Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09]
3,088,511 sequences; 2,785,377,831 total letters
Query= NC_028999.1
Length=309208
Score E
Sequences producing significant alignments: (Bits) Value
seq501696 98.7 2e-15
seq240294 96.9 7e-15
>seq501696
Length=102
Score = 98.7 bits (108), Expect = 2e-15
Identities = 70/79 (89%), Gaps = 1/79 (1%)
Strand=Plus/Plus
Query 294859 TATGGTGCCGTCAGAGGGATTCGAACCCGTCGACCTACTGATTACAAGTCAGTTGCTCTA 294918
|||||||||| || ||| ||||||||| |||||||||||||||||||||||||||||
Sbjct 1 TATGGTGCCGGCACCAGGAGTCGAACCCGG-GACCTACTGATTACAAGTCAGTTGCTCTA 59
Query 294919 CCAGCTGAGCTATAACGGC 294937
||| |||||||||| ||||
Sbjct 60 CCAACTGAGCTATACCGGC 78
>seq240294
Length=15375
Score = 96.9 bits (106), Expect = 7e-15
Identities = 70/80 (88%), Gaps = 1/80 (1%)
Strand=Plus/Minus
Query 294858 ATATGGTGCCGTCAGAGGGATTCGAACCCGTCGACCTACTGATTACAAGTCAGTTGCTCT 294917
||||||||||| || ||| ||||||||| ||||||||||||||||||||||||||||
Sbjct 3765 ATATGGTGCCGGCACCAGGAGTCGAACCCGG-GACCTACTGATTACAAGTCAGTTGCTCT 3707
Query 294918 ACCAGCTGAGCTATAACGGC 294937
|||| |||||||| | ||||
Sbjct 3706 ACCAACTGAGCTAAACCGGC 3687
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 950184907106183
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |