Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09]
3,088,511 sequences; 2,785,377,831 total letters
Query= NC_028943.1
Length=29237
Score E
Sequences producing significant alignments: (Bits) Value
seq3088503 369 7e-98
seq3088488 352 5e-93
seq3084702 167 4e-37
seq2959876 145 1e-30
seq3088487 118 2e-22
seq3063309 107 3e-19
>seq3088503
Length=21467
Score = 369 bits (408), Expect = 7e-98
Identities = 1016/1528 (66%), Gaps = 47/1528 (3%)
Strand=Plus/Minus
Query 8433 CGCCCAGGCGAGGTCGGCGTGGCTGGCTTCCTCGCTGCGGCTGGCCTCATAGGTGGCGCT 8492
||||||||| |||||||| |||| || | ||| |||| | || ||||||
Sbjct 11462 CGCCCAGGCCAGGTCGGCATGGCCGGTGTTGTCGTTGCGCCCTGCGGTGTAGGTGTACTG 11403
Query 8493 GCGTCCGC-TGCTGGTCATGGTCTTGCGGATAGCCATAAACGAGCTG-GTGATGTCGGTG 8550
||| |||| ||| ||| | ||||||||||| ||||| | ||| ||| | ||||||||
Sbjct 11402 GCGACCGCCTGC-GGTGACCGTCTTGCGGATCGCCATCATCGA-CTGCGCCATGTCGGTC 11345
Query 8551 GCGCTGACGTCATATTCCAGACAGCCACGGCGAATAACGTCTTTTGCCTTGAGCACCATT 8610
| | |||| | ||||| | ||| | || ||||| | ||||| |||||||
Sbjct 11344 CACCCGGCGTCGAACTCCAGCCGGCCGTTATGGATCACGTCATAGGCCTTCAGCACCAG- 11286
Query 8611 GCG-GTTTTCATTTCCGGCGTGTAGCGGATATCGCGTGCGGCGGGATAGAACGAGCGAAC 8669
||| ||||| | ||| |||| |||| || | | || || ||||| ||| ||
Sbjct 11285 GCGTGTTTTGACTTCGGGCGAATAGCTGAAGGTGGTCACAGCCGGGAAGAACTGGCGCAC 11226
Query 8670 GAGCTGGAACACGCCGACACCGAGGCCGGTGGCATCAATTCCGATGTATTCGACGTTGTA 8729
||||| ||||||| ||| || |||||| ||||||| ||||| || || |||
Sbjct 11225 CAGCTGCGCCACGCCGCTACCCAGCCCGGTGACATCAATCCCGATATAGGTCACCCAGTA 11166
Query 8730 TTTTTCGGTGAGTTTGCGGATGGATTCAGCCTGGGTGGCAAAGTCCATGCCTTTCCACTG 8789
||| || || ||| || | ||||||| |||||||||||||| | ||
Sbjct 11165 GCGGTCGCAGACGTTTTTGATAAATGCCGCCTGGGCCGCAAAGTCCATGCCCCGGAATTG 11106
Query 8790 GTGACGCTCAAGTATTCTGAATTTGCCACCGGCCACCACCGGCGGTGCCAGCACCACGCA 8849
||| ||||| || | | ||||||||| || | |||| |||||| || | ||||||
Sbjct 11105 GTGCCGCTCCAGGACGCGGAATTTGCCGCCCGGTACCAGCGGCGGCGCAACCACCACCAG 11046
Query 8850 TCCGGCACTGTCGCCACGGTGT--GACGGGTCGTAACCAATCCAGACCGGGCGGGAGCCG 8907
|||| | || || ||| | | |||||||| || ||||| ||| | ||| |||
Sbjct 11045 CCCGGAGCAATCACC--GGTTTCCGCTGGGTCGTAGCCGATCCATACCTGACGGTCACCG 10988
Query 8908 AACGGATTCGCGGCAAACGGCGCATAGTCTTC---CCATTCTTCCAGCGTGTCGACCATG 8964
||||| | ||| || ||| ||||| || |||||| || |||||||||||
Sbjct 10987 AACGGCCGCATGGCGAATGGCTTGTAGTCCTCTGCCCATTCAACCCAACTGTCGACCATG 10928
Query 8965 CAGCGTTGCAGCTCCTCGAACGGGAACA--CCGACGCCTTGTCGTCAACAAATTCACACA 9022
