Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09]
3,088,511 sequences; 2,785,377,831 total letters
Query= NC_029015.2
Length=33509
Score E
Sequences producing significant alignments: (Bits) Value
seq3088503 82.4 2e-11
>seq3088503
Length=21467
Score = 82.4 bits (90), Expect = 2e-11
Identities = 146/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 12161 GGCGGGTGGTGGATTCGTGAAATTGGTCTGTTTGATAAAGACGGCGATATGATTGCCGTC 12220
|| || ||||||||||| ||||| || ||| ||| |||||||| || | |||||
Sbjct 240 GGTGGATGGTGGATTCGAGAAATAGGCTTGTATGACTCAGACGGCGCCCTGGTAGCCGTA 181
Query 12221 GCCAACTGTGCGGAAACCTATAAGCCGCAGTTACAGGAGGGAAGCGGGCGCGTGCAGGTG 12280
|| || || || || ||||||||||| | | | || || ||| ||| ||
Sbjct 180 GCGAATTGCGCACCAAGCTATAAGCCGCTGATGTCCCAAGGCTCAGGCCGCACGCAAGTC 121
Query 12281 GTGCGCATGATTCTGATTGTCAGCAGTACTGCCGCCGTGACGCTGAAAATTGACCCTTCG 12340
|| ||||||| | | |||||| ||| | ||| |||| |||||| || |||||
Sbjct 120 GTTCGCATGAATTTCATTGTCTCCAGCGCAGCCAACGTGGTGCTGAAGATCGACCCCGAC 61
Query 12341 GTAGTGCTGGCAACCCGTCAGTACGTTGATAAT 12373
|| || ||||| || || ||||| || ||| ||
Sbjct 60 GTCGTTCTGGCTACACGCCAGTATGTCGATGAT 28
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 103178929036122
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |