTATTTCATTCACTGCCATAAGGGCACTATTGGTGCGATTCGCCGTGTGGTGGAGCCGC 18729 | | ||||| |||| | ||||||||| || || || | || || ||||| || ||| Sbjct 976 CCCACTTCATCCACTCGCGTAAGGGCACCATCGGAGCCCTACGACGCGTGGTCGAACCGT 917 Query 18730 TCGGCTATCTGATTGAGGTGAGGGAGTGGTGGCA------GCTCAACGAGGAGCCGGGGA 18783 | || ||||||||||| ||| ||||||||||| || |||| | ||| || | Sbjct 916 TGGGGTATCTGATTGAAGTGCTTGAGTGGTGGCAAACCACGCCGAACGGTGTGCCAGGTA 857 Query 18784 CGTTCCGCATCGTTGTTGGCGTGCTTGAGCAGGGTATTACCGAGGAAATGTATCAGGAGC 18843 | ||| ||| || || ||||| || || || |||||||||||||| ||||||| Sbjct 856 CATTCGCAATCAAGGTGGGTGTGCTCGAAACCGGCATAACCGAGGAAATGTACCAGGAGC 797 Query 18844 TGGAGCGTCTCGTTGCTGATGCAAAACCTGCAAGCCGCCATCTGACGGGACTGGCTATCA 18903 || | ||| | | || || | || | | ||| || ||||| || |||||||||| Sbjct 796 TGACCTGGCTCATCGACGACGCCAGGCCAGTCACCCGACACCTGACCGGCCTGGCTATCA 737 Query 18904 G 18904 | Sbjct 736 G 736 Score = 104 bits (114), Expect = 4e-18 Identities = 219/321 (68%), Gaps = 8/321 (2%) Strand=Plus/Minus Query 7556 AAATCGTCCTTCGTTGCCACTTCACTGAGCGGGATAATTTTAATGCCGTCGG-CTTTCCC 7614 || || ||||| | ||||| ||||||| |||||| | | || ||||| ||| || Sbjct 12324 AATTCATCCTTGGCCGCCACCTCACTGACCGGGATCAGCTGTATCCCGTCCTTCTTGCCG 12265 Query 7615 CTGCGGGGCATAGAGAAACAGATTTTTAAAGTTGTTGCGGCCTTTCGA---CTTGACCAT 7671 || || | ||| | ||||| || ||| ||| | || || || ||||| | Sbjct 12264 GTG-GGCGAATACACAAACAAGTTGCGAAAATTGCCTGGCCCCTTGGAGTCCTTGAG-AG 12207 Query 7672 GTTTTCGCGAAGCATTTCGATATCGTTGCGATCCTGCACGGCATCGGTGACGTACATGAT 7731 || ||| |||| | |||||||| | | ||| |||||||||| | ||| | || Sbjct 12206 CCTTGCGCAAAGCGT--CGATATCGGTTTCAGTCTGTGCGGCATCGGTCATGTAGAGAAT 12149 Query 7732 ATATCCGGCATGAGCGCCGTTTTCGTAATACTTGCGGCGGAACAGCGTGGCCGACTCATT 7791 | ||||| ||| ||| || ||||| |||||||||||||||| ||||||||| || || Sbjct 12148 GAAGCCGGCGTGACTGCCATTCTCGTAGTACTTGCGGCGGAACAACGTGGCCGATTCGTT 12089 Query 7792 CAGCCAGGCAGAATTAAGGGCGCTGAGATATTCCGGCAGGCCGTACAGCTCCTGATTAAT 7851 ||| | || || | | ||| || | | ||||||| ||| || | |||||| | | Sbjct 12088 GAGCAACGCCGACTGCAAGGCACTAATCCACTCCGGCAAGCCATAAATCTCCTGGTGCAA 12029 Query 7852 ATCCGGCTCCAGCAGGTGAAA 7872 ||||| || |||| ||||| Sbjct 12028 ATCCGCTTCTCGCAGATGAAA 12008 >seq3088488 Length=17142 Score = 352 bits (390), Expect = 5e-93 Identities = 781/1154 (68%), Gaps = 42/1154 (4%) Strand=Plus/Minus Query 22515 GACTATCATCACGGCGTGCAGGTGCTGGAGATTAACGACGGCACCCGCGTCATTTCCACC 22574 || |||| |||||||||| ||| | || | ||||||||||||||| |||| ||| Sbjct 16622 GATTATCTCCACGGCGTGCGGGTCATCGAACTCAACGACGGCACCCGCCCCATTCGCACT 16563 Query 22575 GTATCCACTGCCATTGTCGGCATGGTCTGCACGGCCAGCGATGCGGATGCGGAAACCTTC 22634 | |||| || | |||||||||| ||||| || |||||||| | ||| Sbjct 16562 ATTCCCACCGCAGTCATCGGCATGGTTTGCACCGCTGAAGATGCGGACCCACTCGTTTTC 16503 Query 22635 CCCCTCAATAAACCTGTGCTGATTACCAATGTGCAGAGCGCAATTGCAAAGGCCGGTAAA 22694 || || | | || || || || ||||| ||||| | ||| | | |||||||| Sbjct 16502 CCTCTGGACACTCCAGTCCTCATCACCAACGTGCAAACCGCCGTCGGCAAGGCCGGCGTC 16443 Query 22695 AAAGGCACTCTGGCGGCATCGTTGCAGGCCATCGCCGACCAGTCAAAACCGGTCACAGTT 22754 || ||||| ||||| || |||| | ||||||||||||| | || || | || ||| Sbjct 16442 AAGGGCACCCTGGCTGCCAGCCTGCAAGGCATCGCCGACCAGACCAAGCC--TTAC-GTT 16386 Query 22755 GTCGTG---CGTGTGGAAGACGGCACCGGCGACGACGAGGAA-ACGAAACTCGCGCAGAC 22810 ||||| || || |||| ||| | | ||| | ||| || |||| ||| | || Sbjct 16385 ATCGTGGTACGGGTCAAAGAAGGCGCTGACGAAG-CGACGACTACGAG---CGCCCTGA- 16331 Query 22811 CGTTTCCAATATCATCGGCACCACCGACGAAAACGGTCAGTACACCGGACTGAAAGCCCT 22870 || | || || |||| || |||||| |||||||| ||||||| || Sbjct 16330 --TTGGCGGTA-------CAACACCAAC-----CGGTCAATACACCGGCATGAAAGCTCT 16285 Query 22871 GCTGGCGGCAGAGTCGGTAACCGGTG----TTAAACCGCGTATTCTCGGAGTGCCGGGAC 22926 ||| || || | || || ||| | | |||||||| || || ||||| || | Sbjct 16284 GCTCGCAGCCAAATC----ACGCGTGGGCATGACTCCGCGTATCCTTGGCGTGCCAGGCC 16229 Query 22927 TGGACACCAAAGAGGTGGCTGTTGCACT-GGCATCAGTCTGTCAGA-AGCTGCGCGCTTT 22984 | |||| || || || || ||| || || | || | | |||||||| || Sbjct 16228 TCGACAGTTTGCCAGTAGCCACCGCCCTCGGCGCCA-TC-GCCAAAGACCTGCGCGCCTT 16171 Query 22985 CGGGTATATCAGCGCATGGGGCTGTAAAACCATTTCCGAGGTGAAAGCCTACCGTCAGAA 23044 | || | ||||| ||| ||| ||||||| ||||| || ||||| |||| Sbjct 16170 TGCATACGTAAGCGCCTGGAACTGCAAAACCAAGGAAGAGGTAGTGGCGTACCGCGAGAA 16111 Query 23045 TTTCAGCCAGCGTGAGCTGATGGTCATCTGGCCGGATTTCCTCGCATGGGATACGGTCAC 23104 ||| | || || ||||||| || |||||||| ||||| ||||| || ||||| Sbjct 16110 CTTCGGTGCCCGCGAAATGATGGTGATTTGGCCGGACTTCCTGAACTGGGACACTGTCAC 16051 Query 23105 GAGTACCACCGCCACCGCGTATGCCACTGCCCGTGCGCTGGGACTGCGTGCCAAAATCGA 23164 | | ||||||| ||| | ||| ||||| || || || || || ||||| ||||| Sbjct 16050 CAACAAGACCGCCAGCGCTTCGGCCGTGGCCCGCGCCCTCGGCCTTCGCGCCAAGATCGA 15991 Query 23165 CCAGGAGCAGGGCTGGCATAAAACGCTGTCCAACGTCGGGGTAAACGGTGTTACCGGCAT 23224 ||| ||| ||| ||||||||||| ||||||||||| | || | || || ||||| || Sbjct 