Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09]
3,088,511 sequences; 2,785,377,831 total letters
Query= NC_031113.1
Length=44513
Score E
Sequences producing significant alignments: (Bits) Value
seq3088451 100 8e-17
>seq3088451
Length=13260
Score = 100 bits (110), Expect = 8e-17
Identities = 205/305 (67%), Gaps = 0/305 (0%)
Strand=Plus/Plus
Query 38271 CTGCGTTACCCGCTAACCGCGCTGTTGTTTGTGGAGTTCGACGCCAAAGCGTTCCAGAAC 38330
||||| ||||| ||||||||| |||| || |||||||||||| | |||| ||||
Sbjct 11844 CTGCGCTACCCAAACACCGCGCTGCTGTTCGTCGAGTTCGACGCCGAGCAGTTCACGAAC 11903
Query 38331 ATCCCGCGCGTGTCCATCAAGTGCAAAGGCCGCAAAGTTCTAATACCGAACAACTACGAC 38390
|| ||| |||| || | ||||| || | ||| | | |||| |||||||||
Sbjct 11904 ATTCCGGCCGTGACCGTGAAGTGTAAGGCGCGCCGGTGGCAGGTGCCGAGCAACTACGAT 11963
Query 38391 CCGATTAATCATACCTATTCCGGGGACTGGGACGGCACGTTTAAACGCGCATGGACGGAT 38450
||| | | ||||| ||||| | |||||||||||| | ||| || ||||| ||
Sbjct 11964 CCGGTGGCCCGCACCTACTCCGGCGCCTGGGACGGCACCATGAAAGAGGCCTGGACCAAT 12023
Query 38451 AACCCTGCGTGGCACTGGTACGATATTTGTATTACTGAGCGCTTCGGCCTCGGTCGGCGT 38510
||||| || ||| | |||| || || | || || || || || || || ||
Sbjct 12024 AACCCGGCCTGGATCACCTACGGCATCTGCACCCAAGACCGTTTTGGTCTGGGCCGCCGC 12083
Query 38511 ATCAAACCGCAAATGTTAAACCGGTACGCGCTCTACCAGATTGCGCAGCGCTGCGATCAG 38570
||||| ||| ||| | || || | ||| |||| || || ||| ||||| |||
Sbjct 12084 ATCAAGCCGTGGATGGTGGACAAGTGGGAGCTTTACCGAATCGCACAGTATTGCGACCAG 12143
Query 38571 TTGGT 38575
|||||
Sbjct 12144 TTGGT 12148
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 137100261984450
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |