Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09]
3,088,511 sequences; 2,785,377,831 total letters
Query= NC_029003.2
Length=29733
Score E
Sequences producing significant alignments: (Bits) Value
seq3088503 347 2e-91
seq3088488 331 2e-86
seq3063309 163 5e-36
seq2959876 113 8e-21
seq3084702 93.3 8e-15
>seq3088503
Length=21467
Score = 347 bits (384), Expect = 2e-91
Identities = 1029/1556 (66%), Gaps = 43/1556 (3%)
Strand=Plus/Minus
Query 1291 AAGCGGTTCGTTTAACAGGGCGTGCATGGTGGCCCATGCGATATCAGCGTGGCTGGCTTC 1350
||||||||||||| || ||||| | ||||| || | || || |||| || |
Sbjct 11492 AAGCGGTTCGTTTTGCAATGCGTGAAATAGCGCCCAGGCCAGGTCGGCATGGCCGGTGTT 11433
Query 1351 CTCGGTGCGACTGGCCTCATAGGTGGCGCTGCGCCCGC-TGCTGGTCATGGTTTTGCGGA 1409
||| |||| | || |||||| ||| |||| ||| ||| | || |||||||
Sbjct 11432 GTCGTTGCGCCCTGCGGTGTAGGTGTACTGGCGACCGCCTGC-GGTGACCGTCTTGCGGA 11374
Query 1410 TGGACATAAACGACTGTGTGACATCAGTTGCTCCGGCGTCGTACTCCAGACAGCCACGGC 1469
| | ||| | |||||| | | || || ||||||||| ||||||| | |||
Sbjct 11373 TCGCCATCATCGACTGCGCCATGTCGGTCCACCCGGCGTCGAACTCCAGCCGGCCGTTAT 11314
Query 1470 GAATCGTGTCTTTCGCCTTGAGCACCATTGCG-GTTTTCATTTCTGGCGTGTAACGGATA 1528
| ||| ||| | ||||| ||||||| ||| ||||| | ||| |||| || | ||
Sbjct 11313 GGATCACGTCATAGGCCTTCAGCACCAG-GCGTGTTTTGACTTCGGGCGAATAGCTGAAG 11255
Query 1529 CCGCGTGCCGCCGGGTAGAATGAGCGCACCAACTGGAATACACCGAGACCGAGGCCTGTT 1588
| | |||||| |||| |||||||| ||| || ||| ||| || || ||
Sbjct 11254 GTGGTCACAGCCGGGAAGAACTGGCGCACCAGCTGCGCCACGCCGCTACCCAGCCCGGTG 11195
Query 1589 GCGTCAATGCCGATGTATTCGACGTTGTATTTCTCAGTGAGCCTGCGGATGGCTTCTGCC 1648
| ||||| ||||| || || ||| || || | ||| | | |||
Sbjct 11194 ACATCAATCCCGATATAGGTCACCCAGTAGCGGTCGCAGACGTTTTTGATAAATGCCGCC 11135
Query 1649 TGCGCGGCAAAGTCCATGCCTTTCCACTGGTGACGCTCCAGCATGCGAAACTTGCCACCC 1708
|| || |||||||||||||| | ||||| |||||||| | ||| || ||||| |||
Sbjct 11134 TGGGCCGCAAAGTCCATGCCCCGGAATTGGTGCCGCTCCAGGACGCGGAATTTGCCGCCC 11075
Query 1709 GAAACCACCGGCGGCGCGAGTACGACACATCCGGCACTGTCGCCGGTGTGGGACGGGTCG 1768
| |||| ||||||||| | || || |||| | || ||||| | | ||||||
Sbjct 11074 GGTACCAGCGGCGGCGCAACCACCACCAGCCCGGAGCAATCACCGGTTTCCGCTGGGTCG 11015
Query 1769 TAGCCAATCCAGACCGGGCGCGAGCCGAATGGATGGTCGGCGAACGGGGCGAAGTCCTC- 1827
||||| ||||| ||| | || ||||| || | |||||| || | |||||||
Sbjct 11014 TAGCCGATCCATACCTGACGGTCACCGAACGGCCGCATGGCGAATGGCTTGTAGTCCTCT 10955
Query 1828 --CCATGTTTCCATC--AC-GTCGACCATGCAGCGCTGCAGCTCCTCGAACGGGAATACC 1882
|||| || | | || |||||||||||||| ||||||| | | ||||| || |
Sbjct 10954 GCCCAT---TCAACCCAACTGTCGACCATGCAGCTCTGCAGCAACGCCAACGGAAAGAT- 10899
Query 1883 GATGCCTT-ATCGTCGACAAACTCGCACATAAACAGGTTCTTAAAGTCCTCATCACTGTT 1941
