Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09]
3,088,511 sequences; 2,785,377,831 total letters
Query= NC_031129.1
Length=103445
Score E
Sequences producing significant alignments: (Bits) Value
seq3047186 233 1e-56
seq3023355 226 2e-54
seq366846 226 2e-54
seq3087968 161 6e-35
seq2815396 158 8e-34
seq108461 145 5e-30
seq2453999 123 2e-23
seq325747 120 2e-22
seq3016640 109 3e-19
seq254255 109 3e-19
seq268701 95.1 8e-15
seq3085141 91.5 9e-14
seq2262318 91.5 9e-14
seq2951953 89.7 3e-13
seq2799564 84.2 1e-11
>seq3047186
Length=1103
Score = 233 bits (258), Expect = 1e-56
Identities = 488/723 (67%), Gaps = 12/723 (2%)
Strand=Plus/Minus
Query 96748 GCCAATTGGGCCATTTCGTTGCTTTCCGATAATTACCTCGGCAATGCCCTTCATTTCGCT 96807
||| || || || || || ||||| ||||| || | ||||||||||||||| ||| |
Sbjct 946 GCCGATAGGCCCGTTCCGCTGCTTGCCGATGATGATCTCGGCAATGCCCTTGTGTTCCGT 887
Query 96808 ATCCGGGTGATAAACTTCGTCGCGATACAAAAACATGATCAGGTCTGCGTCCTGCTCAAT 96867
|| |||||||| || |||||||| |||| |||||||||| ||| ||||||||||| ||
Sbjct 886 TTCGGGGTGATACACCTCGTCGCGGTACACGAACATGATCACGTCGGCGTCCTGCTCGAT 827
Query 96868 TGCTCCTGATTCACGTAAATCTGAATTTACCGGTCGTTTGTCCGCACGCTGTTCAAGCGA 96927
||||| |||||||| || || || || ||||| || |||| | || ||||| || ||
Sbjct 826 CGCTCCGGATTCACGCAAGTCGGAGTTCACCGGGCGCTTGTTGGGGCGTTGTTCCAGGGA 767
Query 96928 TCGATTAAGTTGTGACAATGCCACCACC-GGTACTTGTAATTCCTTCGCCAACGCCTTCA 96986
|| || || || |||| ||||||||| || | ||| |||||||| |||| || ||||
Sbjct 766 GCGGTTGAGCTGGGACAGCGCCACCACCGGGCAGTTG-AATTCCTTGGCCAGGGCTTTCA 708
Query 96987 GTGAGCGAGAAATCTCGGCAATTTCCAGCGTTCGGTTATCTTGCAGCT-----CCGGGAC 97041
| || || || || |||| ||| || || ||||| || || ||| ||||||
Sbjct 707 GGGAACGGGAGATTTCGGAAATCTCGTTGGTGCGGTTGTC--GCCGCTGGAACCCGGGAT 650
Query 97042 GCGCATAAGTTGCAGGTAGTCGATCATAATCATGCTCAAACCACCATTTTCTTTATAAAC 97101
|||| | ||||||||||||||||| |||| | | | || | ||| |
Sbjct 649 CTGCATCAACTGCAGGTAGTCGATCATGATCAGGGCGATGTCGCCGTGTTCACGCACCAG 590
Query 97102 ACGACGAGCGCGGGAACGTAGCTCTGTCGGCGTCAGGGCGCTTGAGTCATCAATAAAAAT 97161
|| || | || | ||| | ||||| || | | || | |||||| || || |
Sbjct 589 GCGGCGGGTACGCGCACGCATCTCTGAAGGGCTGATACCGGCGGTGTCATCGATGAACAG 530
Query 97162 ATTCTGCTTGTCCAACAGAATACCCATTGCGCCAGAAACCCGCGCCCAATCCTCGTCGTT 97221
|| | | || | ||| | || || | | || | ||| || ||||| |
Sbjct 529 CTTGCGGTCGTTAAGCAGGTTGACC---GCCGAGGTCAGGCGTGGCCAGTCGTCGTCCTC 473
Query 97222 AAGTTGCCCTGTTCGAATACGAGTCTGATCAACGCGTGCAAGAGAAGCCAGTGAGCGCAT 97281
| ||| || | || | ||||| || | || | || || | || |||||
Sbjct 472 CAATTGGCCGGAACGCACCTTGGTCTGGTCGATACGACCCAGGGACGAGAGCATACGCAT 413
Query 97282 CATCAGCTGGTGGCTCGGCATCTCAAGGCTAAAAACCAATACGGGCTTATCGTTACGAAC 97341
|||||| | | |||||||| ||| | |||| || | ||| ||| | || |
Sbjct 412 GATCAGCGATTCACCTGGCATCTCGAGGGAGTACACCAGCACCGCCTTGTCGCTGCGCAG 353
Query 97342 TGCGGCATTTTCGACGAGATTCATCGCAAACGTGGTCTTCCCCATAGATGGGCGGGCGGC 97401
| |||| || || || || ||||| || || |||||||| ||||| || || ||| ||||
Sbjct 352 TACGGCGTTCTCCACCAGGTTCATGGCGAAGGTGGTCTTACCCATCGAAGGACGGCCGGC 293
Query 97402 GACAATGATGAGATCGGACGACTGAAGCCCTGCCGTCTTCTTATTGAGATCGGTAAATCC 97461
||| ||||| || ||||||| ||| || || ||||||| || ||| |||||| | ||
Sbjct 292 GACGATGATCAGGTCGGACGGCTGCAGGCCGCTGGTCTTCTCATCGAGGTCGGTATAGCC 233
Query 97462 GGT 97464
|||
Sbjct 232 GGT 230
>seq3023355
Length=832
Score = 226 bits (250), Expect = 2e-54
Identities = 493/731 (67%), Gaps = 28/731 (4%)
Strand=Plus/Minus
Query 96748 GCCAATTGGGCCATTTCGTTGCTTTCCGATAATTACCTCGGCAATGCCCTTCATTTCGCT 96807
||| || || || || || ||||| ||||| || | |||||||||||| || || |
Sbjct 826 GCCGATCGGCCCGTTCCGCTGCTTGCCGATGATGATCTCGGCAATGCCTTTGTGCTCCGT 767
Query 96808 ATCCGGGTGATAAACTTCGTCGCGATACAAAAACATGATCAGGTCTGCGTCCTGCTCAAT 96867
|| |||||||| || |||||||| |||| |||||||||| ||| || |||||||| ||
Sbjct 766 CTCGGGGTGATACACCTCGTCGCGGTACACGAACATGATCACGTCGGCATCCTGCTCGAT 707
Query 96868 TGCTCCTGATTCACGTAAATCTGAATTTACCGGTCGTTTGTCCGCACGCTGTTCAAGCGA 96927
||||| ||||| || || || || || ||||| || |||| || || || || || ||
Sbjct 706 CGCTCCGGATTCCCGCAAGTCGGAGTTCACCGGGCGCTTGTTCGGCCGTTGCTCCAGGGA 647
Query 96928 TCGATTAAGTTGTGACAATGCCACCACC-GGTACTTGTAATTCCTTCGCCAACGCCTTCA 96986
|| || || || |||| ||||||||| || | ||| |||||||| |||| || || |
Sbjct 646 ACGGTTGAGCTGGGACAGCGCCACCACCGGGCAGTTG-AATTCCTTGGCCAGGGCTTTGA 588
Query 96987 GTGAGCGAGAAATCTCGGCAATTTCCAGCGTTCGGTTATC----TTGCAGCTCCGGGACG 97042
| || || || || |||| ||| || || ||||| || || ||| | ||||
Sbjct 587 GCGATCGGGAGATTTCGGAAATCTCGTTGGTACGGTTGTCGCCGCTGGAGC-CTGGGATC 529
Query 97043 CGCATAAGTTGCAGGTAGTCGATCATAATCATGCTCAAACCACCATTTTCTTTATAAACA 97102
|||| || ||||||||||||||||| |||| | | | || | || ||
Sbjct 528 TGCATCAGCTGCAGGTAGTCGATCATGATCAGGGCGATGTCGCCGTGCTC-------ACG 476
Query 97103 CGACGAGC--GCGGGAACGT------AGCTCTGTCGGCGTCAGGGCGCTTGAGTCATCAA 97154
| || ||| ||||| |||| | ||| | ||| | | || | |||||| |
Sbjct 475 C-ACCAGCCGGCGGGTACGTGCGCGCATCTCCGACGGGCTGATACCGGCGGTGTCATCGA 417
Query 97155 TAAAAATATTCTGCTTGTCCAACAGAAT-ACCCATTGCGCCAGAAACCCGCGCCCAATCC 97213
|||| | || | | | | ||| | ||| || |||| |||| ||||||
Sbjct 416 TAAACAACTTACGGTCATTGAGCAGGTTGACCGCCGACGTCAGA----CGCGGCCAATCG 361
Query 97214 TCGTCGTTAAGTTGCCCTGTTCGAATACGAGTCTGATCAACGCGTGCAAGAGAAGCCAGT 97273
||||| | || | || | || | ||||| || | || | || || | |||
Sbjct 360 TCGTCTTCCAGACGGCCGGCGCGCACCTTGGTCTGGTCGATACGGCCGAGCGACGACAGC 301
Query 97274 GAGCGCATCATCAGCTGGTGGCTCGGCATCTCAAGGCTAAAAACCAATACGGGCTTATCG 97333
||||| |||||| | || |||||||| || |||||| ||||| ||| |||
Sbjct 300 ATACGCATAATCAGCGATTCGCCTGGCATCTCCAGCGAGTAAACCAGTACGGCCTTGTCG 241
Query 97334 TTACGAACTGCGGCATTTTCGACGAGATTCATCGCAAACGTGGTCTTCCCCATAGATGGG 97393
| || | |||| ||||| || || ||||||||||| ||||| || ||||| |||||
Sbjct 240 CTGCGCAACACGGCGTTTTCCACCAGGTTCATCGCAAAGGTGGTTTTACCCATGGATGGA 181
Query 97394 CGGGCGGCGACAATGATGAGATCGGACGACTGAAGCCCTGCCGTCTTCTTATTGAGATCG 97453
||| ||||||| ||||| | ||||||| ||| || || || |||| | ||| |||
Sbjct 180 CGGCCGGCGACGATGATCAAGTCGGACGGCTGCAGGCCGCTGGTTTTCTCGTCGAGGTCG 121
Query 97454 GTAAATCCGGT 97464
|| | |||||
Sbjct 120 GTGTAGCCGGT 110
>seq366846
Length=1509
Score = 226 bits (250), Expect = 2e-54
Identities = 493/726 (68%), Gaps = 18/726 (2%)
Strand=Plus/Plus
Query 96748 GCCAATTGGGCCATTTCGTTGCTTTCCGATAATTACCTCGGCAATGCCCTTCATTTCGCT 96807
||||||||| || || || ||||| ||||| || | ||||||||||| || ||| |
Sbjct 250 GCCAATTGGTCCGTTCCGCTGCTTGCCGATGATGATTTCGGCAATGCCTTTGTGTTCCGT 309
Query 96808 ATCCGGGTGATAAACTTCGTCGCGATACAAAAACATGATCAGGTCTGCGTCCTGCTCAAT 96867
|| |||||||| || |||||||| |||| |||||||||| ||| || |||||||| ||
Sbjct 310 CTCGGGGTGATACACCTCGTCGCGGTACACGAACATGATCACGTCAGCATCCTGCTCGAT 369
Query 96868 TGCTCCTGATTCACGTAAATCTGAATTTACCGGTCGTTTGTCCGCACGCTGTTCAAGCGA 96927
||||| |||||||| || || || || ||||| || |||| || || ||||| || ||
Sbjct 370 CGCTCCGGATTCACGCAAGTCGGAGTTCACCGGGCGCTTGTTCGGGCGTTGTTCCAGGGA 429
Query 96928 TCGATTAAGTTGTGACAATGCCACCACC-GGTACTTGTAATTCCTTCGCCAACGCCTTCA 96986
|| || || || |||| ||||||||| || | ||| |||||||| |||| ||||| |
Sbjct 430 ACGGTTGAGCTGGGACAGCGCCACCACCGGGCAGTTG-AATTCCTTGGCCAGGGCCTTGA 488
Query 96987 GTGAGCGAGAAATCTCGGCAATTTCCAGCGTTCGGTTATC----TTGCAGCTCCGGGACG 97042
| || || || || |||| ||| || || ||||| || || ||| | || |
Sbjct 489 GCGACCGCGAGATTTCGGAAATCTCGTTGGTGCGGTTGTCACCACTGGAGC-CTGGAATC 547
Query 97043 CGCATAAGTTGCAGGTAGTCGATCATAATCATGCTCAAACCACCATTTTC-TTTATAAAC 97101
