Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09]
3,088,511 sequences; 2,785,377,831 total letters
Query= NC_031091.1
Length=43277
Score E
Sequences producing significant alignments: (Bits) Value
seq3088233 571 2e-158
seq2955279 536 3e-148
seq2942857 513 4e-141
seq2943337 488 1e-133
seq3088363 251 2e-62
seq2125050 179 1e-40
seq1778666 179 1e-40
seq1451710 178 3e-40
seq1901267 168 2e-37
seq2056270 165 2e-36
seq1153466 159 9e-35
seq2881747 120 8e-23
seq2723185 109 1e-19
seq3088504 98.7 3e-16
seq3087573 98.7 3e-16
seq2950908 98.7 3e-16
seq277625 96.9 9e-16
seq3088319 95.1 3e-15
seq3087763 95.1 3e-15
seq3088492 93.3 1e-14
>seq3088233
Length=8288
Score = 571 bits (632), Expect = 2e-158
Identities = 394/446 (88%), Gaps = 0/446 (0%)
Strand=Plus/Plus
Query 9183 GAACGAGCCCCCTGAAAGACAGGACACCGTTTCCCCCTTACGATAAGGGATAGGCAAACG 9242
||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 6588 GAACGAGCCCCATGAAAGACAGGACACCGTTTCCCTCTTACGATAAGGGATAGGCAAACG 6647
Query 9243 GTTATGTTTATGACTAACAGCAACGACAAGAGCGGTGAGCTATTGGGTCAGGAGCGGCGG 9302
|||||||||||||||||||| ||||| ||||| || ||||| ||||| ||||||||||||
Sbjct 6648 GTTATGTTTATGACTAACAGTAACGATAAGAGTGGGGAGCTTTTGGGCCAGGAGCGGCGG 6707
Query 9303 CGCCGCTGGAGCCCAGAGCAAAAGCTGGCGATGGTTCGCGAGAGCCTTGAGCCAGGACAC 9362
||||| ||||||||||||||||| ||| | |||||||||||||| |||||||| || |
Sbjct 6708 CGCCGTTGGAGCCCAGAGCAAAAACTGACCATGGTTCGCGAGAGTCTTGAGCCGGGGAAA 6767
Query 9363 AGCGTTTCGGTGGTGGCCCGGCGCAACGGCGTCAATGCCAATCAACTATTTCACTGGCGC 9422
|||||||| |||||||| |||||||| ||| |||||||||| || || || | ||||||
Sbjct 6768 AGCGTTTCAGTGGTGGCTCGGCGCAATGGCATCAATGCCAACCAGCTGTTCCTGTGGCGC 6827
Query 9423 AAGCTTTACCAGGACGGAAGTTTGTCGGCGGTCAGCGCCGGTGAAGCCGTGGTGCCTGCG 9482
||| | || |||||||| || |||||||||||||| || || ||||| |||||||||||
Sbjct 6828 AAGTTGTATCAGGACGGCAGCTTGTCGGCGGTCAGTGCTGGCGAAGCTGTGGTGCCTGCC 6887
Query 9483 TCCGAGTTGAGCGATGCGCTCAGGCAGATTCGTGAGCTACAACGGATGCTGGGCAAGAAG 9542
|||||||| |||||| |||||| |||||| | ||| || ||||||||||||||||||||
Sbjct 6888 TCCGAGTTTAGCGATTCGCTCAAGCAGATCCTTGAACTGCAACGGATGCTGGGCAAGAAA 6947
Query 9543 ACGATGGAAGCCGAAGTCCTCAAAGAGGCCGTGGAGATAGCCCGCTCGCGAAAATGGATT 9602
||||||||||| ||| |||||||||||||||||||||| |||| |||||||||||||||
Sbjct 6948 ACGATGGAAGCAGAAATCCTCAAAGAGGCCGTGGAGATCGCCCAGTCGCGAAAATGGATT 7007
Query 9603 GCGCACTCACCCTTGTTGCCGGGGGA 9628
||||||||||||||||||| | ||||
Sbjct 7008 GCGCACTCACCCTTGTTGCTGAGGGA 7033
Score = 95.1 bits (104), Expect = 3e-15
Identities = 68/77 (88%), Gaps = 1/77 (1%)
Strand=Plus/Plus
Query 10432 GCCGAGGGAATTCAGGCGCTTGGCAGCAGCATCAATTTAACGGGGAGTTGGTGTCCGGTT 10491
|| |||||| |||||||||| || |||||||||||||| |||||| |||||||||||||
Sbjct 7025 GCTGAGGGAGTTCAGGCGCTCCGCGGCAGCATCAATTTA-CGGGGAATTGGTGTCCGGTT 7083
Query 10492 TGGTAGGGGCAAGTCCA 10508
||| || ||||||||||
Sbjct 7084 TGGCAGCGGCAAGTCCA 7100
>seq2955279
Length=462
Score = 536 bits (594), Expect = 3e-148
Identities = 396/462 (86%), Gaps = 0/462 (0%)
Strand=Plus/Minus
Query 9612 CCCTTGTTGCCGGGGGACGGTCAGTGAAACTGGTCAGTGAATGTCTCGGTGTGGCGCGCT 9671
||||||||||||||||||| ||||||| |||||||| |||||||||||||||||||||
Sbjct 462 CCCTTGTTGCCGGGGGACGACCAGTGAAGCTGGTCAGCAAATGTCTCGGTGTGGCGCGCT 403
Query 9672 CGCAATTAACGGTTCGACTCAAACAATCGGTATCGCCCAAAATACGGCGGCGCAGGCCGA 9731
|||||||||||||||| |||| |||||| ||||||||| | ||||||| |||||||
Sbjct 402 CGCAATTAACGGTTCGGATCAAGCAATCGCTATCGCCCAGAGTACGGCGAAGCAGGCCTG 343
Query 9732 TGAACGATACGGAGCTCGTCGCTGAAATCCAGCAACAAGTCAGCGAACTGCCCAGCTACG 9791
|||| || | ||| | || | ||||| |||||||| |||||||| ||||||||||| |
Sbjct 342 TGAATGACGCTGAGTTGGTAGTCGAAATTCAGCAACAGGTCAGCGAGCTGCCCAGCTATG 283
Query 9792 GTTACCGCCGTGTTTGGGGATTGCTGCGCCGCGCGCGCGAAAAGCAGTCGCTGCCCGCGA 9851
| ||||| || || |||||||| |||||||| || || |||||||| || || ||||
Sbjct 282 GCTACCGTCGCGTCTGGGGATTACTGCGCCGTGCACGAGAAAAGCAACGACTCCCTGCGA 223
Query 9852 TCAACGTAAAACGGGTTTACCGAGTCATGCGTGATCACAACCTGCTGCTTGAGCGGCGCA 9911
|||| ||||| ||||||||||| |||||||||||||||||||||||||||||||| || |
Sbjct 222 TCAATGTAAAGCGGGTTTACCGGGTCATGCGTGATCACAACCTGCTGCTTGAGCGCCGGA 163
Query 9912 TCAAGCAGCCCGGCGTACCGCGCCGGCATGAAGGCCGTATCGCCGTTAACACCAGCGACA 9971
|||| ||||||||||| ||||| ||||| ||||||||||||||||| || |||||||| |
Sbjct 162 TCAAACAGCCCGGCGTGCCGCGTCGGCACGAAGGCCGTATCGCCGTGAAAACCAGCGATA 103
Query 9972 CGCGCTGGTGCTCGGATGGCTTCGAATTCCGCTGCGACGACGGTGCGAAACTGAGCGTGA 10031
|||| ||||||||||| ||||| || ||||||||||| ||||| || ||||||||||| |
Sbjct 102 CGCGTTGGTGCTCGGACGGCTTTGAGTTCCGCTGCGAGGACGGCGCCAAACTGAGCGTAA 43
Query 10032 CCTTTGCCCTGGACTGCTGTGATCGCGAAGCCATCGGCTGGG 10073
|||| |||||||| |||||||| || ||||||||||||||||
Sbjct 42 CCTTCGCCCTGGATTGCTGTGACCGTGAAGCCATCGGCTGGG 1
>seq2942857
Length=424
Score = 513 bits (568), Expect = 4e-141
Identities = 368/424 (87%), Gaps = 0/424 (0%)
Strand=Plus/Plus
Query 10085 ACCGGCTACAGCGGCGATGACATACGCGACTTGATGCTGGAAAGCGTGGAGAAGCGTTTT 10144
||||| |||||||||||||| || ||||| |||||||||||||||||||||| |||||||
Sbjct 1 ACCGGATACAGCGGCGATGATATCCGCGATTTGATGCTGGAAAGCGTGGAGAGGCGTTTT 60
Query 10145 GGCGACCTACTGCCGACCACACCGGTGCAATGGCTAAGCGATAACGGTTCGGCCTACATC 10204
|| || | |||||| ||||| || || |||||||||||||| || |||||||| |||| |
Sbjct 61 GGTGATCAACTGCCCACCACGCCAGTTCAATGGCTAAGCGACAATGGTTCGGCGTACACC 120
Query 10205 GCTGAACAGACGCGCCTGTTTGCTCGACAGATTGGCCTACAGCCAGTGACCACGCCGGTA 10264
||||||||||||||| ||||| || ||||| || | | || ||||| || |||||
Sbjct 121 GCTGAACAGACGCGCGCATTTGCCCGGCAGATCGGTTTGGAACCGGTGACAACACCGGTG 180
Query 10265 CGCAGCCCGCAGAGCAACGGCATGGCAGAGAGCTTCGTTAAGACAATCAAGCGCGACTAC 10324
|| |||||||| |||||||||||||| ||||||||||| ||||| ||||||| ||||||
Sbjct 181 CGTAGCCCGCAAAGCAACGGCATGGCCGAGAGCTTCGTAAAGACCCTCAAGCGTGACTAC 240
Query 10325 GTGGCGCACATGCCCAAGCCGGATCGAGAGACAGCCTTGCGCAACCTGACGATTGCCTTC 10384
|||||||| |||||||| || |||||||| || || |||| |||||| | |||||||||
Sbjct 241 GTGGCGCATATGCCCAAACCAGATCGAGAAACGGCGCTGCGTAACCTGGCAATTGCCTTC 300
Query 10385 GAGCATTACAACGAGCAGCATCCGCACAGCGCCTTGAAATACCGCTCGCCGAGGGAATTC 10444
||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||| |||
Sbjct 301 GAGCATTACAACGAGCAGCATCCACACAGCGCCTTGAAATATCGCTCACCGAGGGAGTTC 360
Query 10445 AGGCGCTTGGCAGCAGCATCAATTTAACGGGGAGTTGGTGTCCGGTTTGGTAGGGGCAAG 10504
||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct 361 AGGCGCTTGGCGGCAGCATCAATTTAACGGGGAGTTGGTGTCCGGTTTTGTAGGGGCTAA 420
Query 10505 TCCA 10508
||||
Sbjct 421 TCCA 424
>seq2943337
Length=425
Score = 488 bits (540), Expect = 1e-133
Identities = 363/425 (85%), Gaps = 0/425 (0%)
Strand=Plus/Plus
Query 9182 TGAACGAGCCCCCTGAAAGACAGGACACCGTTTCCCCCTTACGATAAGGGATAGGCAAAC 9241
|||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct 1 TGAACGAGCCCCATGAAAGACAGGACACCGTTCCCCCCTTAAGATAAGGGATAGGCAAAC 60
Query 9242 GGTTATGTTTATGACTAACAGCAACGACAAGAGCGGTGAGCTATTGGGTCAGGAGCGGCG 9301
|| ||||||||||||||||||||| | ||| | || || | | || |||||||| ||
Sbjct 61 GGGTATGTTTATGACTAACAGCAATAATAAGGGTGGCGAATTGCTCGGCCAGGAGCGCCG 120
Query 9302 GCGCCGCTGGAGCCCAGAGCAAAAGCTGGCGATGGTTCGCGAGAGCCTTGAGCCAGGACA 9361
||| ||||||||| | || || |||||||| |||||||||||||||||||| || |||||
Sbjct 121 GCGTCGCTGGAGCACCGACCAGAAGCTGGCCATGGTTCGCGAGAGCCTTGAACCGGGACA 180
Query 9362 CAGCGTTTCGGTGGTGGCCCGGCGCAACGGCGTCAATGCCAATCAACTATTTCACTGGCG 9421
||||| || ||||||||||| ||||||||| | || ||||| || || || | |||||
Sbjct 181 AAGCGTGTCCGTGGTGGCCCGACGCAACGGCATTAACGCCAACCAGCTGTTCCTGTGGCG 240
Query 9422 CAAGCTTTACCAGGACGGAAGTTTGTCGGCGGTCAGCGCCGGTGAAGCCGTGGTGCCTGC 9481
|||||| |||||||||||||| |||||||||||||| || || |||||||| || || ||
Sbjct 241 CAAGCTGTACCAGGACGGAAGCTTGTCGGCGGTCAGTGCTGGCGAAGCCGTTGTACCGGC 300
Query 9482 GTCCGAGTTGAGCGATGCGCTCAGGCAGATTCGTGAGCTACAACGGATGCTGGGCAAGAA 9541
||| || ||| ||||||||||| |||||| || || | || |||||||||||||||||
Sbjct 301 GTCGGAACTGACCGATGCGCTCAAGCAGATCCGCGAATTGCAGCGGATGCTGGGCAAGAA 360
Query 9542 GACGATGGAAGCCGAAGTCCTCAAAGAGGCCGTGGAGATAGCCCGCTCGCGAAAATGGAT 9601
|||||||||||||||||| || ||||||||||| ||||| ||||| ||||||||||||||
Sbjct 361 GACGATGGAAGCCGAAGTTCTAAAAGAGGCCGTAGAGATCGCCCGGTCGCGAAAATGGAT 420
Query 9602 TGCGC 9606
|||||
Sbjct 421 TGCGC 425
>seq3088363
Length=10094
Score = 251 bits (278), Expect = 2e-62
Identities = 263/345 (76%), Gaps = 18/345 (5%)
Strand=Plus/Plus
Query 9179 ACCTGAACGAGCCCCCTGAAAGACAGGACACCGTTTCCCCCTTACGATAAGGGATAGGCA 9238
|| |||||||||||| |||||||||||| | ||| || ||||| ||||||
Sbjct 3777 ACGTGAACGAGCCCCTTGAAAGACAGGATAT----------TTAAGAGAAGGGGTAGGCA 3826
Query 9239 AACGGTTATGTTTATGACTAACAGCAACGACAAGAG---CGGTGAGCTATTGGGTCAGGA 9295
|||| ||||||| ||||||||| ||||||||| | |||| | | |||| ||
Sbjct 3827 GACGGGTATGTTT--GACTAACAGTAACGACAAGGGTGACGGTAAATCGCTTAGTCAAGA 3884
Query 9296 GCGGCGGCGCCGCTGGAGCCCAGAGCAAAAGCTGGCGATGGTTCGCGAGAGCCTTGAGCC 9355
|||||||||| ||| |||| ||| | |||||||| ||||| ||| ||||||| |||||
Sbjct 3885 GCGGCGGCGC---TGGGGCCCCGAGTAGAAGCTGGCCATGGTGCGCAAGAGCCTGGAGCC 3941
Query 9356 AGGACACAGCGTTTCGGTGGTGGCCCGGCGCAACGGCGTCAATGCCAATCAACTATTTCA 9415
|| || ||||| ||||| || ||| |||||||||| | |||||||| | || || |
Sbjct 3942 CGGGCAGAGCGTCTCGGTAGTCGCCAGGCGCAACGGTATGAATGCCAACTAGCTTTTCCT 4001
Query 9416 CTGGCGCAAGCTTTACCAGGACGGAAGTTTGTCGGCGGTCAGCGCCGGTGAAGCCGTGGT 9475
||||||||||||||| |||| | || |||||||| ||||| |||||||| ||||| ||
Sbjct 4002 GTGGCGCAAGCTTTACAAGGAAGCCAGCTTGTCGGCAGTCAGTGCCGGTGAGGCCGTCGT 4061
Query 9476 GCCTGCGTCCGAGTTGAGCGATGCGCTCAGGCAGATTCGTGAGCT 9520
|| || || ||| ||| ||||||||| | ||| |||| ||||||
Sbjct 4062 TCCGGCCTCTGAGCTGAACGATGCGCTAAAGCAAATTCTTGAGCT 4106
Score = 100 bits (110), Expect = 8e-17
Identities = 60/63 (95%), Gaps = 0/63 (0%)
Strand=Plus/Minus
Query 9181 CTGAACGAGCCCCCTGAAAGACAGGACACCGTTTCCCCCTTACGATAAGGGATAGGCAAA 9240
||||||||||||| ||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct 64 CTGAACGAGCCCCATGAAAGACAGGACACCGTTCCCCCCTTAAGATAAGGGATAGGCAAA 5
Query 9241 CGG 9243
|||
Sbjct 4 CGG 2
>seq2125050
Length=127
Score = 179 bits (198), Expect = 1e-40
Identities = 116/127 (91%), Gaps = 0/127 (0%)
Strand=Plus/Plus
Query 9548 GGAAGCCGAAGTCCTCAAAGAGGCCGTGGAGATAGCCCGCTCGCGAAAATGGATTGCGCA 9607
|||||||||||| || ||||||||||| ||||| ||||| ||||||||||||||||||||
Sbjct 1 GGAAGCCGAAGTTCTAAAAGAGGCCGTAGAGATCGCCCGGTCGCGAAAATGGATTGCGCA 60
Query 9608 CTCACCCTTGTTGCCGGGGGACGGTCAGTGAAACTGGTCAGTGAATGTCTCGGTGTGGCG 9667
||| ||||||||||||||||||| ||||||| |||||||| |||||||||||||||||
Sbjct 61 CTCCCCCTTGTTGCCGGGGGACGACCAGTGAAGCTGGTCAGCAAATGTCTCGGTGTGGCG 120
Query 9668 CGCTCGC 9674
|||||||
Sbjct 121 CGCTCGC 127
>seq1778666
Length=127
Score = 179 bits (198), Expect = 1e-40
Identities = 116/127 (91%), Gaps = 0/127 (0%)
Strand=Plus/Minus
Query 9544 CGATGGAAGCCGAAGTCCTCAAAGAGGCCGTGGAGATAGCCCGCTCGCGAAAATGGATTG 9603
|||||||||||||||| || ||||||||||| ||||| ||||| ||||||||||||||||
Sbjct 127 CGATGGAAGCCGAAGTTCTAAAAGAGGCCGTAGAGATCGCCCGGTCGCGAAAATGGATTG 68
Query 9604 CGCACTCACCCTTGTTGCCGGGGGACGGTCAGTGAAACTGGTCAGTGAATGTCTCGGTGT 9663
||| ||||||||||||||||||||||| ||||||| |||||||| |||||||||||||
Sbjct 67 CGCCCTCACCCTTGTTGCCGGGGGACGACCAGTGAAGCTGGTCAGCAAATGTCTCGGTGT 8
Query 9664 GGCGCGC 9670
|||||||
Sbjct 7 GGCGCGC 1
>seq1451710
Length=123
Score = 178 bits (196), Expect = 3e-40
Identities = 113/123 (92%), Gaps = 0/123 (0%)
Strand=Plus/Plus
Query 9548 GGAAGCCGAAGTCCTCAAAGAGGCCGTGGAGATAGCCCGCTCGCGAAAATGGATTGCGCA 9607
|||||||||||| || ||||||||||| ||||| ||||| ||||||||||||||||||||
Sbjct 1 GGAAGCCGAAGTTCTAAAAGAGGCCGTAGAGATCGCCCGGTCGCGAAAATGGATTGCGCA 60
Query 9608 CTCACCCTTGTTGCCGGGGGACGGTCAGTGAAACTGGTCAGTGAATGTCTCGGTGTGGCG 9667
||||||||||||||||||||||| ||||||| |||||||| |||||||||||||||||
Sbjct 61 CTCACCCTTGTTGCCGGGGGACGACCAGTGAAGCTGGTCAGCAAATGTCTCGGTGTGGCG 120
Query 9668 CGC 9670
|||
Sbjct 121 CGC 123
>seq1901267
Length=127
Score = 168 bits (186), Expect = 2e-37
Identities = 113/126 (90%), Gaps = 0/126 (0%)
Strand=Plus/Minus
Query 10021 ACTGAGCGTGACCTTTGCCCTGGACTGCTGTGATCGCGAAGCCATCGGCTGGGTGGCCAG 10080
||||||||| ||||| |||||||| |||||||| || ||||||||||||||||| || ||
Sbjct 127 ACTGAGCGTAACCTTCGCCCTGGATTGCTGTGACCGTGAAGCCATCGGCTGGGTCGCGAG 68
Query 10081 CCCGACCGGCTACAGCGGCGATGACATACGCGACTTGATGCTGGAAAGCGTGGAGAAGCG 10140
||| ||||| |||||||||||||| || ||||| |||||||||||||||||||||| |||
Sbjct 67 CCCCACCGGATACAGCGGCGATGATATCCGCGATTTGATGCTGGAAAGCGTGGAGAGGCG 8
Query 10141 TTTTGG 10146
||||||
Sbjct 7 TTTTGG 2
>seq2056270
Length=127
Score = 165 bits (182), Expect = 2e-36
Identities = 112/126 (89%), Gaps = 0/126 (0%)
Strand=Plus/Plus
Query 10011 ACGGTGCGAAACTGAGCGTGACCTTTGCCCTGGACTGCTGTGATCGCGAAGCCATCGGCT 10070
|||| || ||||||||||| ||||| |||||||| |||||||| || |||||||||||||
Sbjct 1 ACGGCGCCAAACTGAGCGTAACCTTCGCCCTGGATTGCTGTGACCGTGAAGCCATCGGCT 60
Query 10071 GGGTGGCCAGCCCGACCGGCTACAGCGGCGATGACATACGCGACTTGATGCTGGAAAGCG 10130
||| || ||||||||||| |||||||||||||| || ||||| ||||||||||||||||
Sbjct 61 GGGGCGCGAGCCCGACCGGATACAGCGGCGATGATATCCGCGATTTGATGCTGGAAAGCG 120
Query 10131 TGGAGA 10136
||||||
Sbjct 121 TGGAGA 126
>seq1153466
Length=117
Score = 159 bits (176), Expect = 9e-35
Identities = 105/116 (91%), Gaps = 0/116 (0%)
Strand=Plus/Minus
Query 10021 ACTGAGCGTGACCTTTGCCCTGGACTGCTGTGATCGCGAAGCCATCGGCTGGGTGGCCAG 10080
||||||||| ||||| |||||||| |||||||| || ||||||||||||||||| || ||
Sbjct 117 ACTGAGCGTAACCTTCGCCCTGGATTGCTGTGACCGTGAAGCCATCGGCTGGGTCGCGAG 58
Query 10081 CCCGACCGGCTACAGCGGCGATGACATACGCGACTTGATGCTGGAAAGCGTGGAGA 10136
||||||||| |||||||||||||| || ||||| ||||||||||||||||||||||
Sbjct 57 CCCGACCGGATACAGCGGCGATGATATCCGCGATTTGATGCTGGAAAGCGTGGAGA 2
>seq2881747
Length=304
Score = 120 bits (132), Expect = 8e-23
Identities = 214/309 (69%), Gaps = 14/309 (5%)
Strand=Plus/Minus
Query 3167 ACCTGGCTGCGCGATGGTGAGGGCCTGGCGCAGAAGCTGATGGGACGAGTCCCGAACTAC 3226
||||||||||||||||| |||| || || |||||| | |||| || | |||| |
Sbjct 304 ACCTGGCTGCGCGATGGCGAGGCGCTCGCCCAGAAGTTATTGGGCAAGGTGGCCAACTTC 245
Query 3227 ACGT-TCGCCACGTCGGTGCCTTTTGCCCTGGAGCTGCTGGAGCCCGACTACTTGCCCTT 3285
| | || ||| | | ||||| |||||||| ||||||| || |||||| ||||||
Sbjct 244 AAGCATCTGCACAAAG-TACCTTTCACCCTGGAGTTGCTGGAACCGGACTACCTGCCCTG 186
Query 3286 CAGCTACAACAACCTGTCGAAGGGTATTGTTCAGGGTATCGAGCGTGACACCTGGCGCCG 3345
||||||||| || ||||| || ||| ||||| ||| ||||||| ||||||||||
Sbjct 185 GAGCTACAACGACGAATCGAAAGGGATTTGCCAGGGCATCACGCGTGACGCCTGGCGCCG 126
Query 3346 GAAAAGGGCCTATCACCTTCTCAAGGATCACCCCGGCAACCTGCAGACGCTGGGCGGCAG 3405
| | | | |||| || ||| ||||||||| | || | |||| |||
Sbjct 125 GGTCACCGGTTTCAACCTGCTGAAGCGTCACCCCGGTA--GTG----CCTTGGGATTCAG 72
Query 3406 CCTGGCGGTG------AAGCGCGTCGAAGCGGAACGGATCATCCACATCGCCTACCGCAA 3459
| || ||||| ||| || ||||| ||||| | |||||||| ||||||||
Sbjct 71 CATGTCGGTGGATACCAAGTTTGTGCCGGCGGACCGGATGTTGCACATCGCGTACCGCAA 12
Query 3460 GCGGATCGG 3468
|||||| ||
Sbjct 11 GCGGATTGG 3
>seq2723185
Length=204
Score = 109 bits (120), Expect = 1e-19
Identities = 122/163 (75%), Gaps = 0/163 (0%)
Strand=Plus/Plus
Query 23817 TGTACCACTTTTGTACCAATCGCGAACCGATCAAGCTTATCGAGCTCGGCTCTGTCGGCA 23876
||||||| ||||||||||||| | | |||||||| ||| ||| | ||| ||
Sbjct 42 TGTACCAATTTTGTACCAATCAGGCTTTGCTCAAGCTTCCCGACTTCGCTCCAGTCTTCA 101
Query 23877 TCAGAGTTCATCCACTTCGCATAGGTGGACAGTAGCATTTGTACGCTATGACCGAGCTGA 23936
||||| ||||| ||||| || | ||| |||||||| ||||| ||||||||||||
Sbjct 102 CTGGAGTTGATCCATCGGGCATAAGTCGTCAGCAGCATTTGCACGCTGTGACCGAGCTGA 161
Query 23937 TTCGCAATGAACGCCGGATTCATCCCCGCCATTAGGCACATGG 23979
|| || |||||| | | ||||| || ||||||| ||||||||
Sbjct 162 TTAGCGATGAACCCAAGGTTCATGCCTGCCATTAAGCACATGG 204
>seq3088504
Length=21722
Score = 98.7 bits (108), Expect = 3e-16
Identities = 59/62 (95%), Gaps = 0/62 (0%)
Strand=Plus/Plus
Query 9182 TGAACGAGCCCCCTGAAAGACAGGACACCGTTTCCCCCTTACGATAAGGGATAGGCAAAC 9241
|||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct 21661 TGAACGAGCCCCATGAAAGACAGGACACCGTTCCCCCCTTAAGATAAGGGATAGGCAAAC 21720
Query 9242 GG 9243
||
Sbjct 21721 GG 21722
>seq3087573
Length=5412
Score = 98.7 bits (108), Expect = 3e-16
Identities = 60/64 (94%), Gaps = 0/64 (0%)
Strand=Plus/Minus
Query 10446 GGCGCTTGGCAGCAGCATCAATTTAACGGGGAGTTGGTGTCCGGTTTGGTAGGGGCAAGT 10505
|||||||||| |||||||||||||||||||||||||||||||||||| |||||||| | |
Sbjct 5412 GGCGCTTGGCGGCAGCATCAATTTAACGGGGAGTTGGTGTCCGGTTTTGTAGGGGCTAAT 5353
Query 10506 CCAC 10509
||||
Sbjct 5352 CCAC 5349
>seq2950908
Length=448
Score = 98.7 bits (108), Expect = 3e-16
Identities = 59/62 (95%), Gaps = 0/62 (0%)
Strand=Plus/Minus
Query 9182 TGAACGAGCCCCCTGAAAGACAGGACACCGTTTCCCCCTTACGATAAGGGATAGGCAAAC 9241
|||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct 62 TGAACGAGCCCCATGAAAGACAGGACACCGTTCCCCCCTTAAGATAAGGGATAGGCAAAC 3
Query 9242 GG 9243
||
Sbjct 2 GG 1
>seq277625
Length=52836
Score = 96.9 bits (106), Expect = 9e-16
Identities = 135/187 (72%), Gaps = 2/187 (1%)
Strand=Plus/Minus
Query 31092 CCCCGGCGGAAGGCTTCGAGGACGAGCCCGCGCACGCTGCGCACGCCCATCTTGAATTTC 31151
|| || ||| |||| || | || || || || | ||||||||| |||| |||||| |||
Sbjct 45604 CCGCGCCGGTAGGCCTCCATCACTAGTCCACGAATGCTGCGCACACCCAGCTTGAACTTC 45545
Query 31152 GCGTCGTCGAGACGTTTCTCGACAGTCCCAGGGGCGATACCCATGCGCCGCGCGACTTCC 31211
|||||||| | ||| || ||| |||| || | ||| ||||| |||| |||| ||
Sbjct 45544 GCGTCGTCCAAACGCTTTGAGACGGTCCTTGGAGTGATGCCCATCAGCCGTGCGATCTCT 45485
Query 31212 TTCGCGGTC-AGTTCGCTGGCGCTCCAGGCGGTAGCTTCGAGTTCGCGGGGAGCCAGGCC 31270
|| |||||| ||| |||| ||| || || ||||| || || ||||| || |||||
Sbjct 45484 TTAGCGGTCAAGTCTGCTGCCGC-GTAGAGAGTGGCTTCCAGCTCTCGGGGGGCAAGGCC 45426
Query 31271 GAGGCCC 31277
|||||
Sbjct 45425 TTGGCCC 45419
>seq3088319
Length=9201
Score = 95.1 bits (104), Expect = 3e-15
Identities = 58/62 (94%), Gaps = 0/62 (0%)
Strand=Plus/Plus
Query 10447 GCGCTTGGCAGCAGCATCAATTTAACGGGGAGTTGGTGTCCGGTTTGGTAGGGGCAAGTC 10506
||||||||| |||||||||||||||||||||||||||||||||||| |||||||| | ||
Sbjct 1 GCGCTTGGCGGCAGCATCAATTTAACGGGGAGTTGGTGTCCGGTTTTGTAGGGGCTAATC 60
Query 10507 CA 10508
||
Sbjct 61 CA 62
>seq3087763
Length=5923
Score = 95.1 bits (104), Expect = 3e-15
Identities = 58/62 (94%), Gaps = 0/62 (0%)
Strand=Plus/Plus
Query 10447 GCGCTTGGCAGCAGCATCAATTTAACGGGGAGTTGGTGTCCGGTTTGGTAGGGGCAAGTC 10506
||||||||| |||||||||||||||||||||||||||||||||||| |||||||| | ||
Sbjct 1 GCGCTTGGCGGCAGCATCAATTTAACGGGGAGTTGGTGTCCGGTTTTGTAGGGGCTAATC 60
Query 10507 CA 10508
||
Sbjct 61 CA 62
>seq3088492
Length=18035
Score = 93.3 bits (102), Expect = 1e-14
Identities = 172/250 (69%), Gaps = 12/250 (5%)
Strand=Plus/Minus
Query 36213 TCTGTCTTTGAGTTCCATGTTTAGCATTCTAAACATCTGGCGGTTTAGATAACTTGCGCG 36272
|| |||||||| |||||| ||||| |||||||||| | ||||||||||||| |
Sbjct 6261 TCGGTCTTTGAATTCCATATTTAGGATTCTAAACAAATCAGTGTTTAGATAACTT----G 6206
Query 36273 CCTTG----GTTTATTTTTCTAAACTCGCGAAAAACCAAGGAGCCAGCCAAATGACCTAC 36328
||||| ||| | |||||||||| | ||| |||| ||| |||||||||
Sbjct 6205 CCTTGTGTAGTTAAGAACTCTAAACTCGGCGTAGACCCTGGAGACAGAACCATGACCTAC 6146
Query 36329 GAAGAGGCGCTCACCCATTTCAAAACGGGGCGCGCCATTGCTGTGGCCCTGGGGGTGAGT 36388
|| || || || || |||||| || || ||||| |||| | |||||||| ||||
Sbjct 6145 GACGAAGCACTGACACATTTCGGCACTGGCCGCGCTATTGGCGACGCCCTGGGCGTGA-- 6088
Query 36389 CCTG--GGCGGATTTCACAGTGCAAGTCGGAGGGTGGATTTTCGTACCAGCACCAATGCG 36446
|| | | || | || |||||| || || || || || |||| |||||||
Sbjct 6087 CCAGCAGCCGCGTATCTCAGTGCCGCACGACCGGCGGGTTCTCCTACCCAATGCAATGCG 6028
Query 36447 TGCTGGAAAA 36456
| ||||||||
Sbjct 6027 TCCTGGAAAA 6018
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 133290123169098
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |