Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09] 3,088,511 sequences; 2,785,377,831 total letters Query= NC_031091.1 Length=43277 Score E Sequences producing significant alignments: (Bits) Value seq3088233 571 2e-158 seq2955279 536 3e-148 seq2942857 513 4e-141 seq2943337 488 1e-133 seq3088363 251 2e-62 seq2125050 179 1e-40 seq1778666 179 1e-40 seq1451710 178 3e-40 seq1901267 168 2e-37 seq2056270 165 2e-36 seq1153466 159 9e-35 seq2881747 120 8e-23 seq2723185 109 1e-19 seq3088504 98.7 3e-16 seq3087573 98.7 3e-16 seq2950908 98.7 3e-16 seq277625 96.9 9e-16 seq3088319 95.1 3e-15 seq3087763 95.1 3e-15 seq3088492 93.3 1e-14 >seq3088233 Length=8288 Score = 571 bits (632), Expect = 2e-158 Identities = 394/446 (88%), Gaps = 0/446 (0%) Strand=Plus/Plus Query 9183 GAACGAGCCCCCTGAAAGACAGGACACCGTTTCCCCCTTACGATAAGGGATAGGCAAACG 9242 ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 6588 GAACGAGCCCCATGAAAGACAGGACACCGTTTCCCTCTTACGATAAGGGATAGGCAAACG 6647 Query 9243 GTTATGTTTATGACTAACAGCAACGACAAGAGCGGTGAGCTATTGGGTCAGGAGCGGCGG 9302 |||||||||||||||||||| ||||| ||||| || ||||| ||||| |||||||||||| Sbjct 6648 GTTATGTTTATGACTAACAGTAACGATAAGAGTGGGGAGCTTTTGGGCCAGGAGCGGCGG 6707 Query 9303 CGCCGCTGGAGCCCAGAGCAAAAGCTGGCGATGGTTCGCGAGAGCCTTGAGCCAGGACAC 9362 ||||| ||||||||||||||||| ||| | |||||||||||||| |||||||| || | Sbjct 6708 CGCCGTTGGAGCCCAGAGCAAAAACTGACCATGGTTCGCGAGAGTCTTGAGCCGGGGAAA 6767 Query 9363 AGCGTTTCGGTGGTGGCCCGGCGCAACGGCGTCAATGCCAATCAACTATTTCACTGGCGC 9422 |||||||| |||||||| |||||||| ||| |||||||||| || || || | |||||| Sbjct 6768 AGCGTTTCAGTGGTGGCTCGGCGCAATGGCATCAATGCCAACCAGCTGTTCCTGTGGCGC 6827 Query 9423 AAGCTTTACCAGGACGGAAGTTTGTCGGCGGTCAGCGCCGGTGAAGCCGTGGTGCCTGCG 9482 ||| | || |||||||| || |||||||||||||| || || ||||| ||||||||||| Sbjct 6828 AAGTTGTATCAGGACGGCAGCTTGTCGGCGGTCAGTGCTGGCGAAGCTGTGGTGCCTGCC 6887 Query 9483 TCCGAGTTGAGCGATGCGCTCAGGCAGATTCGTGAGCTACAACGGATGCTGGGCAAGAAG 9542 |||||||| |||||| |||||| |||||| | ||| || |||||||||||||||||||| Sbjct 6888 TCCGAGTTTAGCGATTCGCTCAAGCAGATCCTTGAACTGCAACGGATGCTGGGCAAGAAA 6947 Query 9543 ACGATGGAAGCCGAAGTCCTCAAAGAGGCCGTGGAGATAGCCCGCTCGCGAAAATGGATT 9602 ||||||||||| ||| |||||||||||||||||||||| |||| ||||||||||||||| Sbjct 6948 ACGATGGAAGCAGAAATCCTCAAAGAGGCCGTGGAGATCGCCCAGTCGCGAAAATGGATT 7007 Query 9603 GCGCACTCACCCTTGTTGCCGGGGGA 9628 ||||||||||||||||||| | |||| Sbjct 7008 GCGCACTCACCCTTGTTGCTGAGGGA 7033 