|||| || ||||||||||||||||| |||| | | | || | || || | |
Sbjct 548 TGCATCAGCTGCAGGTAGTCGATCATGATCAGGGCGATGTCGCCGTGCTCACGTACCAGC 607
Query 97102 ACGACGAGCGCGGGAACGTAGCTCTGTCGGCGTCAGGGCGCTTGAGTCATCAATAAAAAT 97161
|| || | || | ||| | ||| | || | | || | |||||| || || |
Sbjct 608 -CGGCGGGTACGTGCACGCATCTCCGATGGGCTGATACCGGCGGTGTCATCGATGAACAG 666
Query 97162 ATTCTGCTTGTCCAACAGAAT-ACCCATTGCGCCAGAAACCCGCGCCCAATCCTCGTCGT 97220
|| | | || | ||| | ||| || ||| |||| |||||| ||||| |
Sbjct 667 CTTGCGGTCGTTAAGCAGGTTGACCGCCGACGTCAG----GCGCGGCCAATCGTCGTCTT 722
Query 97221 TAAGTTGCCCTGTTCGAATACGAGTCTGATCAACGCGTGCAAGAGAAGCCAGTGAGCGCA 97280
|| | || | ||| | ||||| || | || | || || | || ||||
Sbjct 723 CCAGGCGGCCGGCTCGCACCTTGGTCTGGTCGATACGGCCGAGCGACGAGAGCATACGCA 782
Query 97281 TCATCAGCTGGTGGCTCGGCATCTCAAGGCTAAAAACCAATACGGGCTTATCGTTACGAA 97340
| |||| | | | |||||||| || |||||| ||||| || ||| | || |
Sbjct 783 TGATCAACGATTCACCTGGCATCTCCAGCGAGTAAACCAGTACGGCTTTGTCGCTGCGCA 842
Query 97341 CTGCGGCATTTTCGACGAGATTCATCGCAAACGTGGTCTTCCCCATAGATGGGCGGGCGG 97400
|||| ||||| || || ||||||||||| ||||| || ||||| ||||| ||| |||
Sbjct 843 GCACGGCGTTTTCCACCAGGTTCATCGCAAAGGTGGTTTTACCCATGGATGGACGGCCGG 902
Query 97401 CGACAATGATGAGATCGGACGACTG-AAGCC-CTGCCGTCTTCTTATTGAGATCGGTAAA 97458
| || ||||| | || |||| ||| ||||| ||| ||||||| | ||| ||||| |
Sbjct 903 CAACGATGATCAAGTCAGACGGCTGCAAGCCGCTG--GTCTTCTCGTCGAGGTCGGTGTA 960
Query 97459 TCCGGT 97464
|||||
Sbjct 961 GCCGGT 966
>seq3087968
Length=6546
Score = 161 bits (178), Expect = 6e-35
Identities = 157/202 (78%), Gaps = 0/202 (0%)
Strand=Plus/Minus
Query 102045 TTCCGGCAACTTCCTTCCCCTCGCCTCTGCTCGGCGCAATATTCCGGCGCACGCCTTCGA 102104
|||||| ||| || | ||||||||||| || ||||||| ||| |||||||| |||||||
Sbjct 202 TTCCGGTAACGTCTTGCCCCTCGCCTCGGCGCGGCGCAGTATCCCGGCGCAAGCCTTCGC 143
Query 102105 ACTCAAAAAGTACCGTTGCGGGATCGAGGTCTGTTCGAGCACTTGCGACAACAAACACGC 102164
||||||||||||| | ||||||| | |||||||||||||||||| ||||| |
Sbjct 142 GCTCAAAAAGTACCTCGGTTGGATCGAACCCGTCTCGAGCACTTGCGACAACGAACACAC 83
Query 102165 GTCGGCGTCGTTGTGCCACTCCGAAGTATTGGGCATCAAGGATTCTCCAGGCCACCTTTC 102224
| ||||||||||| |||| ||||| |||||||| || |||| | ||| || | |||
Sbjct 82 GACGGCGTCGTTGGGCCAGGCCGAAATATTGGGCGTCCAGGACCCGCCACGCGATTGTTC 23
Query 102225 GCTGCGGTCCATAAATACAACC 102246
| |||||||| | ||||||
Sbjct 22 TTTTGGGTCCATACACACAACC 1
>seq2815396
Length=244
Score = 158 bits (174), Expect = 8e-34