| || || |||||| |||||||| ||||| |||||||| || ||||| ||||
Sbjct 10898 GCTGGCTCCATCGTCAACAAACTCACACATCAACAGGTTGGCGAACGCCTCAGGGCTGTA 10839
Query 1942 TTCGCGTCTGAGCTGGTCGAGGTCGAACAGGGTGCAGCCACCGGCAAGGGCGTCCTCAAT 2001
|| || | | || || | ||||||||| ||||| ||| |||||| ||
Sbjct 10838 CTCCCGACGCAACTCCTCAATGTCGAACAGATCACAGCCGCCGTGCTCTGCGTCCAGGAT 10779
Query 2002 AGTGACAATCTGCCGCCACTGTCCGTCAGCGCAAAGAAGCCCACCGGC--GAGCGCGCTG 2059
||||| |||||||||||| | ||| |||| ||| | | || | |||||| | |
Sbjct 10778 GGTGACGATCTGCCGCCACAACCGGTCCTCGCA--GAACCGCCCCTGTTGGAGCGCCCCG 10721
Query 2060 TGACTGATGTCGATTTCGATGCGGTCAGCGGCACTGGCGCGCCCCTTGTTGAACAGCTCG 2119
|| | ||||| | | || | | ||| | ||||| ||| |||||||| |||||
Sbjct 10720 TGGGAAACGTCGACCTTGGTGTGTT--GCGCCGCTGGCTTACCC-TTGTTGAAGCGCTCG 10664
Query 2120 CCAGACCAGAAGGGGTAAGCGCCGTGCGCCAGCGTGGAAGGTGTCGAAAAGTAAGTTGAG 2179
|| | |||||||| ||| || | || |||| |||| || ||||| ||||| ||| |
Sbjct 10663 CCGGTCCAGAAGGTGTAGGCCTCATGGGCCATGCTGGACGGCGTCGAGAAGTAGGTTTTG 10604
Query 2180 CGCAGATGCTTTTGCGAGGCCATGCCCGATGCGACTTTGCGCAGCTTCTGAAAATTCGGG 2239
||| | ||| ||| |||||||||||| ||||| ||| ||| | || ||| ||
Sbjct 10603 CGCCACTTCTTGTGCATGGCCATGCCCGAAGCGACCTTGTTCAGTTCCTCAAACTTGAAC 10544
Query 2240 ATCCAGAATATTTCATCGACATACAGGTCGCCGTTATGGCTCTGTGCGGTGTTGGAATTG 2299
||||||| | ||| |||| || | | ||||| | || ||| ||||| | ||||
Sbjct 10543 GTCCAGAAGAATTCGTCGAAGTAGAAATTGCCGTGGTAGCCCTGGGCGGTACGCGCATTG 10484
Query 2300 GTGCCGAGAAAAATCAGCTTTGCGCCGTTGTTGCCGATGACAATCGGGTCGCCGGTCAGG 2359
|| ||||| |||| ||||| ||||||||| | | || || || || || || |||||
Sbjct 10483 GTACCGAGGAAAAACAGCTCGGCGCCGTTG--GGCAAT-ACGATGGGATCCCCCGTCAGC 10427
Query 2360 TCGA---CGTCAACCAGTCGCGCAAACTGGAT-GATGTATTCCCGGAACACGTAAGCCTG 2415
|||| || |||| || ||||| || | |||||| | || |||| || || ||
Sbjct 10426 TCGACACCGATAACCTCACGGGCAAA-TGCCTGGATGTACCCGCGAAACAGATAGGCTTG 10368
Query 2416 CGTTTTACTGGCCGACAGAAAAATCTGGTTATGGCCGGTCTTGAGCGCGCGCAGCAGTGC 2475
|||| || ||||| || ||||| || | ||||| | ||||| || | ||
Sbjct 10367 GTTTTTCGATGCGGACAGGAAGATCTGATTGCGCCCGGTTTCCAGCGCATCAAGAAACGC 10308
Query 2476 CTCGCGGGAAAAGTAGAACGTCGCGCCAATCTGGCGGGATTTGAGAATATCGCGAATACG 2535
|||||||| |||||| | |||||||| ||||| ||| |||||| || ||||| | ||
Sbjct 10307 CTCGCGGGCAAAGTAATAGGTCGCGCCGATCTGCCGGCTTTTGAGGATGACGCGAGTCCG 10248
Query 2536 GTGCGCCAGT-CCTGCCCGGTACCACTGCAACTGGTATTCGAAAGACTGGTCGAAGAAAA 2594
|| | | || ||||||||||| | |||||| |||||| | ||||| ||
Sbjct 10247 TTG----ATTGCCAGCCCGGTACCAGTCTTTCTGGTAGTCGAAACAGCCGTCGATAAACG 10192
Query 2595 TTTCTTCCAGCTTTGCGACAGCCTCATCGCTGAAAAAGTTCTTTTTCGGCCTCTTAC-GC 2653
||| || | ||| ||| ||||||| | ||| |||| || || || | |
Sbjct 10191 CTTCACGCAACAGCTCGATCTGCTCTTCGCTGATATCGTT-TTTTGGGGTCTTTTTCTTC 10133
Query 2654 TCCCCCTTGTTACGGTTGGCAACGTTGGGGTTAAGGTCGGCCTCGTTGCCGGTCTGGCTG 2713
|||| ||| || || || | ||| ||||| || |||| ||| | || | | |||
Sbjct 10132 GGACCCTCGTTGCGTTTAGCCAGGTTAGGGTTGAGCTCGGTTTCGGTACC-GCCGCCCTG 10074
Query 2714 -TAGCGGTTGACGCGCGCCAGTCGCTCAATCTGCCGCCCGAGCAGGTCAATCTCTTTGAA 2772
|||| | | | ||| | || || | || || ||||| ||||| || |||||
Sbjct 10073 AAAGCGCTGAATTCTGGCCTGGCGTTCCAATTGGCGGTGCAGCAGATCAATTTCCTTGAA 10014
Query 2773 GTCGCCGCCTGACTTTTGC--GGCTTGGCGATGAGCTGAATCAGGCGCGCCTCAAG 2826
||| ||||| || |||| |||| ||| ||||| | || ||||| || ||
Sbjct 10013 GTCCCCGCC--GCTCTTGCTTTCCTTGAGGATCAGCTGCACCAACCGCGCTTCCAG 9960
Score = 116 bits (128), Expect = 7e-22
Identities = 202/294 (69%), Gaps = 0/294 (0%)
Strand=Plus/Minus
Query 4784 TATCAGGATGACCCGAAACTCGTTGCCATCGTTGGCCGTAAGCTGCTGGCCGACAAATAT 4843
|| ||||| ||||| | || || | ||| || || | |||||||||||||| |||
Sbjct 8099 TACCAGGAAGACCCTGATCTGGTGGTGATCTGCGGTCGCCAACTGCTGGCCGACAAGTAT 8040
Query 4844 TTCCCGCTGGTGAACAAGCCGCAGGAAAACAGCGAGGCGCTCGCGGCAGATATCATCATC 4903
|||||| | | ||||| | | | || ||| || || |||||| ||| |
Sbjct 8039 TTCCCGATCATCAACAAAGACAACGCGCCGACTGAAATGCTGGCCGCCGATATCGTCACC 7980
Query 4904 AGCCAGAAGCGAATCGGCAACCTGCCTGCTGTGCGTGTGCCGTACTTCCCGGCGAATGCC 4963
|| || ||||| | ||||| |||| || ||||| ||||| ||||||||| || |
Sbjct 7979 AGTCAAAAGCGCTTGGGCAATTTGCCAGCCGTGCGCGTGCCTTACTTCCCGCCGCGCGGG 7920
Query 4964 GTGTTAGTGACCACGCTGGAAAACCTCTCTATCTATTTCATGGATGAGAGCCACCGCCGC 5023
|| | || |||| |||||||||||| || ||||| | ||| | |||| |||||||
Sbjct 7919 TTGCTGGTCACCAAGCTGGAAAACCTGTCGATCTACTGGCAGGAAGGCAGCCGCCGCCGC 7860
Query 5024 AGCATTGATGAAAACCCGAAAAAAGACCGCGTGGAAAACTACGAGTCGATGAAT 5077
| | | | || || | || |||||| | ||||||||||||||| | |||
Sbjct 7859 ACCGTCGTCGACAATGCCAAGCGTGACCGCATCGAAAACTACGAGTCGGTCAAT 7806
Score = 87.8 bits (96), Expect = 3e-13
Identities = 168/248 (68%), Gaps = 0/248 (0%)
Strand=Plus/Minus
Query 474 ATGCCGTCCGGTTTTCCGCCGGGAGCGTAGAAAAACAGGTTTTTAAAGTTGCCGAGCCCT 533
|| |||||| || ||| ||| | || | ||||| ||| ||| ||||| ||||
Sbjct 12282 ATCCCGTCCTTCTTGCCGGTGGGCGAATACACAAACAAGTTGCGAAAATTGCCTGGCCCC 12223
Query 534 TTCGAGTTACGCATCGCCTCGCGCAGCGATTCGACGTCGGTCGCGCTCTGCGCCGGGTCA 593
|| |||| | |||| ||||| | |||| ||||| | |||| || | ||
Sbjct 12222 TTGGAGTCCTTGAGAGCCTTGCGCAAAGCGTCGATATCGGTTTCAGTCTGTGCGGCATCG 12163
Query 594 GTCACATACATGATGTAACCTGCGTGCGCGCCGTTCTGGTAATACTTGCGGCGGAACAGC 653
|||| || | ||| | || ||||| ||| |||| ||| |||||||||||||||| |
Sbjct 12162 GTCATGTAGAGAATGAAGCCGGCGTGACTGCCATTCTCGTAGTACTTGCGGCGGAACAAC 12103
Query 654 GTCGCGGATTCATTCAGCCATGCGGAATTAAGCGCGCTGAGATATTCAGGCAGGCCGTAA 713
|| || ||||| || ||| | || || | | || || | | || |||| ||| |||
Sbjct 12102 GTGGCCGATTCGTTGAGCAACGCCGACTGCAAGGCACTAATCCACTCCGGCAAGCCATAA 12043
Query 714 ATCTCCTG 721
||||||||
Sbjct 12042 ATCTCCTG 12035
>seq3088488
Length=17142
Score = 331 bits (366), Expect = 2e-86
Identities = 1141/1758 (65%), Gaps = 100/1758 (6%)
Strand=Plus/Minus
Query 13898 GATTTTCACCACGGCACGCAGGTCATCGAAATTAATGACGGTACGCGTGTTATTTCCACA 13957
|||| || ||||||| || |||||||||| | || ||||| || || ||| |||
Sbjct 16622 GATTATCTCCACGGCGTGCGGGTCATCGAACTCAACGACGGCACCCGCCCCATTCGCACT 16563
Query 13958 GTAGCGACTGCGGTCGTCGGCATGGTTTGTACAGCCAGCGATGCAGATGTCACGCTATTT 14017
| | || || ||| ||||||||||||| || || ||||| || ||| | |||
Sbjct 16562 ATTCCCACCGCAGTCATCGGCATGGTTTGCACCGCTGAAGATGCGGACC-CACTCGTTTT 16504
Query 14018 CCC-CTCAATGAACCGGTACTGATTACCAATGTGCAAAGTGCCATTGCGAAAGCCGGTAA 14076
||| || | || || || || ||||| ||||||| ||| | | || |||||
Sbjct 16503 CCCTCTGGACACTCCAGTCCTCATCACCAACGTGCAAACCGCCGTCGGCAAGGCCGGCGT 16444
Query 14077 AAAAGGCACGCTGGCTGCATCACTGCAGGCCATTGCAGACCAGTCAAAACCCGTCACTGT 14136
|| ||||| |||||||| ||||| | ||| || |||||| | || || | | |
Sbjct 16443 CAAGGGCACCCTGGCTGCCAGCCTGCAAGGCATCGCCGACCAGACCAAGCCTTACGTTAT 16384
Query 14137 TGTTGTACGTGTTGAGGATGGAACCGGCGATGACGAGGAAGCTGCGCTCGCACAGACTGT 14196
|| ||||| || | || || | | ||| | ||| || || || ||| | || ||
Sbjct 16383 CGTGGTACGGGTCAAAGAAGGCGCTGACGAAG-CGACGA--CTACGAGCGCCCTGATTG- 16328
Query 14197 TTCCAACATTATCGGAGGTACGGATGAGAACGGTAAATACACCGGAATCAAGGCTCTCCT 14256
| ||||| | |||| |||||||||| || || ||||| ||
Sbjct 16327 --------------GCGGTACAACACCAACCGGTCAATACACCGGCATGAAAGCTCTGCT 16282
Query 14257 GACCGC----TCAGGCCGTCACCGGCGTCAAGCCGCGTATTCTTGGGGTGCCGGGGCTGG 14312
| || ||| || || ||| | | |||||||| ||||| ||||| || || |
Sbjct 16281 CGCAGCCAAATCACGC-GTG---GGCATGACTCCGCGTATCCTTGGCGTGCCAGGCCTCG 16226
Query 14313 ATACTAAAGAGGTCGCGGTCGCGCTTG-CGTCGGCTGCCATTAAGTTACGTGCATTTGCT 14371
| | | || || ||| || | || | | |||| | | || || |||||
Sbjct 16225 ACAGTTTGCCAGTAGCCACCGCCCTCGGCGCCATC-GCCAAAGACCTGCGCGCCTTTGCA 16167
Query 14372 TACGTCAGCGCGTGGGGATGTAAGACTATTTCCGAAGCGATGGAATATCGTAAAAATTTC 14431
||||| ||||| ||| || || || | || | ||| || || | || |||
Sbjct 16166 TACGTAAGCGCCTGGAACTGCAAAACCAAGGAAGAGGTAGTGGCGTACCGCGAGAACTTC 16107
Query 14432 AGCCAGCGCGAGCTGATGGTTATCTGGCCTGATTTCCTCGCATGGGACACAGTGAAAAAT 14491
| ||||| ||||||| || ||||| || ||||| |||||||| || | ||
Sbjct 16106 GGTGCCCGCGAAATGATGGTGATTTGGCCGGACTTCCTGAACTGGGACACTGTCACCAAC 16047
Query 14492 ACCACCGCAACGGCTTACGCCACTGCGCGTGCACTCGGCCTGCGTGCTTACATCGACCAG 14551
| ||||| | |||| ||| || || || |||||||| || || | ||||||||
Sbjct 16046 AAGACCGCCAGCGCTTCGGCCGTGGCCCGCGCCCTCGGCCTTCGCGCCAAGATCGACCA- 15988
Query 14552 ACTGTCGGCT-GGCACAAAACCCTGTCTAACGTTGGTGTACAGGGAGTTACCGGCATCAG 14610
| | ||| | |||| ||||||||||| ||||| | || || || ||||| |||||
Sbjct 15987 AGAGACGGGTTGGCATAAAACCCTGTCCAACGTGGCCGTGAGTGGCGTGACCGGTATCAG 15928
Query 14611 CGCCTCAGTGTTCTGGGATTTGCAGGCATCCGGCACCGATGCTGACCTTCTCAACGAGGC 14670
|||| |||||||||||| |||| | | |||||| || || ||||||
Sbjct 15927 CGCCGACGTGTTCTGGGATCTGCAAAACCCAGCCACCGACGCCAACTACCTCAACAGCAA 15868
Query 14671 CGGGGTTACAACTCTGGT--ACGCAAGGACGGTTTCCGCTTCTGGGGTAACCGCACCTGC 14728
|| || || || ||| | |||| | ||||||| ||||||||||||| ||||||||||
Sbjct 15867 CGACGTCACCACCCTGATCAACGCCA--ACGGTTTTCGCTTCTGGGGTAGCCGCACCTGC 15810
Query 14729 TCAGATGACCCGCTTTTTCTGTTTGAGAACTACACCCGTACCGCGCAGGTACTGGCCGAC 14788
||||||||| | || || || ||||||||||| ||||||||| | || || |||
Sbjct 15809 AGTGATGACCCGTTGTTCGCCTTCGAAAACTACACCCGCACCGCGCAGATCCTCGCGGAC 15750
Query 14789 ACGATGGCTGAAGCGCACATGTGGGCGGTCGATAAGCCCATTACCGCCACGCTCATTCGT 14848
|| |||| ||||||||||||||||| || || || || |||| | || | ||
Sbjct 15749 ACCATGGGCGAAGCGCACATGTGGGCAGTTGACCGCCCTATGCACGCCTCCCTGGTACGC 15690
Query 14849 GACATTGTTGACGGCATCAATGCCAAATTCCGCGAGCTGAAAACAAACGGCTACATCGTG 14908
||| | || || ||| | | ||||| | |||||| ||||| | | |||||| | |
Sbjct 15689 GACCTGGTCGAAGGCGTAAGCGCCAAGATGCGCGAGTTGAAATCCCAGGGCTACCTGATC 15630
Query 14909 GACGGTGAATGCTGGTTCGACGAGGA-ATCGAACGACAAGGAGACCCTGAAAGCCGGGAA 14967
| ||| |||||| | || || ||| ||| ||| || ||||| || ||||| ||
Sbjct 15629 GGCGGCAGTTGCTGGAACCCGGACGACATC-AACACCAAAGACACCCTCAAGGCCGGCAA 15571
Query 14968 ACTGTATATCGACTACGACTATACGCCGGTTCCGCCACTGGAGAGCATGACCATGCGCCA 15027
|| | | || |||||||| || || || |||||||| || | | ||| | |||||
Sbjct 15570 GCTCTGGCTTGATTACGACTACACCCCCGTGCCGCCACTTGAAGACCTCACCTTCCGCCA 15511
Query 15028 GCGTATCACCGATAAATATCTGGTGAATCTGGCCGAATCGGTCAACAGCTAA-------- 15079
||| |||||||| || ||| | | | ||| | ||| |||||||
Sbjct 15510 GCGAATCACCGACCGTTACCTGATCGACTTCGCCAAGGGCATCAGCAGCTAAACCGGGTC 15451
Query 15080 -----------GGAG-----CCTGA---------------AACA---ACATGGCACTACC 15105
|||| ||||| |||| ||||||| | ||
Sbjct 15450 TCCCCGCGAGGGGAGTTCACCCTGAACACGTATCCCGGAGAACACCGCCATGGCAATGCC 15391
Query 15106 CCGTAAACTCAAATACCTGAATATGTTCAACGATGGCCTCAGCTACATGGGTGTTGTTGA 15165
|| || |||||| |||| || ||||||| || ||| |||||| | || ||| |||
Sbjct 15390 TCGCAAGCTCAAAAACCTCAACCTGTTCAATGACGGCAACAGCTATCTCGG-CTTGGTGA 15332
Query 15166 A-TCCGTAACGTTGCCGAAGCTGACCCGCAAGCTCGAAAACTATCGCGGCGGCGGTATGA 15224
| ||| | || |||| || ||||||| | ||| |||||||||||||| ||||
Sbjct 15331 AGTCCCTCACCCTGCCCTCCCTCGGCCGCAAGATGGAAGCGTATCGCGGCGGCGGCATGA 15272
Query 15225 ATGGCGCGG-CAGCGATTGACCTCGGCCT---CGACGACGATGCATTAACCGTCGAATGG 15280
||||| ||| || | |||||| ||| | |||||||| |||| | ||||||||