Score = 95.1 bits (104), Expect = 3e-15 Identities = 68/77 (88%), Gaps = 1/77 (1%) Strand=Plus/Plus Query 10432 GCCGAGGGAATTCAGGCGCTTGGCAGCAGCATCAATTTAACGGGGAGTTGGTGTCCGGTT 10491 || |||||| |||||||||| || |||||||||||||| |||||| ||||||||||||| Sbjct 7025 GCTGAGGGAGTTCAGGCGCTCCGCGGCAGCATCAATTTA-CGGGGAATTGGTGTCCGGTT 7083 Query 10492 TGGTAGGGGCAAGTCCA 10508 ||| || |||||||||| Sbjct 7084 TGGCAGCGGCAAGTCCA 7100 >seq2955279 Length=462 Score = 536 bits (594), Expect = 3e-148 Identities = 396/462 (86%), Gaps = 0/462 (0%) Strand=Plus/Minus Query 9612 CCCTTGTTGCCGGGGGACGGTCAGTGAAACTGGTCAGTGAATGTCTCGGTGTGGCGCGCT 9671 ||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||| Sbjct 462 CCCTTGTTGCCGGGGGACGACCAGTGAAGCTGGTCAGCAAATGTCTCGGTGTGGCGCGCT 403 Query 9672 CGCAATTAACGGTTCGACTCAAACAATCGGTATCGCCCAAAATACGGCGGCGCAGGCCGA 9731 |||||||||||||||| |||| |||||| ||||||||| | ||||||| ||||||| Sbjct 402 CGCAATTAACGGTTCGGATCAAGCAATCGCTATCGCCCAGAGTACGGCGAAGCAGGCCTG 343 Query 9732 TGAACGATACGGAGCTCGTCGCTGAAATCCAGCAACAAGTCAGCGAACTGCCCAGCTACG 9791 |||| || | ||| | || | ||||| |||||||| |||||||| ||||||||||| | Sbjct 342 TGAATGACGCTGAGTTGGTAGTCGAAATTCAGCAACAGGTCAGCGAGCTGCCCAGCTATG 283 Query 9792 GTTACCGCCGTGTTTGGGGATTGCTGCGCCGCGCGCGCGAAAAGCAGTCGCTGCCCGCGA 9851 | ||||| || || |||||||| |||||||| || || |||||||| || || |||| Sbjct 282 GCTACCGTCGCGTCTGGGGATTACTGCGCCGTGCACGAGAAAAGCAACGACTCCCTGCGA 223 Query 9852 TCAACGTAAAACGGGTTTACCGAGTCATGCGTGATCACAACCTGCTGCTTGAGCGGCGCA 9911 |||| ||||| ||||||||||| |||||||||||||||||||||||||||||||| || | Sbjct 222 TCAATGTAAAGCGGGTTTACCGGGTCATGCGTGATCACAACCTGCTGCTTGAGCGCCGGA 163 Query 9912 TCAAGCAGCCCGGCGTACCGCGCCGGCATGAAGGCCGTATCGCCGTTAACACCAGCGACA 9971 |||| ||||||||||| ||||| ||||| ||||||||||||||||| || |||||||| | Sbjct 162 TCAAACAGCCCGGCGTGCCGCGTCGGCACGAAGGCCGTATCGCCGTGAAAACCAGCGATA 103 Query 9972 CGCGCTGGTGCTCGGATGGCTTCGAATTCCGCTGCGACGACGGTGCGAAACTGAGCGTGA 10031 |||| ||||||||||| ||||| || ||||||||||| ||||| || ||||||||||| | Sbjct 102 CGCGTTGGTGCTCGGACGGCTTTGAGTTCCGCTGCGAGGACGGCGCCAAACTGAGCGTAA 43 Query 10032 CCTTTGCCCTGGACTGCTGTGATCGCGAAGCCATCGGCTGGG 10073 |||| |||||||| |||||||| || |||||||||||||||| Sbjct 42 CCTTCGCCCTGGATTGCTGTGACCGTGAAGCCATCGGCTGGG 1 >seq2942857 Length=424 Score = 513 bits (568), Expect = 4e-141 Identities = 368/424 (87%), Gaps = 0/424 (0%) Strand=Plus/Plus Query 10085 ACCGGCTACAGCGGCGATGACATACGCGACTTGATGCTGGAAAGCGTGGAGAAGCGTTTT 10144 ||||| |||||||||||||| || ||||| |||||||||||||||||||||| ||||||| Sbjct 1 ACCGGATACAGCGGCGATGATATCCGCGATTTGATGCTGGAAAGCGTGGAGAGGCGTTTT 60 Query 10145 GGCGACCTACTGCCGACCACACCGGTGCAATGGCTAAGCGATAACGGTTCGGCCTACATC 10204 || || | |||||| ||||| || || |||||||||||||| || |||||||| |||| | Sbjct 61 GGTGATCAACTGCCCACCACGCCAGTTCAATGGCTAAGCGACAATGGTTCGGCGTACACC 120 Query 10205 GCTGAACAGACGCGCCTGTTTGCTCGACAGATTGGCCTACAGCCAGTGACCACGCCGGTA 10264 ||||||||||||||| ||||| || ||||| || | | || ||||| || ||||| Sbjct 121 GCTGAACAGACGCGCGCATTTGCCCGGCAGATCGGTTTGGAACCGGTGACAACACCGGTG 180 Query 10265 CGCAGCCCGCAGAGCAACGGCATGGCAGAGAGCTTCGTTAAGACAATCAAGCGCGACTAC 10324 || |||||||| |||||||||||||| ||||||||||| ||||| ||||||| |||||| Sbjct 181 CGTAGCCCGCAAAGCAACGGCATGGCCGAGAGCTTCGTAAAGACCCTCAAGCGTGACTAC 240 Query 10325 GTGGCGCACATGCCCAAGCCGGATCGAGAGACAGCCTTGCGCAACCTGACGATTGCCTTC 10384 |||||||| |||||||| || |||||||| || || |||| |||||| | ||||||||| Sbjct 241 GTGGCGCATATGCCCAAACCAGATCGAGAAACGGCGCTGCGTAACCTGGCAATTGCCTTC 300 Query 10385 GAGCATTACAACGAGCAGCATCCGCACAGCGCCTTGAAATACCGCTCGCCGAGGGAATTC 10444 ||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||| ||| Sbjct 301 GAGCATTACAACGAGCAGCATCCACACAGCGCCTTGAAATATCGCTCACCGAGGGAGTTC 360 Query 10445 AGGCGCTTGGCAGCAGCATCAATTTAACGGGGAGTTGGTGTCCGGTTTGGTAGGGGCAAG 10504 ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| | Sbjct 361 AGGCGCTTGGCGGCAGCATCAATTTAACGGGGAGTTGGTGTCCGGTTTTGTAGGGGCTAA 420 Query 10505 TCCA 10508 |||| Sbjct 421 TCCA 424 >seq2943337 Length=425 Score = 488 bits (540), Expect = 1e-133 Identities = 363/425 (85%), Gaps = 0/425 (0%) Strand=Plus/Plus Query 9182 TGAACGAGCCCCCTGAAAGACAGGACACCGTTTCCCCCTTACGATAAGGGATAGGCAAAC 9241 |||||||||||| ||||||||||||||||||| |||||||| |||||||||||||||||| Sbjct 1 TGAACGAGCCCCATGAAAGACAGGACACCGTTCCCCCCTTAAGATAAGGGATAGGCAAAC 60 Query 9242 GGTTATGTTTATGACTAACAGCAACGACAAGAGCGGTGAGCTATTGGGTCAGGAGCGGCG 9301 || ||||||||||||||||||||| | ||| | || || | | || |||||||| || Sbjct 61 GGGTATGTTTATGACTAACAGCAATAATAAGGGTGGCGAATTGCTCGGCCAGGAGCGCCG 120 Query 9302 GCGCCGCTGGAGCCCAGAGCAAAAGCTGGCGATGGTTCGCGAGAGCCTTGAGCCAGGACA 9361 ||| ||||||||| | || || |||||||| |||||||||||||||||||| || ||||| Sbjct 121 GCGTCGCTGGAGCACCGACCAGAAGCTGGCCATGGTTCGCGAGAGCCTTGAACCGGGACA 180 Query 9362 CAGCGTTTCGGTGGTGGCCCGGCGCAACGGCGTCAATGCCAATCAACTATTTCACTGGCG 9421 ||||| || ||||||||||| ||||||||| | || ||||| || || || | ||||| Sbjct 181 AAGCGTGTCCGTGGTGGCCCGACGCAACGGCATTAACGCCAACCAGCTGTTCCTGTGGCG 240 Query 9422 CAAGCTTTACCAGGACGGAAGTTTGTCGGCGGTCAGCGCCGGTGAAGCCGTGGTGCCTGC 9481 |||||| |||||||||||||| |||||||||||||| || || |||||||| || || || Sbjct 241 CAAGCTGTACCAGGACGGAAGCTTGTCGGCGGTCAGTGCTGGCGAAGCCGTTGTACCGGC 300 Query 9482 GTCCGAGTTGAGCGATGCGCTCAGGCAGATTCGTGAGCTACAACGGATGCTGGGCAAGAA 9541 ||| || ||| ||||||||||| |||||| || || | || ||||||||||||||||| Sbjct 301 GTCGGAACTGACCGATGCGCTCAAGCAGATCCGCGAATTGCAGCGGATGCTGGGCAAGAA 360 Query 9542 GACGATGGAAGCCGAAGTCCTCAAAGAGGCCGTGGAGATAGCCCGCTCGCGAAAATGGAT 9601 |||||||||||||||||| || ||||||||||| ||||| ||||| |||||||||||||| Sbjct 361 GACGATGGAAGCCGAAGTTCTAAAAGAGGCCGTAGAGATCGCCCGGTCGCGAAAATGGAT 420 Query 9602 TGCGC 9606 ||||| Sbjct 421 TGCGC 425 >seq3088363 Length=10094 Score = 251 bits (278), Expect = 2e-62 Identities = 263/345 (76%), Gaps = 18/345 (5%) Strand=Plus/Plus Query 9179 ACCTGAACGAGCCCCCTGAAAGACAGGACACCGTTTCCCCCTTACGATAAGGGATAGGCA 9238 || |||||||||||| |||||||||||| | ||| || ||||| |||||| Sbjct 3777 ACGTGAACGAGCCCCTTGAAAGACAGGATAT----------TTAAGAGAAGGGGTAGGCA 3826 Query 9239 AACGGTTATGTTTATGACTAACAGCAACGACAAGAG---CGGTGAGCTATTGGGTCAGGA 9295 |||| ||||||| ||||||||| ||||||||| | |||| | | |||| || Sbjct 3827 GACGGGTATGTTT--GACTAACAGTAACGACAAGGGTGACGGTAAATCGCTTAGTCAAGA 3884 Query 9296 GCGGCGGCGCCGCTGGAGCCCAGAGCAAAAGCTGGCGATGGTTCGCGAGAGCCTTGAGCC 9355 |||||||||| ||| |||| ||| | |||||||| ||||| ||| ||||||| ||||| Sbjct 3885 GCGGCGGCGC---TGGGGCCCCGAGTAGAAGCTGGCCATGGTGCGCAAGAGCCTGGAGCC 3941 Query 9356 AGGACACAGCGTTTCGGTGGTGGCCCGGCGCAACGGCGTCAATGCCAATCAACTATTTCA 9415 || || ||||| ||||| || ||| |||||||||| | |||||||| | || || | Sbjct 3942 CGGGCAGAGCGTCTCGGTAGTCGCCAGGCGCAACGGTATGAATGCCAACTAGCTTTTCCT 4001 Query 9416 CTGGCGCAAGCTTTACCAGGACGGAAGTTTGTCGGCGGTCAGCGCCGGTGAAGCCGTGGT 9475 ||||||||||||||| |||| | || |||||||| ||||| |||||||| ||||| || Sbjct 4002 GTGGCGCAAGCTTTACAAGGAAGCCAGCTTGTCGGCAGTCAGTGCCGGTGAGGCCGTCGT 4061 Query 9476 GCCTGCGTCCGAGTTGAGCGATGCGCTCAGGCAGATTCGTGAGCT 9520 || || || ||| ||| ||||||||| | ||| |||| |||||| Sbjct 4062 TCCGGCCTCTGAGCTGAACGATGCGCTAAAGCAAATTCTTGAGCT 4106 Score = 100 bits (110), Expect = 8e-17 Identities = 60/63 (95%), Gaps = 0/63 (0%) Strand=Plus/Minus Query 9181 CTGAACGAGCCCCCTGAAAGACAGGACACCGTTTCCCCCTTACGATAAGGGATAGGCAAA 9240 ||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct 64 CTGAACGAGCCCCATGAAAGACAGGACACCGTTCCCCCCTTAAGATAAGGGATAGGCAAA 5 Query 9241 CGG 9243 ||| Sbjct 4 CGG 2 >seq2125050 Length=127 Score = 179 bits (198), Expect = 1e-40 Identities = 116/127 (91%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 9548 GGAAGCCGAAGTCCTCAAAGAGGCCGTGGAGATAGCCCGCTCGCGAAAATGGATTGCGCA 9607 |||||||||||| || ||||||||||| ||||| ||||| |||||||||||||||||||| Sbjct 1 GGAAGCCGAAGTTCTAAAAGAGGCCGTAGAGATCGCCCGGTCGCGAAAATGGATTGCGCA 60 Query 9608 CTCACCCTTGTTGCCGGGGGACGGTCAGTGAAACTGGTCAGTGAATGTCTCGGTGTGGCG 9667 ||| ||||||||||||||||||| ||||||| |||||||| ||||||||||||||||| Sbjct 61 CTCCCCCTTGTTGCCGGGGGACGACCAGTGAAGCTGGTCAGCAAATGTCTCGGTGTGGCG 120 Query 9668 CGCTCGC 9674 ||||||| Sbjct 121 CGCTCGC 127 >seq1778666 Length=127 Score = 179 bits (198), Expect = 1e-40 Identities = 116/127 (91%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 9544 CGATGGAAGCCGAAGTCCTCAAAGAGGCCGTGGAGATAGCCCGCTCGCGAAAATGGATTG 9603 |||||||||||||||| || ||||||||||| ||||| ||||| |||||||||||||||| Sbjct 127 CGATGGAAGCCGAAGTTCTAAAAGAGGCCGTAGAGATCGCCCGGTCGCGAAAATGGATTG 68 Query 9604 CGCACTCACCCTTGTTGCCGGGGGACGGTCAGTGAAACTGGTCAGTGAATGTCTCGGTGT 9663 ||| ||||||||||||||||||||||| ||||||| |||||||| ||||||||||||| Sbjct 67 CGCCCTCACCCTTGTTGCCGGGGGACGACCAGTGAAGCTGGTCAGCAAATGTCTCGGTGT 8 Query 9664 GGCGCGC 9670 ||||||| Sbjct 7 GGCGCGC 1 >seq1451710 Length=123 Score = 178 bits (196), Expect = 3e-40 Identities = 113/123 (92%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 9548 GGAAGCCGAAGTCCTCAAAGAGGCCGTGGAGATAGCCCGCTCGCGAAAATGGATTGCGCA 9607 |||||||||||| || ||||||||||| ||||| ||||| |||||||||||||||||||| Sbjct 1 GGAAGCCGAAGTTCTAAAAGAGGCCGTAGAGATCGCCCGGTCGCGAAAATGGATTGCGCA 60 Query 9608 CTCACCCTTGTTGCCGGGGGACGGTCAGTGAAACTGGTCAGTGAATGTCTCGGTGTGGCG 9667 ||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||| Sbjct 61 CTCACCCTTGTTGCCGGGGGACGACCAGTGAAGCTGGTCAGCAAATGTCTCGGTGTGGCG 120 Query 9668 CGC 9670 ||| Sbjct 121 CGC 123 >seq1901267 Length=127 Score = 168 bits (186), Expect = 2e-37 Identities = 113/126 (90%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 10021 ACTGAGCGTGACCTTTGCCCTGGACTGCTGTGATCGCGAAGCCATCGGCTGGGTGGCCAG 10080 ||||||||| ||||| |||||||| |||||||| || ||||||||||||||||| || || Sbjct 127 ACTGAGCGTAACCTTCGCCCTGGATTGCTGTGACCGTGAAGCCATCGGCTGGGTCGCGAG 68 Query 10081 CCCGACCGGCTACAGCGGCGATGACATACGCGACTTGATGCTGGAAAGCGTGGAGAAGCG 10140 ||| ||||| |||||||||||||| || ||||| |||||||||||||||||||||| ||| Sbjct 67 CCCCACCGGATACAGCGGCGATGATATCCGCGATTTGATGCTGGAAAGCGTGGAGAGGCG 8 Query 10141 TTTTGG 10146 |||||| Sbjct 7 TTTTGG 2 >seq2056270 Length=127 Score = 165 bits (182), Expect = 2e-36 Identities = 112/126 (89%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 10011 ACGGTGCGAAACTGAGCGTGACCTTTGCCCTGGACTGCTGTGATCGCGAAGCCATCGGCT 10070 |||| || ||||||||||| ||||| |||||||| |||||||| || ||||||||||||| Sbjct 1 ACGGCGCCAAACTGAGCGTAACCTTCGCCCTGGATTGCTGTGACCGTGAAGCCATCGGCT 60 Query 10071 GGGTGGCCAGCCCGACCGGCTACAGCGGCGATGACATACGCGACTTGATGCTGGAAAGCG 10130 ||| || ||||||||||| |||||||||||||| || ||||| |||||||||||||||| Sbjct 61 GGGGCGCGAGCCCGACCGGATACAGCGGCGATGATATCCGCGATTTGATGCTGGAAAGCG 120 Query 10131 TGGAGA 10136 |||||| Sbjct 121 TGGAGA 126 >seq1153466 Length=117 Score = 159 bits (176), Expect = 9e-35 Identities = 105/116 (91%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 10021 ACTGAGCGTGACCTTTGCCCTGGACTGCTGTGATCGCGAAGCCATCGGCTGGGTGGCCAG 10080 ||||||||| ||||| |||||||| |||||||| || ||||||||||||||||| || || Sbjct 117 ACTGAGCGTAACCTTCGCCCTGGATTGCTGTGACCGTGAAGCCATCGGCTGGGTCGCGAG 58 Query 10081 CCCGACCGGCTACAGCGGCGATGACATACGCGACTTGATGCTGGAAAGCGTGGAGA 10136 ||||||||| |||||||||||||| || ||||| |||||||||||||||||||||| Sbjct 57 CCCGACCGGATACAGCGGCGATGATATCCGCGATTTGATGCTGGAAAGCGTGGAGA 2 >seq2881747 Length=304 Score = 120 bits (132), Expect = 8e-23 Identities = 214/309 (69%), Gaps = 14/309 (5%) Strand=Plus/Minus Query 3167 ACCTGGCTGCGCGATGGTGAGGGCCTGGCGCAGAAGCTGATGGGACGAGTCCCGAACTAC 3226 ||||||||||||||||| |||| || || |||||| | |||| || | |||| | Sbjct 304 ACCTGGCTGCGCGATGGCGAGGCGCTCGCCCAGAAGTTATTGGGCAAGGTGGCCAACTTC 245 Query 3227 ACGT-TCGCCACGTCGGTGCCTTTTGCCCTGGAGCTGCTGGAGCCCGACTACTTGCCCTT 3285 | | || ||| | | ||||| |||||||| ||||||| || |||||| |||||| Sbjct 244 AAGCATCTGCACAAAG-TACCTTTCACCCTGGAGTTGCTGGAACCGGACTACCTGCCCTG 186 Query 3286 CAGCTACAACAACCTGTCGAAGGGTATTGTTCAGGGTATCGAGCGTGACACCTGGCGCCG 3345 ||||||||| || ||||| || ||| ||||| ||| ||||||| |||||||||| Sbjct 185 GAGCTACAACGACGAATCGAAAGGGATTTGCCAGGGCATCACGCGTGACGCCTGGCGCCG 126 Query 3346 GAAAAGGGCCTATCACCTTCTCAAGGATCACCCCGGCAACCTGCAGACGCTGGGCGGCAG 3405 | | | | |||| || ||| ||||||||| | || | |||| ||| Sbjct 125 GGTCACCGGTTTCAACCTGCTGAAGCGTCACCCCGGTA--GTG----CCTTGGGATTCAG 72 Query 3406 CCTGGCGGTG------AAGCGCGTCGAAGCGGAACGGATCATCCACATCGCCTACCGCAA 3459 | || ||||| ||| || ||||| ||||| | |||||||| |||||||| Sbjct 71 CATGTCGGTGGATACCAAGTTTGTGCCGGCGGACCGGATGTTGCACATCGCGTACCGCAA 12 Query 3460 GCGGATCGG 3468 |||||| || Sbjct 11 GCGGATTGG 3 >seq2723185 Length=204 Score = 109 bits (120), Expect = 1e-19 Identities = 122/163 (75%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 23817 TGTACCACTTTTGTACCAATCGCGAACCGATCAAGCTTATCGAGCTCGGCTCTGTCGGCA 23876 ||||||| ||||||||||||| | | |||||||| ||| ||| | ||| || Sbjct 42 TGTACCAATTTTGTACCAATCAGGCTTTGCTCAAGCTTCCCGACTTCGCTCCAGTCTTCA 101 Query 23877 TCAGAGTTCATCCACTTCGCATAGGTGGACAGTAGCATTTGTACGCTATGACCGAGCTGA 23936 ||||| ||||| ||||| || | ||| |||||||| ||||| |||||||||||| Sbjct 102 CTGGAGTTGATCCATCGGGCATAAGTCGTCAGCAGCATTTGCACGCTGTGACCGAGCTGA 161 Query 23937 TTCGCAATGAACGCCGGATTCATCCCCGCCATTAGGCACATGG 23979 || || |||||| | | ||||| || ||||||| |||||||| Sbjct 162 TTAGCGATGAACCCAAGGTTCATGCCTGCCATTAAGCACATGG 204 >seq3088504 Length=21722 Score = 98.7 bits (108), Expect = 3e-16 Identities = 59/62 (95%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 9182 TGAACGAGCCCCCTGAAAGACAGGACACCGTTTCCCCCTTACGATAAGGGATAGGCAAAC 9241 |||||||||||| ||||||||||||||||||| |||||||| |||||||||||||||||| Sbjct 21661 TGAACGAGCCCCATGAAAGACAGGACACCGTTCCCCCCTTAAGATAAGGGATAGGCAAAC 21720 Query 9242 GG 9243 || Sbjct 21721 GG 21722 >seq3087573 Length=5412 Score = 98.7 bits (108), Expect = 3e-16 Identities = 60/64 (94%), Gaps = 0/64 (0%) Strand=Plus/Minus Query 10446 GGCGCTTGGCAGCAGCATCAATTTAACGGGGAGTTGGTGTCCGGTTTGGTAGGGGCAAGT 10505 |||||||||| |||||||||||||||||||||||||||||||||||| |||||||| | | Sbjct 5412 GGCGCTTGGCGGCAGCATCAATTTAACGGGGAGTTGGTGTCCGGTTTTGTAGGGGCTAAT 5353 Query 10506 CCAC 10509 |||| Sbjct 5352 CCAC 5349 >seq2950908 Length=448 Score = 98.7 bits (108), Expect = 3e-16 Identities = 59/62 (95%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 9182 TGAACGAGCCCCCTGAAAGACAGGACACCGTTTCCCCCTTACGATAAGGGATAGGCAAAC 9241 |||||||||||| ||||||||||||||||||| |||||||| |||||||||||||||||| Sbjct 62 TGAACGAGCCCCATGAAAGACAGGACACCGTTCCCCCCTTAAGATAAGGGATAGGCAAAC 3 Query 9242 GG 9243 || Sbjct 2 GG 1 >seq277625 Length=52836 Score = 96.9 bits (106), Expect = 9e-16 Identities = 135/187 (72%), Gaps = 2/187 (1%) Strand=Plus/Minus Query 31092 CCCCGGCGGAAGGCTTCGAGGACGAGCCCGCGCACGCTGCGCACGCCCATCTTGAATTTC 31151 || || ||| |||| || | || || || || | ||||||||| |||| |||||| ||| Sbjct 45604 CCGCGCCGGTAGGCCTCCATCACTAGTCCACGAATGCTGCGCACACCCAGCTTGAACTTC 45545 Query 31152 GCGTCGTCGAGACGTTTCTCGACAGTCCCAGGGGCGATACCCATGCGCCGCGCGACTTCC 31211 |||||||| | ||| || ||| |||| || | ||| ||||| |||| |||| || Sbjct 45544 GCGTCGTCCAAACGCTTTGAGACGGTCCTTGGAGTGATGCCCATCAGCCGTGCGATCTCT 45485 Query 31212 TTCGCGGTC-AGTTCGCTGGCGCTCCAGGCGGTAGCTTCGAGTTCGCGGGGAGCCAGGCC 31270 || |||||| ||| |||| ||| || || ||||| || || ||||| || ||||| Sbjct 45484 TTAGCGGTCAAGTCTGCTGCCGC-GTAGAGAGTGGCTTCCAGCTCTCGGGGGGCAAGGCC 45426 Query 31271 GAGGCCC 31277 ||||| Sbjct 45425 TTGGCCC 45419 >seq3088319 Length=9201 Score = 95.1 bits (104), Expect = 3e-15 Identities = 58/62 (94%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 10447 GCGCTTGGCAGCAGCATCAATTTAACGGGGAGTTGGTGTCCGGTTTGGTAGGGGCAAGTC 10506 ||||||||| |||||||||||||||||||||||||||||||||||| |||||||| | || Sbjct 1 GCGCTTGGCGGCAGCATCAATTTAACGGGGAGTTGGTGTCCGGTTTTGTAGGGGCTAATC 60 Query 10507 CA 10508 || Sbjct 61 CA 62 >seq3087763 Length=5923 Score = 95.1 bits (104), Expect = 3e-15 Identities = 58/62 (94%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 10447 GCGCTTGGCAGCAGCATCAATTTAACGGGGAGTTGGTGTCCGGTTTGGTAGGGGCAAGTC 10506 ||||||||| |||||||||||||||||||||||||||||||||||| |||||||| | || Sbjct 1 GCGCTTGGCGGCAGCATCAATTTAACGGGGAGTTGGTGTCCGGTTTTGTAGGGGCTAATC 60 Query 10507 CA 10508 || Sbjct 61 CA 62 >seq3088492 Length=18035 Score = 93.3 bits (102), Expect = 1e-14 Identities = 172/250 (69%), Gaps = 12/250 (5%) Strand=Plus/Minus Query 36213 TCTGTCTTTGAGTTCCATGTTTAGCATTCTAAACATCTGGCGGTTTAGATAACTTGCGCG 36272 || |||||||| |||||| ||||| |||||||||| | ||||||||||||| | Sbjct 6261 TCGGTCTTTGAATTCCATATTTAGGATTCTAAACAAATCAGTGTTTAGATAACTT----G 6206 Query 36273 CCTTG----GTTTATTTTTCTAAACTCGCGAAAAACCAAGGAGCCAGCCAAATGACCTAC 36328 ||||| ||| | |||||||||| | ||| |||| ||| ||||||||| Sbjct 6205 CCTTGTGTAGTTAAGAACTCTAAACTCGGCGTAGACCCTGGAGACAGAACCATGACCTAC 6146 Query 36329 GAAGAGGCGCTCACCCATTTCAAAACGGGGCGCGCCATTGCTGTGGCCCTGGGGGTGAGT 36388 || || || || || |||||| || || ||||| |||| | |||||||| |||| Sbjct 6145 GACGAAGCACTGACACATTTCGGCACTGGCCGCGCTATTGGCGACGCCCTGGGCGTGA-- 6088 Query 36389 CCTG--GGCGGATTTCACAGTGCAAGTCGGAGGGTGGATTTTCGTACCAGCACCAATGCG 36446 || | | || | || |||||| || || || || || |||| ||||||| Sbjct 6087 CCAGCAGCCGCGTATCTCAGTGCCGCACGACCGGCGGGTTCTCCTACCCAATGCAATGCG 6028 Query 36447 TGCTGGAAAA 36456 | |||||||| Sbjct 6027 TCCTGGAAAA 6018 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133290123169098