15990 CCAAGAGACGGGTTGGCATAAAACCCTGTCCAACGTGGCCGTGAGTGGCGTGACCGGTAT 15931 Query 23225 CAGCGCATCTGTATTCTGGGATTTGCAGGAGTCCGGCACCGATGCTGACCTGCTGAACGA 23284 |||||| || ||||||||| |||| | | | |||||| || || || ||| | Sbjct 15930 CAGCGCCGACGTGTTCTGGGATCTGCAAAACCCAGCCACCGACGCCAACTACCTCAAC-A 15872 Query 23285 GTCAGG-CGTCACAACGCTGATTCGTCGTGA-CGGTTTCCGCTTCTGGGGTAACCGTACC 23342 | | | |||||| || ||||| | || | |||||| ||||||||||||| ||| ||| Sbjct 15871 GCAACGACGTCACCACCCTGAT-CAACGCCAACGGTTTTCGCTTCTGGGGTAGCCGCACC 15813 Query 23343 TGCTCTGATGACCCGCTGTTCCTCTTTGAAAACTACACCCGCACCGCGCAGGTGCTGGCC 23402 ||| |||||||||| ||||| ||| |||||||||||||||||||||||| | || || Sbjct 15812 TGCAGTGATGACCCGTTGTTCGCCTTCGAAAACTACACCCGCACCGCGCAGATCCTCGCG 15753 Query 23403 GACACGATGGCTGAGGCGCACATGTGGGCGGTGGACAAGCCCATCACCGCAACGCTGATT 23462 ||||| |||| || |||||||||||||| || ||| || || ||| | ||| | Sbjct 15752 GACACCATGGGCGAAGCGCACATGTGGGCAGTTGACCGCCCTATGCACGCCTCCCTGGTA 15693 Query 23463 CGCGACATCGTTGACGGCATCAATGCCAAATTCCGTGAGCTGAAAACAAACGGCTATATC 23522 |||||| | || || ||| | | ||||| | || ||| ||||| | | ||||| | Sbjct 15692 CGCGACCTGGTCGAAGGCGTAAGCGCCAAGATGCGCGAGTTGAAATCCCAGGGCTACCTG 15633 Query 23523 GTGGATGCGACCTGCTGGTTTAGCGAAGAATCCAACGATGCGGAAACCCTCAAGGCCGGA 23582 | | | | |||||| || || |||| || |||||||||||||| Sbjct 15632 ATCGGCGGCAGTTGCTGGAACCCGGACGACATCAACACCAAAGACACCCTCAAGGCCGGC 15573 Query 23583 AAACTGTATATCGACTATGACTATACACCGGTGCCTCCTCTCGAAAACCTGACCCTGCGC 23642 || || | | || || ||||| || || ||||| || || ||| |||| ||| | ||| Sbjct 15572 AAGCTCTGGCTTGATTACGACTACACCCCCGTGCCGCCACTTGAAGACCTCACCTTCCGC 15513 Query 23643 CAGCGTATCACCGA 23656 ||||| |||||||| Sbjct 15512 CAGCGAATCACCGA 15499 >seq3084702 Length=3045 Score = 167 bits (184), Expect = 4e-37 Identities = 261/368 (71%), Gaps = 8/368 (2%) Strand=Plus/Minus Query 18544 TTCGTGAGCTGTGGAACCCGGACACCTGCCCGGCAAATCTGCTGCCGTGGCTGGCGTGGT 18603 |||| || || | ||| | || |||||||||| || |||||||| ||||| ||| Sbjct 2912 TTCGCGACCTCTACAACGCTGATACCTGCCCGGTGCATTTGCTGCCGCATCTGGCCTGGG 2853 Query 18604 CATTTTCGGTTGACCGCTGGGATGATAAGTGGCCGGAAGCGACAAAACGCGCTGTTATCC 18663 | | ||||| || ||||||||| | ||| | || ||||| || || || | ||| Sbjct 2852 CTTGGTCGGTGGATCGCTGGGATTACCGATGGACAGAGGCGACCAAGCGTGCCGCCATCA 2793 Query 18664 GCGATGCGTATTTCATTCACTGCCATAAGGGCACTATTGGTGCGATTCGCCGTGTGGTGG 18723 | | |||| ||| || ||| ||||| ||||| || || | || |||||||| | Sbjct 2792 