Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09] 3,088,511 sequences; 2,785,377,831 total letters Query= NC_030917.1 Length=93577 Score E Sequences producing significant alignments: (Bits) Value seq2955700 98.7 6e-16 >seq2955700 Length=463 Score = 98.7 bits (108), Expect = 6e-16 Identities = 108/144 (75%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 45295 TGCCGTTCATCCATCCGCACGTGGCGCTGATGCCGGATGCTCACAGCGGCAAGGGGTCCG 45354 ||||||| ||| |||| | ||| |||||||||||| ||| |||||||| || Sbjct 430 TGCCGTTTATCTTCAAGCACCTCGCGGTGATGCCGGATGTGCACCTGGGCAAGGGTTCGA 371 Query 45355 CGGTCGGCACTGTGATCCCGACCGTCGATGCGGTGATCCCCGCGGCGGTCGGCGTCGACA 45414 | |||||| || ||||| || || | ||| | ||||| |||||||| ||||| |||| Sbjct 370 CCATCGGCAGCGTAATCCCCACGGTGGGCGCGATTATCCCGGCGGCGGTGGGCGTGGACA 311 Query 45415 TCGGCTGCGGCATGATCGGCGTGC 45438 |||||||||| ||||| | || || Sbjct 310 TCGGCTGCGGGATGATTGCCGCGC 287 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 288054767465198