Sbjct 15271 ATGGCCCGGTCAAAG-CTGACCTGGGCATGTCCGACGACG--GCATCCA-GTTCGAATGG 15216
Query 15281 TCTGTCGGCGGCCTGCCTGATGTG-GCTCTGTGGGCGCAGTACGCCGCCCCGGGCGCTGA 15339
||| ||||| ||| || |||| || | |||| || ||| |||
Sbjct 15215 AAGACCGGTGGCCT---CGATCTGATCTCTCTGCG-TCAGTTCGGCGCGGTCAACGCCTC 15160
Query 15340 TGCTGTGCCGCTGCGTTTTGCTGGTTCTTACCAGCGCGACGACACCGGCGAAATC-GTGG 15398
|||| | ||||| || |||| ||||||||| |||||||| |||||| || |
Sbjct 15159 CAGTGTGGCCCTGCGATTCTCTGGCCCTTACCAGCAAGACGACACAGGCGAAGTCAGCAA 15100
Query 15399 CGTCGAGGTGGTCATGCGTGGCCGTCATAAAGAAATCGACGGCGGCGAGAATAAGCAGGG 15458
|| || ||||| ||||||||||||| || ||||| ||||| ||| ||
Sbjct 15099 TGTGGAAGTGGTTGTGCGTGGCCGTCACGAAACCATCGAGATGGGCGATGCCCAGCCCGG 15040
Query 15459 TGAAAACACCTCGACCAAAC--TGTCGACTGTCTGCACCTACTACCGCCTCACGATTGAT 15516
|| |||| || || | || | || ||||| ||||||| || || | |||
Sbjct 15039 CGAGGACAC--TGAACACTCCATGACCACCACCTGCAGCTACTACAAGCTGACCGTAGAT 14982
Query 15517 GGCAGCGACGTCATCGAAATCGACACCGTCAACATGGTCGAGAAGGTGAACGGCGTCGAC 15576
||| || ||||||| ||||| ||||| | ||||||||||| ||||| || |||
Sbjct 14981 GGCGAAGAAATCATCGAGATCGATCTGCTCAACTTTGTCGAGAAGGTCAACGGTGTGGAC 14922
Query 15577 CGTCTGGAGCAGCACCGC 15594
|||||| ||||||||
Sbjct 14921 ATGCTGGAGAAGCACCGC 14904
>seq3063309
Length=1409
Score = 163 bits (180), Expect = 5e-36
Identities = 813/1268 (64%), Gaps = 69/1268 (5%)
Strand=Plus/Minus
Query 1292 AGCGGTTCGTTTAACAGGGCGTGCATGGTGGCCCATGCGATATCAGCGTGGCTGGCTTCC 1351
|| ||||| || ||||||||||||||| | | ||| ||||| || ||||||| || |
Sbjct 1231 AGGGGTTCATTGAACAGGGCGTGCATGATCGACCAGGCGATGTCGGCGTGGCCGGTGGCG 1172
Query 1352 TCGGTGCGACTGGCCTCATAGGTGGCGCTGCGCCCGCTGCTGGTCATGGTTTTGCG---G 1408
|| ||||| || |||||| | ||| |||||| |||| ||| ||| |
Sbjct 1171 TCAGTGCGCGAAGCGCTGTAGGTGAC-CTGG--CCGCTGGTGGT---GGTGCCGCGCTTG 1118
Query 1409 ATGGACATAAACGACTGTGTGACATCAGTTGCTCCGGCGTCGTACTCCAGACAGCCACGG 1468
|||| || |||| ||||| || || || |||||||| | || | | || |
Sbjct 1117 ATGGTCAGGAACGCCTGTGCGATGTCGGTCCAACCGGCGTCCCATTCGATGCGGCTCCCC 1058
Query 1469 CGAATCGTGTCTTTCGCCTTGAGCACCATTGCGGTTTTCATTTCTGGCGTGTAACGGATA 1528
| |||||||| | || ||||| |||| || | |||| | || | ||||| ||||
Sbjct 1057 TGGATCGTGTCCTGGGCTTTGAGTACCAGTGTGTTTTTGGTCTCGAGGCTGTAATGGAT- 999
Query 1529 CCGCGTGCCGC---CGGGTAGAATGAGCGCACCAACTGGAATACACCGAGACCGAGGCCT 1585
||| || ||| ||||||||| |||||||| | || |||||| |||| ||
Sbjct 998 -CGC-TGTCGCACGCGGGTAGAAGTCGCGCACCAGGTCAAACACACCGTAGCCGATACCG 941
Query 1586 GTTGCGTCAATGCCGATGTATTCGACGTTGTATTTCTCAGTGAGCCTGCGGA--TGGCTT 1643
|||| || |||||||||| | |||||| | ||| || || | || ||| |
Sbjct 940 GTTGTATCGATGCCGATGTGCTGCACGTTGAAACGCTCGGTAAGTTTCTTGACCTGG--T 883
Query 1644 CTGCCTGCG-CGGCAAAGTCCATGCCTTT-CCACTGGTGACGCTCCAGCATGCGAAACTT 1701