Identities = 175/231 (76%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 96748 GCCAATTGGGCCATTTCGTTGCTTTCCGATAATTACCTCGGCAATGCCCTTCATTTCGCT 96807
||| || || || || || ||||| ||||| || | |||||||||||| || ||| |
Sbjct 13 GCCGATCGGCCCGTTCCGCTGCTTGCCGATGATGATCTCGGCAATGCCTTTATGTTCCGT 72
Query 96808 ATCCGGGTGATAAACTTCGTCGCGATACAAAAACATGATCAGGTCTGCGTCCTGCTCAAT 96867
|| ||||| || || ||||| || |||| ||||||||||| ||| || |||||||| ||
Sbjct 73 TTCGGGGTGGTACACCTCGTCCCGGTACACAAACATGATCACGTCAGCATCCTGCTCGAT 132
Query 96868 TGCTCCTGATTCACGTAAATCTGAATTTACCGGTCGTTTGTCCGCACGCTGTTCAAGCGA 96927
||||| ||||| || | || || || ||||| || |||| | ||||||||| || ||
Sbjct 133 CGCTCCGGATTCGCGCAGGTCGGAGTTCACCGGGCGCTTGTTGGGACGCTGTTCCAGGGA 192
Query 96928 TCGATTAAGTTGTGACAATGCCACCACC-GGTACTTGTAATTCCTTCGCCA 96977
|| || || || |||| ||||||||| || | ||| |||||||| ||||
Sbjct 193 ACGGTTGAGCTGCGACAGCGCCACCACCGGGCAGTTG-AATTCCTTGGCCA 242
>seq108461
Length=6150
Score = 145 bits (160), Expect = 5e-30
Identities = 115/138 (83%), Gaps = 0/138 (0%)
Strand=Plus/Minus
Query 102045 TTCCGGCAACTTCCTTCCCCTCGCCTCTGCTCGGCGCAATATTCCGGCGCACGCCTTCGA 102104
|||||| ||| |||| ||||| ||||| || ||||||| ||| |||||||||||||||
Sbjct 322 TTCCGGTAACGTCCTGCCCCTGGCCTCGGCGCGGCGCAGTATCCCGGCGCACGCCTTCTC 263
Query 102105 ACTCAAAAAGTACCGTTGCGGGATCGAGGTCTGTTCGAGCACTTGCGACAACAAACACGC 102164
|||||||||||||| || |||||||| | |||||||||||||||||| ||||| |
Sbjct 262 GCTCAAAAAGTACCGCTGTGGGATCGAACCCGTCTCGAGCACTTGCGACAACGAACACAC 203
Query 102165 GTCGGCGTCGTTGTGCCA 102182
| ||||||||||| ||||
Sbjct 202 GACGGCGTCGTTGGGCCA 185
Score = 82.4 bits (90), Expect = 5e-11
Identities = 80/103 (78%), Gaps = 0/103 (0%)
Strand=Plus/Minus
Query 84409 CGCCCTCAGCCCTTGCATCGCATTCGCTGATATCGTTCAACCGCTCAACGCGCACGTTGG 84468
||||||| ||| | || | | |||| |||| || | ||||||||| ||||||||| ||
Sbjct 4072 CGCCCTCGGCCTTGGCCTGGTCTTCGGTGATGTCCTGCAACCGCTCGACGCGCACGGCGG 4013
Query 84469 TAATTTCCAGAAGAATGCGCGATGCCCAGCGCGGCATGTGAAT 84511
| || ||||| || ||||| | |||||||||||||| || ||
Sbjct 4012 TGATCTCCAGCAGGATGCGGCAGGCCCAGCGCGGCATATGGAT 3970
>seq2453999
Length=160
Score = 123 bits (136), Expect = 2e-23
Identities = 119/153 (78%), Gaps = 0/153 (0%)
Strand=Plus/Minus
Query 96748 GCCAATTGGGCCATTTCGTTGCTTTCCGATAATTACCTCGGCAATGCCCTTCATTTCGCT 96807
||| || || || || || ||||| ||||| || | |||||||||||| || ||| |
Sbjct 154 GCCGATCGGCCCGTTCCGCTGCTTGCCGATGATGATCTCGGCAATGCCTTTGTGCTCGGT 95
Query 96808 ATCCGGGTGATAAACTTCGTCGCGATACAAAAACATGATCAGGTCTGCGTCCTGCTCAAT 96867
|| ||||| || || |||||||| |||| ||||||||||| ||| || |||||||| ||
Sbjct 94 CTCGGGGTGGTACACCTCGTCGCGGTACACAAACATGATCACGTCAGCATCCTGCTCGAT 35
Query 96868 TGCTCCTGATTCACGTAAATCTGAATTTACCGG 96900
||||| |||||||| || || || || |||||
Sbjct 34 CGCTCCGGATTCACGCAAGTCGGAGTTCACCGG 2
>seq325747
Length=981
Score = 120 bits (132), Expect = 2e-22
Identities = 163/225 (72%), Gaps = 2/225 (1%)
Strand=Plus/Plus
Query 62488 GAAGAACTATTAGGCCAGCCTCACAACATCGTAAGACACCCAGATATGCCGCCTGCTGCA 62547
|| ||| || | ||| ||| || ||| | | | ||||| |||||||||||||| ||
Sbjct 524 GACGAATTACTTGGCTCGCCACATAACCTGTTGCGCCACCCCGATATGCCGCCTGCGGCG 583
Query 62548 TTTGAGCATATGTGGAGTACATTAAAATCTGGCCGCTCATGGATGGGGCTAGTAAAAAAT 62607
|||| ||| |||||| | || | ||| |||||| || |||||||| | || |||||
Sbjct 584 TTTGCGCACATGTGGCGGACCCTCAAAAGTGGCCGGTCCTGGATGGGCATGGTGAAAAAC 643
Query 62608 CGCTGTAAAAATGGCGACCACTATTGGGTAAGTGCTTATGTAACGCCAAT-AGCTAAGAA 62666
||||| || || ||||||||||||||||| || || |||| ||||| | | | |||
Sbjct 644 CGCTGCAAGAACGGCGACCACTATTGGGTCAGCGCCTATGCCACGCCGGTCACCCGCGAA 703
Query 62667 TGGTTCGATTGTTGAATACCAGTCTGTAAGGACCAAGCCTGAACC 62711
|| ||| || || || ||||| || | |||||||| || ||
Sbjct 704 -GGGGCGACGGTGGAGTATCAGTCAGTGCGCACCAAGCCGGACCC 747
>seq3016640
Length=777
Score = 109 bits (120), Expect = 3e-19
Identities = 137/188 (73%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 97277 CGCATCATCAGCTGGTGGCTCGGCATCTCAAGGCTAAAAACCAATACGGGCTTATCGTTA 97336
||||| |||||| | || |||||||| ||| | |||| |||| ||| ||| |
Sbjct 361 CGCATGATCAGCGATTCGCCTGGCATCTCGAGGGAGTACACCAGCACGGTCTTGTCGCTG 420
Query 97337 CGAACTGCGGCATTTTCGACGAGATTCATCGCAAACGTGGTCTTCCCCATAGATGGGCGG 97396
|| | |||| ||||| ||||| ||||||||||| ||||| || ||||| ||||| |||
Sbjct 421 CGCAACACGGCGTTTTCCACGAGGTTCATCGCAAAGGTGGTTTTACCCATGGATGGACGG 480
Query 97397 GCGGCGACAATGATGAGATCGGACGACTGAAGCCCTGCCGTCTTCTTATTGAGATCGGTA 97456
||||||| ||||| | || |||| ||| || || ||||||| | ||| |||||
Sbjct 481 CCGGCGACGATGATCAAGTCTGACGGCTGCAGGCCGCTGGTCTTCTCGTCGAGGTCGGTG 540
Query 97457 AATCCGGT 97464
| |||||
Sbjct 541 TAACCGGT 548
>seq254255
Length=1937
Score = 109 bits (120), Expect = 3e-19
Identities = 207/303 (68%), Gaps = 4/303 (1%)
Strand=Plus/Plus
Query 102481 TGCAAGCTCCACATACTTCAAAGTTAGCGCGCCGCGTTCATCATCAAGCCCACCACGTAA 102540
|||||||||||| || || | || || |||||||| || || || | || |
Sbjct 1 TGCAAGCTCCACGTATTTGATGGTGAGGGCGCCGCGCGGGTCGGTGAGGCCTTCGCGCAT 60