|||| |||||| | | ||||| || | | | | || | |||||||||| |||||||
Sbjct 10927 CAGCTCTGCAGCAACGCCAACGGAAAGATGCTGGCTCCAT--CGTCAACAAACTCACACA 10870
Query 9023 TGAACAGGTTTTTAAAATCGTCGGCGCTGTTTTCGCGTTTAAGCTGCTCAATGTCGAACA 9082
| |||||||| || | || | ||||| || || | || ||||||||||||||
Sbjct 10869 TCAACAGGTTGGCGAACGCCTCAGGGCTGTACTCCCGACGCAACTCCTCAATGTCGAACA 10810
Query 9083 GCGTGCAGCCACCTTTCAGGGCGTCCTCAATGGTGACAATCTGCCGCCACTGACCGTCCG 9142
| ||||| || | | |||||| |||||||| |||||||||||| | ||||
Sbjct 10809 GATCACAGCCGCCGTGCTCTGCGTCCAGGATGGTGACGATCTGCCGCCACAACCGGTCCT 10750
Query 9143 CACAGAGAAGCCCACCGGCAAGAGCG--TTATGACTGACGTCGATTTCCACGCGTTCGGC 9200
| | |||| | | || | ||||| || ||||||| | | ||| ||
Sbjct 10749 CGC--AGAACCGCCCCTGTTGGAGCGCCCCGTGGGAAACGTCGACCTTGGTGTGTT--GC 10694
Query 9201 GGCGCTGGCGCGTCCCCGGTTGAACAGTTCACCCGACCAGAACGGGTAGGCGTCGTGCGC 9260
| ||||||| ||| |||||| | || || | |||||| | |||||| || || ||
Sbjct 10693 GCCGCTGGC-TTACCCTTGTTGAAGCGCTCGCCGGTCCAGAAGGTGTAGGCCTCATGGGC 10635
Query 9261 CAGCGTGGACGGGGTGGAGAAATAGGTCGAGCGCAGGTGACTCTGTGAGGCCATACCTGA 9320
|| ||||||| || ||||| ||||| |||| | | || |||||| || ||
Sbjct 10634 CATGCTGGACGGCGTCGAGAAGTAGGTTTTGCGCCACTTCTTGTGCATGGCCATGCCCGA 10575
Query 9321 TGCCACCTTACGCAGTACCTGAAAATTCGGTATCCAGAAAATCTCGTCGACGTACAGGTC 9380
|| ||||| |||| ||| ||| || ||||||| | ||||||| ||| | |
Sbjct 10574 AGCGACCTTGTTCAGTTCCTCAAACTTGAACGTCCAGAAGAATTCGTCGAAGTAGAAATT 10515
Query 9381 GCCGTTATGGCTCTGCGCGGTGTTGGAGTTGGTGCCGAGAAAAATCAGTTTTGCGCCGTT 9440
||||| | || ||| ||||| | ||||| ||||| |||| ||| | ||||||
Sbjct 10514 GCCGTGGTAGCCCTGGGCGGTACGCGCATTGGTACCGAGGAAAAACAGCTCGGCGCCG-- 10457
Query 9441 ATTGCCCAGGACAATCGGGTCACCGGTCAG---GTCAACGTCAACCAGCCGGGCAAAGGC 9497
||| || || || || || || ||||| | || || |||| |||||||| ||
Sbjct 10456 -TTGGGCAATACGATGGGATCCCCCGTCAGCTCGACACCGATAACCTCACGGGCAAATGC 10398
Query 9498 GATGATGTATTCGCGGAACACATACGCCTGCGTTTTACTGGCCGACAGAAAAATCTGGTT 9557
|||||| |||| |||| ||| || || |||| || ||||| || ||||| ||
Sbjct 10397 CTGGATGTACCCGCGAAACAGATAGGCTTGGTTTTTCGATGCGGACAGGAAGATCTGATT 10338
Query 9558 ATGACCGGTTTTCAGGGCGCGCAGCAGCGCCTCGCGGGAAAAATAAAACGTCGCGCCAAT 9617
| ||||||| ||| || || | ||||||||||| ||| ||| | |||||||| ||
Sbjct 10337 GCGCCCGGTTTCCAGCGCATCAAGAAACGCCTCGCGGGCAAAGTAATAGGTCGCGCCGAT 10278
Query 9618 CTGGCGGGATTTCAGGATATCGCGGATGCGGTGCT--CAAGCCCGGCGCGATACCAGTGC 9675
||| ||| ||| ||||| |||| | || || | | ||||||| |||||||
Sbjct 10277 CTGCCGGCTTTTGAGGATGACGCGAGTCCGTTGATTGCCAGCCCGG-----TACCAGTCT 10223
Query 9676 AACTGATATTCGAAAGACTGCTCAAAGAAAATCTGCTC-CAGCTTTTCGATAGCCTCGTC 9734
||| || |||||| | || | ||| || | | || | ||||| ||| ||
Sbjct 10222 TTCTGGTAGTCGAAACAGCCGTC-GATAAACGCTTCACGCAACAGCTCGATCTGCTCTTC 10164
Query 9735 ACTGAAAAAATTCTTTTTCGGT-TTGCGCCGCCCGCCTTTGTTGCGGTTAGCGATGTTCG 9793
|||| | || |||| ||| || | | || | |||||| ||||| | ||| |
Sbjct 10163 GCTGATATCGTT-TTTTGGGGTCTTTTTCTTCGGACCCTCGTTGCGTTTAGCCAGGTTAG 10105
Query 9794 GATTAAGGTCTGCCTCGTTGCCGGTCTGGCTG-TAGCGGTTTACCCGTGCCAGTCGTTCA 9852
| || || || | ||| | || | | ||| |||| | | | ||| | |||||
Sbjct 10104 GGTTGAGCTCGGTTTCGGTACC-GCCGCCCTGAAAGCGCTGAATTCTGGCCTGGCGTTCC 10046
Query 9853 ATCTGGCGTCCGAGCAGGTCAATTTCCTTGAAGTCACCGCCGGTTTTCTGCGGT--TTGA 9910
| ||||| ||||| ||||||||||||||||| |||||| | | ||| | ||||
Sbjct 10045 AATTGGCGGTGCAGCAGATCAATTTCCTTGAAGTCCCCGCCGCTCT--TGCTTTCCTTGA 9988
Query 9911 TGATGAGCTGGGTCAGCCGCGCTTCCAG 9938
||| ||||| || ||||||||||||
Sbjct 9987 GGATCAGCTGCACCAACCGCGCTTCCAG 9960
Score = 170 bits (188), Expect = 3e-38
Identities = 217/299 (73%), Gaps = 0/299 (0%)
Strand=Plus/Minus
Query 11874 ATTGAACCGTGGTATCAGGAAGACCCTGACCTTGTGGTGATTGTGGGACGTCAGCTACTG 11933
|||| |||||||| |||||||||||||| || |||||||| || || || || |||
Sbjct 8111 ATTGCGCCGTGGTACCAGGAAGACCCTGATCTGGTGGTGATCTGCGGTCGCCAACTGCTG 8052
Query 11934 GCGGACAAGTATTTCCCCATCGTTAACAAGGAGCAGGACAACAGCGAGATGCTGGCCGCT 11993
|| |||||||||||||| ||| | ||||| || | | | || |||||||||||
Sbjct 8051 GCCGACAAGTATTTCCCGATCATCAACAAAGACAACGCGCCGACTGAAATGCTGGCCGCC 7992
Query 11994 GACGTCATTATCAGCCAGAAACGCATCGGCAACCTGCCGGCGGTACGCGTCCCGTACTTC 12053
|| || | | ||| || || ||| | ||||| |||| || || ||||| || ||||||
Sbjct 7991 GATATCGTCACCAGTCAAAAGCGCTTGGGCAATTTGCCAGCCGTGCGCGTGCCTTACTTC 7932
Query 12054 CCGGCGGATGCGATGCTCATCACGAAGCTGGAAAACCTGTCCATCTACTACATGGATGAC 12113
||| || | | |||| |||| ||||||||||||||||| ||||||| ||| | |
Sbjct 7931 CCGCCGCGCGGGTTGCTGGTCACCAAGCTGGAAAACCTGTCGATCTACTGGCAGGAAGGC 7872
Query 12114 AGCCATCGCCGCGTGATTGAGGAAAACCCGAAACTCGACCGCGTGGAGAACTACGAGTC 12172
|||| |||||| | | || || | || | |||||| | || |||||||||||
Sbjct 7871 AGCCGCCGCCGCACCGTCGTCGACAATGCCAAGCGTGACCGCATCGAAAACTACGAGTC 7813
Score = 138 bits (152), Expect = 2e-28
Identities = 247/361 (68%), Gaps = 6/361 (2%)
Strand=Plus/Minus
Query 18550 AGCTGTGGAACCCGGACACCTGCCCGGCAAATCTGCTGCCGTGGCTGGCGTGGTCATTTT 18609
|||| || || || ||| | |||||| | |||||||| | ||||| ||| | || |
Sbjct 1096 AGCTTTGCAATCCCGACGCTTGCCCGCTGGAGCTGCTGCCATACCTGGCCTGGGCCTTCT 1037
Query 18610 CGGTTGACCGCTGGGATGATAAGTGGCCGGAAGCGACAAAACGCGCTGTTATCCGCGATG 18669
||||||| |||||||| || ||||| ||||| | ||||| | | || ||
Sbjct 1036 CGGTTGATCGCTGGGACAGCAAATGGCCTGAAGCCGCGAAACGGTCGGCCATTCGATCAT 977
Query 18670 CGTATTTCATTCACTGCCATAAGGGCACTATTGGTGCGATTCGCCGTGTGGTGGAGCCGC 18729
| | ||||| |||| | ||||||||| || || || | || || ||||| || |||
Sbjct 976 CCCACTTCATCCACTCGCGTAAGGGCACCATCGGAGCCCTACGACGCGTGGTCGAACCGT 917
Query 18730 TCGGCTATCTGATTGAGGTGAGGGAGTGGTGGCA------GCTCAACGAGGAGCCGGGGA 18783
| || ||||||||||| ||| ||||||||||| || |||| | ||| || |
Sbjct 916 TGGGGTATCTGATTGAAGTGCTTGAGTGGTGGCAAACCACGCCGAACGGTGTGCCAGGTA 857
Query 18784 CGTTCCGCATCGTTGTTGGCGTGCTTGAGCAGGGTATTACCGAGGAAATGTATCAGGAGC 18843
| ||| ||| || || ||||| || || || |||||||||||||| |||||||
Sbjct 856 CATTCGCAATCAAGGTGGGTGTGCTCGAAACCGGCATAACCGAGGAAATGTACCAGGAGC 797
Query 18844 TGGAGCGTCTCGTTGCTGATGCAAAACCTGCAAGCCGCCATCTGACGGGACTGGCTATCA 18903
|| | ||| | | || || | || | | ||| || ||||| || ||||||||||
Sbjct 796 TGACCTGGCTCATCGACGACGCCAGGCCAGTCACCCGACACCTGACCGGCCTGGCTATCA 737
Query 18904 G 18904
|
Sbjct 736 G 736
Score = 104 bits (114), Expect = 4e-18
Identities = 219/321 (68%), Gaps = 8/321 (2%)
Strand=Plus/Minus
Query 7556 AAATCGTCCTTCGTTGCCACTTCACTGAGCGGGATAATTTTAATGCCGTCGG-CTTTCCC 7614
|| || ||||| | ||||| ||||||| |||||| | | || ||||| ||| ||
Sbjct 12324 AATTCATCCTTGGCCGCCACCTCACTGACCGGGATCAGCTGTATCCCGTCCTTCTTGCCG 12265
Query 7615 CTGCGGGGCATAGAGAAACAGATTTTTAAAGTTGTTGCGGCCTTTCGA---CTTGACCAT 7671
|| || | ||| | ||||| || ||| ||| | || || || ||||| |
Sbjct 12264 GTG-GGCGAATACACAAACAAGTTGCGAAAATTGCCTGGCCCCTTGGAGTCCTTGAG-AG 12207
Query 7672 GTTTTCGCGAAGCATTTCGATATCGTTGCGATCCTGCACGGCATCGGTGACGTACATGAT 7731
|| ||| |||| | |||||||| | | ||| |||||||||| | ||| | ||
Sbjct 12206 CCTTGCGCAAAGCGT--CGATATCGGTTTCAGTCTGTGCGGCATCGGTCATGTAGAGAAT 12149
Query 7732 ATATCCGGCATGAGCGCCGTTTTCGTAATACTTGCGGCGGAACAGCGTGGCCGACTCATT 7791
| ||||| ||| ||| || ||||| |||||||||||||||| ||||||||| || ||
Sbjct 12148 GAAGCCGGCGTGACTGCCATTCTCGTAGTACTTGCGGCGGAACAACGTGGCCGATTCGTT 12089
Query 7792 CAGCCAGGCAGAATTAAGGGCGCTGAGATATTCCGGCAGGCCGTACAGCTCCTGATTAAT 7851
||| | || || | | ||| || | | ||||||| ||| || | |||||| | |
Sbjct 12088 GAGCAACGCCGACTGCAAGGCACTAATCCACTCCGGCAAGCCATAAATCTCCTGGTGCAA 12029
Query 7852 ATCCGGCTCCAGCAGGTGAAA 7872
||||| || |||| |||||
Sbjct 12028 ATCCGCTTCTCGCAGATGAAA 12008
>seq3088488
Length=17142
Score = 352 bits (390), Expect = 5e-93
Identities = 781/1154 (68%), Gaps = 42/1154 (4%)
Strand=Plus/Minus
Query 22515 GACTATCATCACGGCGTGCAGGTGCTGGAGATTAACGACGGCACCCGCGTCATTTCCACC 22574
|| |||| |||||||||| ||| | || | ||||||||||||||| |||| |||
Sbjct 16622 GATTATCTCCACGGCGTGCGGGTCATCGAACTCAACGACGGCACCCGCCCCATTCGCACT 16563
Query 22575 GTATCCACTGCCATTGTCGGCATGGTCTGCACGGCCAGCGATGCGGATGCGGAAACCTTC 22634
| |||| || | |||||||||| ||||| || |||||||| | |||
Sbjct 16562 ATTCCCACCGCAGTCATCGGCATGGTTTGCACCGCTGAAGATGCGGACCCACTCGTTTTC 16503
Query 22635 CCCCTCAATAAACCTGTGCTGATTACCAATGTGCAGAGCGCAATTGCAAAGGCCGGTAAA 22694
|| || | | || || || || ||||| ||||| | ||| | | ||||||||
Sbjct 16502 CCTCTGGACACTCCAGTCCTCATCACCAACGTGCAAACCGCCGTCGGCAAGGCCGGCGTC 16443
Query 22695 AAAGGCACTCTGGCGGCATCGTTGCAGGCCATCGCCGACCAGTCAAAACCGGTCACAGTT 22754
|| ||||| ||||| || |||| | ||||||||||||| | || || | || |||
Sbjct 16442 AAGGGCACCCTGGCTGCCAGCCTGCAAGGCATCGCCGACCAGACCAAGCC--TTAC-GTT 16386
Query 22755 GTCGTG---CGTGTGGAAGACGGCACCGGCGACGACGAGGAA-ACGAAACTCGCGCAGAC 22810
||||| || || |||| ||| | | ||| | ||| || |||| ||| | ||
Sbjct 16385 ATCGTGGTACGGGTCAAAGAAGGCGCTGACGAAG-CGACGACTACGAG---CGCCCTGA- 16331
Query 22811 CGTTTCCAATATCATCGGCACCACCGACGAAAACGGTCAGTACACCGGACTGAAAGCCCT 22870
|| | || || |||| || |||||| |||||||| ||||||| ||
Sbjct 16330 --TTGGCGGTA-------CAACACCAAC-----CGGTCAATACACCGGCATGAAAGCTCT 16285
Query 22871 GCTGGCGGCAGAGTCGGTAACCGGTG----TTAAACCGCGTATTCTCGGAGTGCCGGGAC 22926
||| || || | || || ||| | | |||||||| || || ||||| || |
Sbjct 16284 GCTCGCAGCCAAATC----ACGCGTGGGCATGACTCCGCGTATCCTTGGCGTGCCAGGCC 16229
Query 22927 TGGACACCAAAGAGGTGGCTGTTGCACT-GGCATCAGTCTGTCAGA-AGCTGCGCGCTTT 22984
| |||| || || || || ||| || || | || | | |||||||| ||
Sbjct 16228 TCGACAGTTTGCCAGTAGCCACCGCCCTCGGCGCCA-TC-GCCAAAGACCTGCGCGCCTT 16171
Query 22985 CGGGTATATCAGCGCATGGGGCTGTAAAACCATTTCCGAGGTGAAAGCCTACCGTCAGAA 23044
| || | ||||| ||| ||| ||||||| ||||| || ||||| ||||
Sbjct 16170 TGCATACGTAAGCGCCTGGAACTGCAAAACCAAGGAAGAGGTAGTGGCGTACCGCGAGAA 16111
Query 23045 TTTCAGCCAGCGTGAGCTGATGGTCATCTGGCCGGATTTCCTCGCATGGGATACGGTCAC 23104
||| | || || ||||||| || |||||||| ||||| ||||| || |||||
Sbjct 16110 CTTCGGTGCCCGCGAAATGATGGTGATTTGGCCGGACTTCCTGAACTGGGACACTGTCAC 16051
Query 23105 GAGTACCACCGCCACCGCGTATGCCACTGCCCGTGCGCTGGGACTGCGTGCCAAAATCGA 23164
| | ||||||| ||| | ||| ||||| || || || || || ||||| |||||
Sbjct 16050 CAACAAGACCGCCAGCGCTTCGGCCGTGGCCCGCGCCCTCGGCCTTCGCGCCAAGATCGA 15991
Query 23165 CCAGGAGCAGGGCTGGCATAAAACGCTGTCCAACGTCGGGGTAAACGGTGTTACCGGCAT 23224
||| ||| ||| ||||||||||| ||||||||||| | || | || || ||||| ||
Sbjct 15990 CCAAGAGACGGGTTGGCATAAAACCCTGTCCAACGTGGCCGTGAGTGGCGTGACCGGTAT 15931
Query 23225 CAGCGCATCTGTATTCTGGGATTTGCAGGAGTCCGGCACCGATGCTGACCTGCTGAACGA 23284
|||||| || ||||||||| |||| | | | |||||| || || || ||| |
Sbjct 15930 CAGCGCCGACGTGTTCTGGGATCTGCAAAACCCAGCCACCGACGCCAACTACCTCAAC-A 15872
Query 23285 GTCAGG-CGTCACAACGCTGATTCGTCGTGA-CGGTTTCCGCTTCTGGGGTAACCGTACC 23342
| | | |||||| || ||||| | || | |||||| ||||||||||||| ||| |||
Sbjct 15871 GCAACGACGTCACCACCCTGAT-CAACGCCAACGGTTTTCGCTTCTGGGGTAGCCGCACC 15813
Query 23343 TGCTCTGATGACCCGCTGTTCCTCTTTGAAAACTACACCCGCACCGCGCAGGTGCTGGCC 23402
||| |||||||||| ||||| ||| |||||||||||||||||||||||| | || ||
Sbjct 15812 TGCAGTGATGACCCGTTGTTCGCCTTCGAAAACTACACCCGCACCGCGCAGATCCTCGCG 15753
Query 23403 GACACGATGGCTGAGGCGCACATGTGGGCGGTGGACAAGCCCATCACCGCAACGCTGATT 23462
||||| |||| || |||||||||||||| || ||| || || ||| | ||| |
Sbjct 15752 GACACCATGGGCGAAGCGCACATGTGGGCAGTTGACCGCCCTATGCACGCCTCCCTGGTA 15693
Query 23463 CGCGACATCGTTGACGGCATCAATGCCAAATTCCGTGAGCTGAAAACAAACGGCTATATC 23522
|||||| | || || ||| | | ||||| | || ||| ||||| | | ||||| |
Sbjct 15692 CGCGACCTGGTCGAAGGCGTAAGCGCCAAGATGCGCGAGTTGAAATCCCAGGGCTACCTG 15633
Query 23523 GTGGATGCGACCTGCTGGTTTAGCGAAGAATCCAACGATGCGGAAACCCTCAAGGCCGGA 23582
| | | | |||||| || || |||| || ||||||||||||||
Sbjct 15632 ATCGGCGGCAGTTGCTGGAACCCGGACGACATCAACACCAAAGACACCCTCAAGGCCGGC 15573
Query 23583 AAACTGTATATCGACTATGACTATACACCGGTGCCTCCTCTCGAAAACCTGACCCTGCGC 23642
|| || | | || || ||||| || || ||||| || || ||| |||| ||| | |||
Sbjct 15572 AAGCTCTGGCTTGATTACGACTACACCCCCGTGCCGCCACTTGAAGACCTCACCTTCCGC 15513
Query 23643 CAGCGTATCACCGA 23656
||||| ||||||||
Sbjct 15512 CAGCGAATCACCGA 15499
>seq3084702
Length=3045
Score = 167 bits (184), Expect = 4e-37
Identities = 261/368 (71%), Gaps = 8/368 (2%)
Strand=Plus/Minus
Query 18544 TTCGTGAGCTGTGGAACCCGGACACCTGCCCGGCAAATCTGCTGCCGTGGCTGGCGTGGT 18603
|||| || || | ||| | || |||||||||| || |||||||| ||||| |||
Sbjct 2912 TTCGCGACCTCTACAACGCTGATACCTGCCCGGTGCATTTGCTGCCGCATCTGGCCTGGG 2853
Query 18604 CATTTTCGGTTGACCGCTGGGATGATAAGTGGCCGGAAGCGACAAAACGCGCTGTTATCC 18663
| | ||||| || ||||||||| | ||| | || ||||| || || || | |||
Sbjct 2852 CTTGGTCGGTGGATCGCTGGGATTACCGATGGACAGAGGCGACCAAGCGTGCCGCCATCA 2793
Query 18664 GCGATGCGTATTTCATTCACTGCCATAAGGGCACTATTGGTGCGATTCGCCGTGTGGTGG 18723
| | |||| ||| || ||| ||||| ||||| || || | || |||||||| |
Sbjct 2792 AGGCCTCTTATTACATCCATGCCCACAAGGGAACTATCGGCGCCTTGCGTCGTGTGGTTG 2733
Query 18724 AGCCGCTCGGCTATCTGATTGAGGTGAGGGAGTGGTGGCA-GCTCAAC--GAGGA---GC 18777
|||| || ||||| |||||||| | | ||||||| | ||| | |||| ||
Sbjct 2732 AGCCTCTGGGCTACCTGATTGAAATCATCGAGTGGTTTAACGCTGTGCCCGAGGGCACGC 2673
Query 18778 CGGGGACGTTCCGCATCGTTG-TTGGCGTGCTTGAGCAGGGTATTACCGAGGAAATGTAT 18836
| ||||| || || | | | |||||||| ||| ||||| ||||| || ||||||
Sbjct 2672 CAGGGACATTT-GCGTTGAAGGTTGGCGTGAGTGATTCCGGTATCACCGAAGAGATGTAT 2614
Query 18837 CAGGAGCTGGAGCGTCTCGTTGCTGATGCAAAACCTGCAAGCCGCCATCTGACGGGACTG 18896
|||||||||||||| || || | ||| || || |||| ||||||||| ||||||| |||
Sbjct 2613 CAGGAGCTGGAGCGGCTGGTCGATGACGCCAAGCCTGTAAGCCGCCACTTGACGGGGCTG 2554
Query 18897 GCTATCAG 18904
||||||||
Sbjct 2553 GCTATCAG 2546
>seq2959876
Length=477
Score = 145 bits (160), Expect = 1e-30
Identities = 243/350 (69%), Gaps = 20/350 (6%)
Strand=Plus/Minus
Query 18544 TTCGTGAGCTGTGGAACCCGGACACCTGCCCGGCAAATCTGCTGCCGTGGCTGGCGTGGT 18603
|||| || || | ||| | || |||||||||| | || |||||||| ||||| |||
Sbjct 344 TTCGCGACCTCTACAACGCTGATACCTGCCCGGTACATTTGCTGCCGCATCTGGCATGGG 285
Query 18604 CATTTTCGGTTGACCGCTGGGATGATAAGTGGCCGGAAGCGACAAAACGCGCTGTTATCC 18663
||| ||||| || ||||||||| | ||| | || ||||| |||||||| | |||
Sbjct 284 CATGGTCGGTGGATCGCTGGGATTACCGATGGACCGAGGCGACCAAACGCGCCGCCATCA 225
Query 18664 GCGATGCGTATTTCATTCACTGCCATAAGGGCACTATTGGTGCGATTCGCCGTGTGGTGG 18723
| | |||| ||| || ||| |||||||| || || ||| | ||||||||||| |
Sbjct 224 AGGCCTCTTATTACATACATGCCCACAAGGGCACCATCGGCGCGTTACGCCGTGTGGTAG 165
Query 18724 AGCCGCTCGGCTATCTGATTGAGGTGAGGGAGTGGTGGCAGCTCAAC--GAGGAGCCG-- 18779
|||| || ||||| ||||| ||| | | ||||||| ||||| |||| |||
Sbjct 164 AGCCTCTGGGCTACCTGATCGAGATTATCGAGTGGT------TCAACATGAGG-CCCGAA 112
Query 18780 GGGACGTTCCGCATCGTT---------GTTGGCGTGCTTGAGCAGGGTATTACCGAGGAA 18830
||||| ||| | || || || ||| | || ||||| || ||||||
Sbjct 111 GGGACCCCAGGCACCTTTGCGTTAAAGGTCGGGGTGTTGGACACCGGTATCACTGAGGAA 52
Query 18831 ATGTATCAGGAGCTGGAGCGTCTCGTTGCTGATGCAAAACCTGCAAGCCG 18880
|||||||||||||||||||| || ||| ||| || || || | |||||
Sbjct 51 ATGTATCAGGAGCTGGAGCGGCTGATTGATGACGCCAAGCCCGTCAGCCG 2
>seq3088487
Length=16894
Score = 118 bits (130), Expect = 2e-22
Identities = 240/354 (68%), Gaps = 8/354 (2%)
Strand=Plus/Minus
Query 18558 AACCCGGACACCTGCCCGGCAAATCTGCTGCCGTGGCTGGCGTGGTCATTTTCGGTTGAC 18617
|||||||| || ||||||||| |||| | | |||| ||| | | ||||||||