| ||||| | || | | |||| ||| ||| ||||| ||||| || ||
Sbjct 882 CGGCCTGGTACTTGAACGAC--TGCCCACGCCAACTGTGTTTTTCCAGGATGCGGAATTT 825
Query 1702 GCCACCCGAAACCACCGGCGGCGCGAGTACGACACATCCGGCACTGTCGCCGGTGTGGGA 1761
| || | ||| ||||| |||| || || || ||| ||||| |||| ||
Sbjct 824 CGCTCCGGGTTCCAGTGGCGGAGCGACCACCACGCACGTGGCGTCGTCGCGGGTGCGGCT 765
Query 1762 CGGGTCGTAGCCAATCCAGACCGGGCGCGAGCCGAATGGATGGTCGGCGAACGGGGCGAA 1821
||| |||||||||| ||| ||||||| |||||| || | || ||| | |
Sbjct 764 CGGATCGTAGCCAAGCCACACCGGGCTGTTGCCGAAAGGTCGATCCAGTTCAGGGTTGTA 705
Query 1822 GTCCTCCCATGTTTCCATCACGTCGACCATGCAGCGCTGCAGCTCCTCGAACGGGAATAC 1881
||||||||| | || |||| || |||| ||| || | || ||| |
Sbjct 704 GTCCTCCCACAA---CGACAGGTCGGAGTAACACCGCTCCAGGTCTTTGAGGCCGAAGGC 648
Query 1882 -CGATGCCTTATCGTCGACAAACTCGCACATAAACAGGTTCTTAAAGTCCTCATCACTGT 1940
| || || | ||||| |||| ||| ||||| | || || | || || ||
Sbjct 647 GCTCTGGCTGCT-GTCGATGAACTTGCAGTAGAACAGCTGCTGGAATTTGTCTTCGTCGT 589
Query 1941 TTTCGCGTCTG-AGCTGGTCGAGGTCGAACAGGGTGCAGCCACCGGCAAGGGCGTCCTCA 1999
|| | ||| || || |||||||||||||| |||||| ||||| | |||||| ||
Sbjct 588 ACTCCAG-CTGCAGTTGCTCGAGGTCGAACAGATCGCAGCCGCCGGCTATGGCGTCGTCC 530
Query 2000 ATAGTGACAATCTGCCGCCACTGTCCGTCAGCGCAAAGAAGCCCACCGGCGAGCGCGCTG 2059
| |||| | | ||||| || ||||| | ||| | | || | | || |
Sbjct 529 AGGGTGATGGTTTTGCGCCATTGGCCGTCGGGGCACA-ATGCGCCCTGG----------G 481
Query 2060 TGACTGATGTCGATTTCGATGCGGTCAG-------CGGCACT---GGCGCGCCCCTTGTT 2109
|| ||| | | ||| || || ||| |||| | | ||||| ||||
Sbjct 480 TGTATGACGCC----TCGGTG-GGCCAGGTGCCGCCGGCCTTCTTGCCGCGCTTGCTGTT 426
Query 2110 G---AACAGCTCGCCAGACCAGAAGGGGTAAGCGCCGTGCGCCAGCGTGGAAGGTGTCGA 2166
| || |||||| |||||||| ||||| || ||||| | | | || |||||
Sbjct 425 GCGGAATTCCTCGCCCGACCAGAACGGGTACGCTTGGTGCGAGACTGCGCTGGGCGTCGA 366
Query 2167 AAAGTAAGTTGAGCGCAGATGCTTTTGCGAGGCCATGCCCGATGCGACTTTGCGCAGCTT 2226
|||||| ||| |||| | ||| || | | ||||| | || || ||| || ||
Sbjct 365 AAAGTAGGTTTTGCGCCACTTCTTGTGGGTGCCCATGGCACTGGCCACGGTGCTGAGTTT 306
Query 2227 CTGAAAATTCGGGATCCAGAATATTTCATCGACATACAGGTCGCCGTTATGGCTCTGTGC 2286
| || | | ||||| || |||||||| || | || ||| | | || ||| ||
Sbjct 305 GTCGAAGTCACGTATCCAAAAATACTCATCGACGTAGACGTGGCCATGGTAGCCCTGGGC 246
Query 2287 GGTGTTGGAATTGGT-GCCGAGAAAAATCAGCTTTGCGCCGTTGTTGCCGATGACAATCG 2345
|||| || |||||| | | ||||| ||||| ||||||||| || ||| |||
Sbjct 245 GGTGCTGCTATTGGTCGACAAGAAACG-CAGCTCGGCGCCGTTGCTGAGCGTGA---TCG 190
Query 2346 GGTCGCCGGTCAGGTCGACGTC-AACCAGTCGC---GCAAACTGGATGATGTATTCCCGG 2401
||| ||||||||| |||| ||| ||||| | || ||||||||||||||||| |||
Sbjct 189 GGTTGCCGGTCAGCTCGATGTCGAACCACT-GCTTTGCAAACTGGATGATGTAACTGCGG 131
Query 2402 AACACGTAAGCCTGCGTTTTACTGGCCGACAGAAAAATCTGGTTATGGCCGGTCTTGAGC 2461
|| | | | ||||| ||||||||||| || | |||||| | ||||||| |
Sbjct 130 AAAATTTCCGACTGCGAGCGGCTGGCCGACAGGAACACCTGGTTGTCGCCGGTCAGCACG 71
Query 2462 GCGCGCAGCAGTGCCTCGCGGGAAAAGTAGAACGTCGCGCCAATCTGGCGGGATTTGAGA 2521
||| || | || |||| || |||||| ||||| ||| | ||||||| ||| ||
Sbjct 70 GCGTCCATGAACGCTTCGCCGGCGAAGTAGTACGTCAGGCCCACCTGGCGGCTTTTCAGG 11
Query 2522 ATATCGCG 2529
|| | |||
Sbjct 10 ATGTTGCG 3
>seq2959876
Length=477
Score = 113 bits (124), Expect = 8e-21
Identities = 225/332 (68%), Gaps = 10/332 (3%)
Strand=Plus/Minus
Query 11013 AACCCTGACACCTGTCCGGAAAATTTGCTGCCGTGGCTGGCGTGGGCGTTTTCTGTCGAC 11072
||| |||| ||||| |||| | ||||||||||| ||||| ||||| | || || ||
Sbjct 330 AACGCTGATACCTGCCCGGTACATTTGCTGCCGCATCTGGCATGGGCATGGTCGGTGGAT 271
Query 11073 CGGTGGGATGAGAACTGGCCGGAGGGAACAAAACGTGCCGTTATCCGTGATGCATATTTC 11132
|| |||||| | ||| | |||| || ||||| |||| ||| | | |||| |
Sbjct 270 CGCTGGGATTACCGATGGACCGAGGCGACCAAACGCGCCGCCATCAAGGCCTCTTATTAC 211
Query 11133 ATTCACTGCCACAAGGGGACTATCGGCGCAATCCGTCGGGTAGTGGAGCCACTCGGCTAT 11192
|| || ||||||||| || |||||||| | || || || || ||||| || |||||
Sbjct 210 ATACATGCCCACAAGGGCACCATCGGCGCGTTACGCCGTGTGGTAGAGCCTCTGGGCTAC 151
Query 11193 GTCATCAATGTAACGGAATGGTGGGA-AAGCGGC-------GACCCGCCAGGCACATTCC 11244
| ||| | | | || |||| | | | ||| |||| |||||||| ||
Sbjct 150 CTGATCGAGATTATCGAGTGGTTCAACATGAGGCCCGAAGGGACC--CCAGGCACCTTTG 93
Query 11245 GGCTTGATATCGGGGTGCTTGAAAGTGGCATTACCGAGGAAATGTATTTCGAAATGGAGC 11304
| | | |||||||| | || | || || || |||||||||||| || ||||||
Sbjct 92 CGTTAAAGGTCGGGGTGTTGGACACCGGTATCACTGAGGAAATGTATCAGGAGCTGGAGC 33
Query 11305 GACTGATTGCGGATGCAAAGCCAGCCAGTCGT 11336
| ||||||| || || ||||| | ||| |||
Sbjct 32 GGCTGATTGATGACGCCAAGCCCGTCAGCCGT 1
>seq3084702
Length=3045
Score = 93.3 bits (102), Expect = 8e-15
Identities = 128/179 (72%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 11013 AACCCTGACACCTGTCCGGAAAATTTGCTGCCGTGGCTGGCGTGGGCGTTTTCTGTCGAC 11072
||| |||| ||||| |||| ||||||||||| ||||| ||||| | || || ||
Sbjct 2898 AACGCTGATACCTGCCCGGTGCATTTGCTGCCGCATCTGGCCTGGGCTTGGTCGGTGGAT 2839
Query 11073 CGGTGGGATGAGAACTGGCCGGAGGGAACAAAACGTGCCGTTATCCGTGATGCATATTTC 11132
|| |||||| | ||| | |||| || || ||||||| ||| | | |||| |
Sbjct 2838 CGCTGGGATTACCGATGGACAGAGGCGACCAAGCGTGCCGCCATCAAGGCCTCTTATTAC 2779
Query 11133 ATTCACTGCCACAAGGGGACTATCGGCGCAATCCGTCGGGTAGTGGAGCCACTCGGCTA 11191
|| || ||||||||| ||||||||||| | ||||| || || ||||| || |||||
Sbjct 2778 ATCCATGCCCACAAGGGAACTATCGGCGCCTTGCGTCGTGTGGTTGAGCCTCTGGGCTA 2720
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 91538893302490
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |