Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09] 3,088,511 sequences; 2,785,377,831 total letters Query= NC_031010.1 Length=246390 Score E Sequences producing significant alignments: (Bits) Value seq3079416 89.7 8e-13 >seq3079416 Length=2120 Score = 89.7 bits (98), Expect = 8e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 202549 GACCGTACCGGCACCGGCACGCGCTCCTTGTTCGGGGCCCAGATGCGGTTTGACCTGACC 202608 || ||||||||||||||||| || || |||||| |||| ||| ||||| || Sbjct 1390 GATCGTACCGGCACCGGCACCCGGGCCGTGTTCGCCCGCCAGTATCGGCACAACCTGGCC 1331 Query 202609 GAAGGCTTCCCACTGGTGACCACGAAAAAGGTTCACCTCCGTTCTATCATTCACGAGCTG 202668 || |||||||| ||| ||||||| || || | ||| || ||| |||||||| Sbjct 1330 GACGGCTTCCCGCTGCTGACCACCAAGAAACTGCACTTCAAAAGCATCGCCAACGAGCTG 1271 Query 202669 CTGTGGTTCCTGAAAGGGGACACCAACATCAGTTACCTGAACGATAACGGGGTCACTATC 202728 | ||| | ||| || ||||||| |||| | || ||||| ||||| || ||| Sbjct 1270 ATCTGGATGTTGAGCGGCAACACCAATATCAAGTGGCTTAACGAAAACGGCGTGCGCATC 1211 Query 202729 TGGGACGAATGGGC 202742 ||||| |||||||| Sbjct 1210 TGGGATGAATGGGC 1197 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 757885812606000