Sbjct 13092 AACCCGGATACGTGCCCGGCAGGCTTGCTTCACCAGTTGGCCTGGGCCTGGTCGGTTGAT 13033
Query 18618 CGCTGGGATGATAAGTGGCCGGAAGCGACAAAACGCGCTGTTATCCGCGATGCGTATTTC 18677
|||||||| | || ||| |||| || | || || || | ||| ||| |||| | |
Sbjct 13032 CGCTGGGACAACAACTGGTCGGAGGCAATCAAGCGTGCGGCTATACGCTCGGCGTTCTAC 12973
Query 18678 ATTCACTGCCATAAGGGCACTATTGGTGCGATTCGCCGTGTGGTGGAGCCGCTCGGCTAT 18737
| || ||| |||||||| || || || | || ||||| || || || | || ||
Sbjct 12972 GTACATACCCACAAGGGCACCATCGGCGCTCTGCGGCGTGTCGTCGAACCTTTGGGTTAC 12913
Query 18738 CTGATTGAGGTGAGGGAGTGGTGGCA------GCTCAACGAGGAGCCGGGGACGTTCCGC 18791
||||| || || |||||||||||| || || | | ||||| || || ||
Sbjct 12912 CTGATCGAAGTTCAGGAGTGGTGGCAGACCACGCCAAAGGGCGTTCCGGGCACCTT-TGC 12854
Query 18792 ATCG-TTGTTGGCGTGCTTGAGCAGGGTATTACCGAGGAAATGTATCAGGAGCTGGAGCG 18850
| | || |||||||| || ||| ||||||||||| |||||||| || || |
Sbjct 12853 GTTGAAGGTGGGCGTGCTGGAAACGGGCATTACCGAGGAGATGTATCAAGAACTCACATG 12794
Query 18851 TCTCGTTGCTGATGCAAAACCTGCAAGCCGCCATCTGACGGGACTGGCTATCAG 18904
|| ||| ||| || ||||| | || || ||| ||||||| ||||||||||
Sbjct 12793 GCTAATTGATGACGCCAAACCAGTCAGTCGGCATATGACGGGCTTGGCTATCAG 12740
>seq3063309
Length=1409
Score = 107 bits (118), Expect = 3e-19
Identities = 206/298 (69%), Gaps = 8/298 (3%)
Strand=Plus/Minus
Query 9350 GTATCCAGAAAATCTCGTCGACGTACAGGTCGCCGTTATGGCTCTGCGCGGTGTTGGAGT 9409
||||||| ||| ||| |||||||| | || ||| | | || ||| |||||| || |
Sbjct 294 GTATCCAAAAATACTCATCGACGTAGACGTGGCCATGGTAGCCCTGGGCGGTGCTGCTAT 235
Query 9410 TGGT-GCCGAGAAAAATCAGTTTTGCGCCGTTATTGCCCAGGACAATCGGGTCACCGGTC 9468
|||| | | ||||| ||| | |||||||| || | || |||||| ||||||
Sbjct 234 TGGTCGACAAGAAACG-CAGCTCGGCGCCGTTGCTGAGCGTGA---TCGGGTTGCCGGTC 179
Query 9469 AGGTCAACGTC-AACCA--GCCGGGCAAAGGCGATGATGTATTCGCGGAACACATACGCC 9525
|| || | ||| ||||| || ||||| ||||||||| |||||| | | || |
Sbjct 178 AGCTCGATGTCGAACCACTGCTTTGCAAACTGGATGATGTAACTGCGGAAAATTTCCGAC 119
Query 9526 TGCGTTTTACTGGCCGACAGAAAAATCTGGTTATGACCGGTTTTCAGGGCGCGCAGCAGC 9585
|||| ||||||||||| || | |||||| | ||||| || |||| || | |
Sbjct 118 TGCGAGCGGCTGGCCGACAGGAACACCTGGTTGTCGCCGGTCAGCACGGCGTCCATGAAC 59
Query 9586 GCCTCGCGGGAAAAATAAAACGTCGCGCCAATCTGGCGGGATTTCAGGATATCGCGGA 9643
|| |||| || || || ||||| ||| | ||||||| ||||||||| | |||||
Sbjct 58 GCTTCGCCGGCGAAGTAGTACGTCAGGCCCACCTGGCGGCTTTTCAGGATGTTGCGGA 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 90103172715600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |