Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09] 3,088,511 sequences; 2,785,377,831 total letters Query= NC_030901.1 Length=92618 Score E Sequences producing significant alignments: (Bits) Value seq2955700 102 5e-17 >seq2955700 Length=463 Score = 102 bits (112), Expect = 5e-17 Identities = 104/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 46806 TGCCGTTCATCCACCCTCACGTCGCTCTGATGCCGGATGCACACGGCGGCAAAGGATCTG 46865 ||||||| ||| | ||| |||| |||||||||||| ||| ||||| || || Sbjct 430 TGCCGTTTATCTTCAAGCACCTCGCGGTGATGCCGGATGTGCACCTGGGCAAGGGTTCGA 371 Query 46866 CCGTTGGCACGGTGATACCCACGGTGGACGCCGTGATCCCGGCCGCGGTCGGCGTGGACA 46925 || | |||| || || |||||||||| ||| | |||||||| ||||| |||||||||| Sbjct 370 CCATCGGCAGCGTAATCCCCACGGTGGGCGCGATTATCCCGGCGGCGGTGGGCGTGGACA 311 Query 46926 TCGGGTGCGGCATGAT 46941 |||| ||||| ||||| Sbjct 310 TCGGCTGCGGGATGAT 295 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 285101480865109