AGGCCTCTTATTACATCCATGCCCACAAGGGAACTATCGGCGCCTTGCGTCGTGTGGTTG 2733 Query 18724 AGCCGCTCGGCTATCTGATTGAGGTGAGGGAGTGGTGGCA-GCTCAAC--GAGGA---GC 18777 |||| || ||||| |||||||| | | ||||||| | ||| | |||| || Sbjct 2732 AGCCTCTGGGCTACCTGATTGAAATCATCGAGTGGTTTAACGCTGTGCCCGAGGGCACGC 2673 Query 18778 CGGGGACGTTCCGCATCGTTG-TTGGCGTGCTTGAGCAGGGTATTACCGAGGAAATGTAT 18836 | ||||| || || | | | |||||||| ||| ||||| ||||| || |||||| Sbjct 2672 CAGGGACATTT-GCGTTGAAGGTTGGCGTGAGTGATTCCGGTATCACCGAAGAGATGTAT 2614 Query 18837 CAGGAGCTGGAGCGTCTCGTTGCTGATGCAAAACCTGCAAGCCGCCATCTGACGGGACTG 18896 |||||||||||||| || || | ||| || || |||| ||||||||| ||||||| ||| Sbjct 2613 CAGGAGCTGGAGCGGCTGGTCGATGACGCCAAGCCTGTAAGCCGCCACTTGACGGGGCTG 2554 Query 18897 GCTATCAG 18904 |||||||| Sbjct 2553 GCTATCAG 2546 >seq2959876 Length=477 Score = 145 bits (160), Expect = 1e-30 Identities = 243/350 (69%), Gaps = 20/350 (6%) Strand=Plus/Minus Query 18544 TTCGTGAGCTGTGGAACCCGGACACCTGCCCGGCAAATCTGCTGCCGTGGCTGGCGTGGT 18603 |||| || || | ||| | || |||||||||| | || |||||||| ||||| ||| Sbjct 344 TTCGCGACCTCTACAACGCTGATACCTGCCCGGTACATTTGCTGCCGCATCTGGCATGGG 285 Query 18604 CATTTTCGGTTGACCGCTGGGATGATAAGTGGCCGGAAGCGACAAAACGCGCTGTTATCC 18663 ||| ||||| || ||||||||| | ||| | || ||||| |||||||| | ||| Sbjct 284 CATGGTCGGTGGATCGCTGGGATTACCGATGGACCGAGGCGACCAAACGCGCCGCCATCA 225 Query 18664 GCGATGCGTATTTCATTCACTGCCATAAGGGCACTATTGGTGCGATTCGCCGTGTGGTGG 18723 | | |||| ||| || ||| |||||||| || || ||| | ||||||||||| | Sbjct 224 AGGCCTCTTATTACATACATGCCCACAAGGGCACCATCGGCGCGTTACGCCGTGTGGTAG 165 Query 18724 AGCCGCTCGGCTATCTGATTGAGGTGAGGGAGTGGTGGCAGCTCAAC--GAGGAGCCG-- 18779 |||| || ||||| ||||| ||| | | ||||||| ||||| |||| ||| Sbjct 164 AGCCTCTGGGCTACCTGATCGAGATTATCGAGTGGT------TCAACATGAGG-CCCGAA 112 Query 18780 GGGACGTTCCGCATCGTT---------GTTGGCGTGCTTGAGCAGGGTATTACCGAGGAA 18830 ||||| ||| | || || || ||| | || ||||| || |||||| Sbjct 111 GGGACCCCAGGCACCTTTGCGTTAAAGGTCGGGGTGTTGGACACCGGTATCACTGAGGAA 52 Query 18831 ATGTATCAGGAGCTGGAGCGTCTCGTTGCTGATGCAAAACCTGCAAGCCG 18880 |||||||||||||||||||| || ||| ||| || || || | ||||| Sbjct 51 ATGTATCAGGAGCTGGAGCGGCTGATTGATGACGCCAAGCCCGTCAGCCG 2 >seq3088487 Length=16894 Score = 118 bits (130), Expect = 2e-22 Identities = 240/354 (68%), Gaps = 8/354 (2%) Strand=Plus/Minus Query 18558 AACCCGGACACCTGCCCGGCAAATCTGCTGCCGTGGCTGGCGTGGTCATTTTCGGTTGAC 18617 |||||||| || ||||||||| |||| | | |||| ||| | | |||||||| Sbjct 