Query 102541 GCCCGCGATACTGAAT--GCCTGACAAGGCGTACCCCCGACGAGCACATCAGGGGATTCG 102598
|| || | ||||| ||||| || || || || ||||| |||||||| || | | |
Sbjct 61 ACCGGCAA--CTGAAAAGGCCTGGCATGGGGTGCCGCCGACCAGCACATCCGGCGCTGGG 118
Query 102599 ATTTCCCCAGCCAGGACTTTTTTGGCAAGTTTTGTCATGTCGCCAAGGTTGGCGACATGG 102658
|| | || ||||| || ||| || || ||||||||||| |||| | || | |
Sbjct 119 ATCTTGCCGGCCAGCACCAGGGCGGCCAGCTTGGTCATGTCGCCGTGGTTCGGCACGTCG 178
Query 102659 GGCCAGCGGTGCGCAAGAACGGCAGATGGAAAAGACTCGATTTCAGCAAACCACACCGGA 102718
|| || |||| || || || || || || || | ||| || || || ||||| | |
Sbjct 179 GGGTAGTGGTGGGCCAGGACCGCCGAGGGGAACGGCTCAATCTCGGCGAACCAGGCGGCG 238
Query 102719 CGCATACCCAACGGTTCCCAGGCAATACTCGCGGCTTCAATTCCACTGCAAACAGATCCA 102778
||||| |||| ||| | |||||| ||||||||||||| || ||||| ||||| ||
Sbjct 239 CGCATGCCCAGCGGGTGCCAGGCTTGTGTCGCGGCTTCAATGCCGCTGCACACAGAGCCG 298
Query 102779 TAG 102781
|||
Sbjct 299 TAG 301
>seq268701
Length=8118
Score = 95.1 bits (104), Expect = 8e-15
Identities = 151/216 (70%), Gaps = 3/216 (1%)
Strand=Plus/Plus
Query 44707 CGCCGATCATTTGCATGGTGCCGCCCTGGCTGACGATAATTTCCGTCGTGTAACGTTCTA 44766
|||||| || |||||||||||| | | ||| | ||||| || |||||||| | |
Sbjct 7906 CGCCGAGCAGTTGCATGGTGCCTTGCATGTCGACCACGATTTCGGTGGTGTAACGCTTGA 7965
Query 44767 CACCGGCGTCATCTGTCCACTTACGGGTTTTAAGTTTCCCTTCGATGTAGACCTGAGAAC 44826
| |||| | | ||||| ||||||| ||||| ||||| ||||| ||||| ||||
Sbjct 7966 ---TGCCGTCTTTTTCCCACTCGCGGGTTTGCAGTTTGCCTTCAATGTAAACCTGCGAAC 8022
Query 44827 CTTTTCGTAAATACTCACTCGCAATTTCAGCAAGTTTTCCGAACAAAACGACTTTATGCC 44886
|||| || | || |||| || ||||| || | || ||||||| || ||||
Sbjct 8023 CTTTGCGCAGGTATTCACCGGCGATTTCTGCCACCTTGCCGAACATCGACACACGGTGCC 8082
Query 44887 ATTCTGTTTGCTCTTTCTGTTGGCCCGTTTGCTTGT 44922
|||| |||| ||| || ||||| || |||||||
Sbjct 8083 ATTCGGTTTTCTCGACCTTCTGGCCAGTCTGCTTGT 8118
>seq3085141
Length=3208
Score = 91.5 bits (100), Expect = 9e-14
Identities = 116/160 (73%), Gaps = 0/160 (0%)
Strand=Plus/Plus
Query 102622 GGCAAGTTTTGTCATGTCGCCAAGGTTGGCGACATGGGGCCAGCGGTGCGCAAGAACGGC 102681
||| || || ||||||||||| |||| | || | ||| || |||| || || || ||
Sbjct 10 GGCCAGCTTGGTCATGTCGCCGTGGTTCGGCACGTCGGGGTAGTGGTGGGCCAGCACCGC 69
Query 102682 AGATGGAAAAGACTCGATTTCAGCAAACCACACCGGACGCATACCCAACGGTTCCCAGGC 102741
|| || || | ||| || ||||| ||||| | | ||||| |||||||| | ||||||
Sbjct 70 CGAGGGGAACGGCTCAATCTCAGCGAACCAGGCGGCGCGCATGCCCAACGGGTGCCAGGC 129
Query 102742 AATACTCGCGGCTTCAATTCCACTGCAAACAGATCCATAG 102781
|||||||||| || ||| ||||||||| || |||
Sbjct 130 CTGTGTCGCGGCTTCGATGCCAGAGCAAACAGAACCGTAG 169
>seq2262318
Length=133
Score = 91.5 bits (100), Expect = 9e-14
Identities = 101/132 (77%), Gaps = 2/132 (2%)
Strand=Plus/Minus
Query 96847 CAGGTCTGCGTCCTGCTCAATTGCTCCTGATTCACGTAAATCTGAATTTACCGGTCGTTT 96906
|| ||| || |||||||| || ||||| |||||||| || || || || ||||| || ||
Sbjct 133 CACGTCAGCATCCTGCTCGATCGCTCCGGATTCACGCAAGTCGGAGTTCACCGGGCGCTT 74
Query 96907 GTCCGCACGCTGTTCAAGCGATCGATTAAGTTGTGACAATGCCACCACC-GGTACTTGTA 96965
|| | ||| ||||| || || || || || || |||| ||||||||| || | ||| |
Sbjct 73 GTTGGGACGTTGTTCCAGGGAACGGTTGAGCTGCGACAGCGCCACCACCGGGCAGTTG-A 15
Query 96966 ATTCCTTCGCCA 96977
||||||| ||||
Sbjct 14 ATTCCTTGGCCA 3
>seq2951953
Length=451
Score = 89.7 bits (98), Expect = 3e-13
Identities = 151/218 (69%), Gaps = 3/218 (1%)
Strand=Plus/Plus
Query 44707 CGCCGATCATTTGCATGGTGCCGCCCTGGCTGACGATAATTTCCGTCGTGTAACGTTCTA 44766
|||| | || |||||||| || | | ||| | ||||| || |||||||| | |
Sbjct 186 CGCCCAGCAACTGCATGGTTCCTTGCATGTCGACTACGATTTCAGTGGTGTAACGCTTGA 245
Query 44767 CACCGGCGTCATCTGTCCACTTACGGGTTTTAAGTTTCCCTTCGATGTAGACCTGAGAAC 44826
||| | | || ||||| ||||||| || || ||||||||||||||||| ||||
Sbjct 246 TGCCGTCTTTTTC---CCACTCGCGGGTTTGCAGCTTGCCTTCGATGTAGACCTGCGAAC 302
Query 44827 CTTTTCGTAAATACTCACTCGCAATTTCAGCAAGTTTTCCGAACAAAACGACTTTATGCC 44886
|||| || | ||||||| || || || |||| || |||||||| || ||||
Sbjct 303 CTTTGCGCAGGTACTCACCAGCGATCTCTGCAACCTTGCCGAACAACGACACGCGGTGCC 362
Query 44887 ATTCTGTTTGCTCTTTCTGTTGGCCCGTTTGCTTGTCG 44924
| || |||| |||||| | | | || |||||||||
Sbjct 363 ACTCGGTTTTCTCTTTGCGCTCGTTGGTCTGCTTGTCG 400
>seq2799564
Length=235
Score = 84.2 bits (92), Expect = 1e-11
Identities = 103/141 (73%), Gaps = 0/141 (0%)
Strand=Plus/Minus
Query 44783 CCACTTACGGGTTTTAAGTTTCCCTTCGATGTAGACCTGAGAACCTTTTCGTAAATACTC 44842
||||| ||||||| ||||| ||||||||||| ||||| |||||||| || | |||||
Sbjct 205 CCACTCGCGGGTTTGCAGTTTGCCTTCGATGTAAACCTGCGAACCTTTGCGCAGGTACTC 146
Query 44843 ACTCGCAATTTCAGCAAGTTTTCCGAACAAAACGACTTTATGCCATTCTGTTTGCTCTTT 44902
| || || || |||| || ||||||| || |||||||| |||| |||
Sbjct 145 GCCGGCGATCTCTGCAACCTTGCCGAACATCGACACGCGGTGCCATTCGGTTTTCTCGAC 86
Query 44903 CTGTTGGCCCGTTTGCTTGTC 44923
|| ||||| || ||||||||
Sbjct 85 CTTCTGGCCGGTCTGCTTGTC 65
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 318443747829826
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |