Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09] 3,088,511 sequences; 2,785,377,831 total letters Query= NC_031029.1 Length=93686 Score E Sequences producing significant alignments: (Bits) Value seq2955700 102 5e-17 >seq2955700 Length=463 Score = 102 bits (112), Expect = 5e-17 Identities = 94/119 (79%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 48188 CACGTCGCCCTCATGCCGGATGCACACGGCGGCAAAGGATCTGCCGTCGGCACGGTGATT 48247 ||| |||| | |||||||||| ||| ||||| || || || |||||| || || Sbjct 413 CACCTCGCGGTGATGCCGGATGTGCACCTGGGCAAGGGTTCGACCATCGGCAGCGTAATC 354 Query 48248 CCCACGGTGGACGCCGTGATCCCGGCCGCGGTCGGCGTGGACATCGGCTGCGGCATGAT 48306 |||||||||| ||| | |||||||| ||||| |||||||||||||||||||| ||||| Sbjct 353 CCCACGGTGGGCGCGATTATCCCGGCGGCGGTGGGCGTGGACATCGGCTGCGGGATGAT 295 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 288390438204937