13092 AACCCGGATACGTGCCCGGCAGGCTTGCTTCACCAGTTGGCCTGGGCCTGGTCGGTTGAT 13033 Query 18618 CGCTGGGATGATAAGTGGCCGGAAGCGACAAAACGCGCTGTTATCCGCGATGCGTATTTC 18677 |||||||| | || ||| |||| || | || || || | ||| ||| |||| | | Sbjct 13032 CGCTGGGACAACAACTGGTCGGAGGCAATCAAGCGTGCGGCTATACGCTCGGCGTTCTAC 12973 Query 18678 ATTCACTGCCATAAGGGCACTATTGGTGCGATTCGCCGTGTGGTGGAGCCGCTCGGCTAT 18737 | || ||| |||||||| || || || | || ||||| || || || | || || Sbjct 12972 GTACATACCCACAAGGGCACCATCGGCGCTCTGCGGCGTGTCGTCGAACCTTTGGGTTAC 12913 Query 18738 CTGATTGAGGTGAGGGAGTGGTGGCA------GCTCAACGAGGAGCCGGGGACGTTCCGC 18791 ||||| || || |||||||||||| || || | | ||||| || || || Sbjct 12912 CTGATCGAAGTTCAGGAGTGGTGGCAGACCACGCCAAAGGGCGTTCCGGGCACCTT-TGC 12854 Query 18792 ATCG-TTGTTGGCGTGCTTGAGCAGGGTATTACCGAGGAAATGTATCAGGAGCTGGAGCG 18850 | | || |||||||| || ||| ||||||||||| |||||||| || || | Sbjct 12853 GTTGAAGGTGGGCGTGCTGGAAACGGGCATTACCGAGGAGATGTATCAAGAACTCACATG 12794 Query 18851 TCTCGTTGCTGATGCAAAACCTGCAAGCCGCCATCTGACGGGACTGGCTATCAG 18904 || ||| ||| || ||||| | || || ||| ||||||| |||||||||| Sbjct 12793 GCTAATTGATGACGCCAAACCAGTCAGTCGGCATATGACGGGCTTGGCTATCAG 12740 >seq3063309 Length=1409 Score = 107 bits (118), Expect = 3e-19 Identities = 206/298 (69%), Gaps = 8/298 (3%) Strand=Plus/Minus Query 9350 GTATCCAGAAAATCTCGTCGACGTACAGGTCGCCGTTATGGCTCTGCGCGGTGTTGGAGT 9409 ||||||| ||| ||| |||||||| | || ||| | | || ||| |||||| || | Sbjct 294 GTATCCAAAAATACTCATCGACGTAGACGTGGCCATGGTAGCCCTGGGCGGTGCTGCTAT 235 Query 9410 TGGT-GCCGAGAAAAATCAGTTTTGCGCCGTTATTGCCCAGGACAATCGGGTCACCGGTC 9468 |||| | | ||||| ||| | |||||||| || | || |||||| |||||| Sbjct 234 TGGTCGACAAGAAACG-CAGCTCGGCGCCGTTGCTGAGCGTGA---TCGGGTTGCCGGTC 179 Query 9469 AGGTCAACGTC-AACCA--GCCGGGCAAAGGCGATGATGTATTCGCGGAACACATACGCC 9525 || || | ||| ||||| || ||||| ||||||||| |||||| | | || | Sbjct 178 AGCTCGATGTCGAACCACTGCTTTGCAAACTGGATGATGTAACTGCGGAAAATTTCCGAC 119 Query 9526 TGCGTTTTACTGGCCGACAGAAAAATCTGGTTATGACCGGTTTTCAGGGCGCGCAGCAGC 9585 |||| ||||||||||| || | |||||| | ||||| || |||| || | | Sbjct 118 TGCGAGCGGCTGGCCGACAGGAACACCTGGTTGTCGCCGGTCAGCACGGCGTCCATGAAC 59 Query 9586 GCCTCGCGGGAAAAATAAAACGTCGCGCCAATCTGGCGGGATTTCAGGATATCGCGGA 9643 || |||| || || || ||||| ||| | ||||||| ||||||||| | ||||| Sbjct 58 GCTTCGCCGGCGAAGTAGTACGTCAGGCCCACCTGGCGGCTTTTCAGGATGTTGCGGA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 90103172715600