Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09] 3,088,511 sequences; 2,785,377,831 total letters Query= NC_030696.1 Length=93139 Score E Sequences producing significant alignments: (Bits) Value seq2955700 93.3 2e-14 >seq2955700 Length=463 Score = 93.3 bits (102), Expect = 2e-14 Identities = 92/119 (77%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 47492 CACGTCGCCCTGATGCCGGATGCACACGGCGGCAAAGGATCTGCCGTTGGCACGGTGATT 47551 ||| |||| |||||||||||| ||| ||||| || || || | |||| || || Sbjct 413 CACCTCGCGGTGATGCCGGATGTGCACCTGGGCAAGGGTTCGACCATCGGCAGCGTAATC 354 Query 47552 CCCACCGTGGATGCCGTGATCCCGGCCGCGGTCGGCGTGGACATCGGCTGCGGCATGAT 47610 ||||| |||| || | |||||||| ||||| |||||||||||||||||||| ||||| Sbjct 353 CCCACGGTGGGCGCGATTATCCCGGCGGCGGTGGGCGTGGACATCGGCTGCGGGATGAT 295 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 286705925410100