Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09] 3,088,511 sequences; 2,785,377,831 total letters Query= NC_031040.1 Length=31987 Score E Sequences producing significant alignments: (Bits) Value seq327277 86.0 1e-12 >seq327277 Length=624 Score = 86.0 bits (94), Expect = 1e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 3586 GACATGGCAAAAGAAATTTCCATGATTCAGCGTAACGAAAAAGGGAAACAAGCCCGTCAA 3645 ||||||||||||||| || | |||||| |||| || ||||| || || ||||| |||||| Sbjct 75 GACATGGCAAAAGAACTTGCTATGATTGAGCGCAATGAAAAGGGAAAGCAAGCACGTCAA 16 Query 3646 TATTTCATTGAA 3657 |||||||||||| Sbjct 15 TATTTCATTGAA 4 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 98487156158318