Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09] 3,088,511 sequences; 2,785,377,831 total letters Query= NC_031129.1 Length=103445 Score E Sequences producing significant alignments: (Bits) Value seq3047186 233 1e-56 seq3023355 226 2e-54 seq366846 226 2e-54 seq3087968 161 6e-35 seq2815396 158 8e-34 seq108461 145 5e-30 seq2453999 123 2e-23 seq325747 120 2e-22 seq3016640 109 3e-19 seq254255 109 3e-19 seq268701 95.1 8e-15 seq3085141 91.5 9e-14 seq2262318 91.5 9e-14 seq2951953 89.7 3e-13 seq2799564 84.2 1e-11 >seq3047186 Length=1103 Score = 233 bits (258), Expect = 1e-56 Identities = 488/723 (67%), Gaps = 12/723 (2%) Strand=Plus/Minus Query 96748 GCCAATTGGGCCATTTCGTTGCTTTCCGATAATTACCTCGGCAATGCCCTTCATTTCGCT 96807 ||| || || || || || ||||| ||||| || | ||||||||||||||| ||| | Sbjct 946 GCCGATAGGCCCGTTCCGCTGCTTGCCGATGATGATCTCGGCAATGCCCTTGTGTTCCGT 887 Query 96808 ATCCGGGTGATAAACTTCGTCGCGATACAAAAACATGATCAGGTCTGCGTCCTGCTCAAT 96867 || |||||||| || |||||||| |||| |||||||||| ||| ||||||||||| || Sbjct 886 TTCGGGGTGATACACCTCGTCGCGGTACACGAACATGATCACGTCGGCGTCCTGCTCGAT 827 Query 96868 TGCTCCTGATTCACGTAAATCTGAATTTACCGGTCGTTTGTCCGCACGCTGTTCAAGCGA 96927 ||||| |||||||| || || || || ||||| || |||| | || ||||| || || Sbjct 826 CGCTCCGGATTCACGCAAGTCGGAGTTCACCGGGCGCTTGTTGGGGCGTTGTTCCAGGGA 767 Query 96928 TCGATTAAGTTGTGACAATGCCACCACC-GGTACTTGTAATTCCTTCGCCAACGCCTTCA 96986 || || || || |||| ||||||||| || | ||| |||||||| |||| || |||| Sbjct 766 GCGGTTGAGCTGGGACAGCGCCACCACCGGGCAGTTG-AATTCCTTGGCCAGGGCTTTCA 708 Query 96987 GTGAGCGAGAAATCTCGGCAATTTCCAGCGTTCGGTTATCTTGCAGCT-----CCGGGAC 97041 | || || || || |||| ||| || || ||||| || || ||| |||||| Sbjct 707 GGGAACGGGAGATTTCGGAAATCTCGTTGGTGCGGTTGTC--GCCGCTGGAACCCGGGAT 650 Query 97042 GCGCATAAGTTGCAGGTAGTCGATCATAATCATGCTCAAACCACCATTTTCTTTATAAAC 97101 |||| | ||||||||||||||||| |||| | | | || | ||| | Sbjct 649 CTGCATCAACTGCAGGTAGTCGATCATGATCAGGGCGATGTCGCCGTGTTCACGCACCAG 590 Query 97102 ACGACGAGCGCGGGAACGTAGCTCTGTCGGCGTCAGGGCGCTTGAGTCATCAATAAAAAT 97161 || || | || | ||| | ||||| || | | || | |||||| || || | Sbjct 589 GCGGCGGGTACGCGCACGCATCTCTGAAGGGCTGATACCGGCGGTGTCATCGATGAACAG 530 Query 97162 ATTCTGCTTGTCCAACAGAATACCCATTGCGCCAGAAACCCGCGCCCAATCCTCGTCGTT 97221 || | | || | ||| | || || | | || | ||| || ||||| | Sbjct 529 CTTGCGGTCGTTAAGCAGGTTGACC---GCCGAGGTCAGGCGTGGCCAGTCGTCGTCCTC 473 Query 97222 AAGTTGCCCTGTTCGAATACGAGTCTGATCAACGCGTGCAAGAGAAGCCAGTGAGCGCAT 97281 | ||| || | || | ||||| || | || | || || | || ||||| Sbjct 472 CAATTGGCCGGAACGCACCTTGGTCTGGTCGATACGACCCAGGGACGAGAGCATACGCAT 413 Query 97282 CATCAGCTGGTGGCTCGGCATCTCAAGGCTAAAAACCAATACGGGCTTATCGTTACGAAC 97341 |||||| | | |||||||| ||| | |||| || | ||| ||| | || | Sbjct 412 GATCAGCGATTCACCTGGCATCTCGAGGGAGTACACCAGCACCGCCTTGTCGCTGCGCAG 353 Query 97342 TGCGGCATTTTCGACGAGATTCATCGCAAACGTGGTCTTCCCCATAGATGGGCGGGCGGC 97401 | |||| || || || || ||||| || || |||||||| ||||| || || ||| |||| Sbjct 352 TACGGCGTTCTCCACCAGGTTCATGGCGAAGGTGGTCTTACCCATCGAAGGACGGCCGGC 293 Query 97402 GACAATGATGAGATCGGACGACTGAAGCCCTGCCGTCTTCTTATTGAGATCGGTAAATCC 97461 ||| ||||| || ||||||| ||| || || ||||||| || ||| |||||| | || Sbjct 292 GACGATGATCAGGTCGGACGGCTGCAGGCCGCTGGTCTTCTCATCGAGGTCGGTATAGCC 233 Query 97462 GGT 97464 ||| Sbjct 232 GGT 230 >seq3023355 Length=832 Score = 226 bits (250), Expect = 2e-54 Identities = 493/731 (67%), Gaps = 28/731 (4%) Strand=Plus/Minus Query 96748 GCCAATTGGGCCATTTCGTTGCTTTCCGATAATTACCTCGGCAATGCCCTTCATTTCGCT 96807 ||| || || || || || ||||| ||||| || | |||||||||||| || || | Sbjct 826 GCCGATCGGCCCGTTCCGCTGCTTGCCGATGATGATCTCGGCAATGCCTTTGTGCTCCGT 767 Query 96808 ATCCGGGTGATAAACTTCGTCGCGATACAAAAACATGATCAGGTCTGCGTCCTGCTCAAT 96867 || |||||||| || |||||||| |||| |||||||||| ||| || |||||||| || Sbjct 766 CTCGGGGTGATACACCTCGTCGCGGTACACGAACATGATCACGTCGGCATCCTGCTCGAT 707 Query 96868 TGCTCCTGATTCACGTAAATCTGAATTTACCGGTCGTTTGTCCGCACGCTGTTCAAGCGA 96927 ||||| ||||| || || || || || ||||| || |||| || || || || || || Sbjct 706 CGCTCCGGATTCCCGCAAGTCGGAGTTCACCGGGCGCTTGTTCGGCCGTTGCTCCAGGGA 647 Query 96928 TCGATTAAGTTGTGACAATGCCACCACC-GGTACTTGTAATTCCTTCGCCAACGCCTTCA 96986 || || || || |||| ||||||||| || | ||| |||||||| |||| || || | Sbjct 646 ACGGTTGAGCTGGGACAGCGCCACCACCGGGCAGTTG-AATTCCTTGGCCAGGGCTTTGA 588 Query 96987 GTGAGCGAGAAATCTCGGCAATTTCCAGCGTTCGGTTATC----TTGCAGCTCCGGGACG 97042 | || || || || |||| ||| || || ||||| || || ||| | |||| Sbjct 587 GCGATCGGGAGATTTCGGAAATCTCGTTGGTACGGTTGTCGCCGCTGGAGC-CTGGGATC 529 Query 97043 CGCATAAGTTGCAGGTAGTCGATCATAATCATGCTCAAACCACCATTTTCTTTATAAACA 97102 |||| || ||||||||||||||||| |||| | | | || | || || Sbjct 528 TGCATCAGCTGCAGGTAGTCGATCATGATCAGGGCGATGTCGCCGTGCTC-------ACG 476 Query 97103 CGACGAGC--GCGGGAACGT------AGCTCTGTCGGCGTCAGGGCGCTTGAGTCATCAA 97154 | || ||| ||||| |||| | ||| | ||| | | || | |||||| | Sbjct 475 C-ACCAGCCGGCGGGTACGTGCGCGCATCTCCGACGGGCTGATACCGGCGGTGTCATCGA 417 Query 97155 TAAAAATATTCTGCTTGTCCAACAGAAT-ACCCATTGCGCCAGAAACCCGCGCCCAATCC 97213 |||| | || | | | | ||| | ||| || |||| |||| |||||| Sbjct 416 TAAACAACTTACGGTCATTGAGCAGGTTGACCGCCGACGTCAGA----CGCGGCCAATCG 361 Query 97214 TCGTCGTTAAGTTGCCCTGTTCGAATACGAGTCTGATCAACGCGTGCAAGAGAAGCCAGT 97273 ||||| | || | || | || | ||||| || | || | || || | ||| Sbjct 360 TCGTCTTCCAGACGGCCGGCGCGCACCTTGGTCTGGTCGATACGGCCGAGCGACGACAGC 301 Query 97274 GAGCGCATCATCAGCTGGTGGCTCGGCATCTCAAGGCTAAAAACCAATACGGGCTTATCG 97333 ||||| |||||| | || |||||||| || |||||| ||||| ||| ||| Sbjct 300 ATACGCATAATCAGCGATTCGCCTGGCATCTCCAGCGAGTAAACCAGTACGGCCTTGTCG 241 Query 97334 TTACGAACTGCGGCATTTTCGACGAGATTCATCGCAAACGTGGTCTTCCCCATAGATGGG 97393 | || | |||| ||||| || || ||||||||||| ||||| || ||||| ||||| Sbjct 240 CTGCGCAACACGGCGTTTTCCACCAGGTTCATCGCAAAGGTGGTTTTACCCATGGATGGA 181 Query 97394 CGGGCGGCGACAATGATGAGATCGGACGACTGAAGCCCTGCCGTCTTCTTATTGAGATCG 97453 ||| ||||||| ||||| | ||||||| ||| || || || |||| | ||| ||| Sbjct 180 CGGCCGGCGACGATGATCAAGTCGGACGGCTGCAGGCCGCTGGTTTTCTCGTCGAGGTCG 121 Query 97454 GTAAATCCGGT 97464 || | ||||| Sbjct 120 GTGTAGCCGGT 110 >seq366846 Length=1509 Score = 226 bits (250), Expect = 2e-54 Identities = 493/726 (68%), Gaps = 18/726 (2%) Strand=Plus/Plus Query 96748 GCCAATTGGGCCATTTCGTTGCTTTCCGATAATTACCTCGGCAATGCCCTTCATTTCGCT 96807 ||||||||| || || || ||||| ||||| || | ||||||||||| || ||| | Sbjct 250 GCCAATTGGTCCGTTCCGCTGCTTGCCGATGATGATTTCGGCAATGCCTTTGTGTTCCGT 309 Query 96808 ATCCGGGTGATAAACTTCGTCGCGATACAAAAACATGATCAGGTCTGCGTCCTGCTCAAT 96867 || |||||||| || |||||||| |||| |||||||||| ||| || |||||||| || Sbjct 310 CTCGGGGTGATACACCTCGTCGCGGTACACGAACATGATCACGTCAGCATCCTGCTCGAT 369 Query 96868 TGCTCCTGATTCACGTAAATCTGAATTTACCGGTCGTTTGTCCGCACGCTGTTCAAGCGA 96927 ||||| |||||||| || || || || ||||| || |||| || || ||||| || || Sbjct 370 CGCTCCGGATTCACGCAAGTCGGAGTTCACCGGGCGCTTGTTCGGGCGTTGTTCCAGGGA 429 Query 96928 TCGATTAAGTTGTGACAATGCCACCACC-GGTACTTGTAATTCCTTCGCCAACGCCTTCA 96986 || || || || |||| ||||||||| || | ||| |||||||| |||| ||||| | Sbjct 430 ACGGTTGAGCTGGGACAGCGCCACCACCGGGCAGTTG-AATTCCTTGGCCAGGGCCTTGA 488 Query 96987 GTGAGCGAGAAATCTCGGCAATTTCCAGCGTTCGGTTATC----TTGCAGCTCCGGGACG 97042 | || || || || |||| ||| || || ||||| || || ||| | || | Sbjct 489 GCGACCGCGAGATTTCGGAAATCTCGTTGGTGCGGTTGTCACCACTGGAGC-CTGGAATC 547 Query 97043 CGCATAAGTTGCAGGTAGTCGATCATAATCATGCTCAAACCACCATTTTC-TTTATAAAC 97101 |||| || ||||||||||||||||| |||| | | | || | || || | | Sbjct 548 TGCATCAGCTGCAGGTAGTCGATCATGATCAGGGCGATGTCGCCGTGCTCACGTACCAGC 607 Query 97102 ACGACGAGCGCGGGAACGTAGCTCTGTCGGCGTCAGGGCGCTTGAGTCATCAATAAAAAT 97161 || || | || | ||| | ||| | || | | || | |||||| || || | Sbjct 608 -CGGCGGGTACGTGCACGCATCTCCGATGGGCTGATACCGGCGGTGTCATCGATGAACAG 666 Query 97162 ATTCTGCTTGTCCAACAGAAT-ACCCATTGCGCCAGAAACCCGCGCCCAATCCTCGTCGT 97220 || | | || | ||| | ||| || ||| |||| |||||| ||||| | Sbjct 667 CTTGCGGTCGTTAAGCAGGTTGACCGCCGACGTCAG----GCGCGGCCAATCGTCGTCTT 722 Query 97221 TAAGTTGCCCTGTTCGAATACGAGTCTGATCAACGCGTGCAAGAGAAGCCAGTGAGCGCA 97280 || | || | ||| | ||||| || | || | || || | || |||| Sbjct 723 CCAGGCGGCCGGCTCGCACCTTGGTCTGGTCGATACGGCCGAGCGACGAGAGCATACGCA 782 Query 97281 TCATCAGCTGGTGGCTCGGCATCTCAAGGCTAAAAACCAATACGGGCTTATCGTTACGAA 97340 | |||| | | | |||||||| || |||||| ||||| || ||| | || | Sbjct 783 TGATCAACGATTCACCTGGCATCTCCAGCGAGTAAACCAGTACGGCTTTGTCGCTGCGCA 842 Query 97341 CTGCGGCATTTTCGACGAGATTCATCGCAAACGTGGTCTTCCCCATAGATGGGCGGGCGG 97400 |||| ||||| || || ||||||||||| ||||| || ||||| ||||| ||| ||| Sbjct 843 GCACGGCGTTTTCCACCAGGTTCATCGCAAAGGTGGTTTTACCCATGGATGGACGGCCGG 902 Query 97401 CGACAATGATGAGATCGGACGACTG-AAGCC-CTGCCGTCTTCTTATTGAGATCGGTAAA 97458 | || ||||| | || |||| ||| ||||| ||| ||||||| | ||| ||||| | Sbjct 903 CAACGATGATCAAGTCAGACGGCTGCAAGCCGCTG--GTCTTCTCGTCGAGGTCGGTGTA 960 Query 97459 TCCGGT 97464 ||||| Sbjct 961 GCCGGT 966 >seq3087968 Length=6546 Score = 161 bits (178), Expect = 6e-35 Identities = 157/202 (78%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 102045 TTCCGGCAACTTCCTTCCCCTCGCCTCTGCTCGGCGCAATATTCCGGCGCACGCCTTCGA 102104 |||||| ||| || | ||||||||||| || ||||||| ||| |||||||| ||||||| Sbjct 202 TTCCGGTAACGTCTTGCCCCTCGCCTCGGCGCGGCGCAGTATCCCGGCGCAAGCCTTCGC 143 Query 102105 ACTCAAAAAGTACCGTTGCGGGATCGAGGTCTGTTCGAGCACTTGCGACAACAAACACGC 102164 ||||||||||||| | ||||||| | |||||||||||||||||| ||||| | Sbjct 142 GCTCAAAAAGTACCTCGGTTGGATCGAACCCGTCTCGAGCACTTGCGACAACGAACACAC 83 Query 102165 GTCGGCGTCGTTGTGCCACTCCGAAGTATTGGGCATCAAGGATTCTCCAGGCCACCTTTC 102224 | ||||||||||| |||| ||||| |||||||| || |||| | ||| || | ||| Sbjct 82 GACGGCGTCGTTGGGCCAGGCCGAAATATTGGGCGTCCAGGACCCGCCACGCGATTGTTC 23 Query 102225 GCTGCGGTCCATAAATACAACC 102246 | |||||||| | |||||| Sbjct 22 TTTTGGGTCCATACACACAACC 1 >seq2815396 Length=244 Score = 158 bits (174), Expect = 8e-34 Identities = 175/231 (76%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 96748 GCCAATTGGGCCATTTCGTTGCTTTCCGATAATTACCTCGGCAATGCCCTTCATTTCGCT 96807 ||| || || || || || ||||| ||||| || | |||||||||||| || ||| | Sbjct 13 GCCGATCGGCCCGTTCCGCTGCTTGCCGATGATGATCTCGGCAATGCCTTTATGTTCCGT 72 Query 96808 ATCCGGGTGATAAACTTCGTCGCGATACAAAAACATGATCAGGTCTGCGTCCTGCTCAAT 96867 || ||||| || || ||||| || |||| ||||||||||| ||| || |||||||| || Sbjct 73 TTCGGGGTGGTACACCTCGTCCCGGTACACAAACATGATCACGTCAGCATCCTGCTCGAT 132 Query 96868 TGCTCCTGATTCACGTAAATCTGAATTTACCGGTCGTTTGTCCGCACGCTGTTCAAGCGA 96927 ||||| ||||| || | || || || ||||| || |||| | ||||||||| || || Sbjct 133 CGCTCCGGATTCGCGCAGGTCGGAGTTCACCGGGCGCTTGTTGGGACGCTGTTCCAGGGA 192 Query 96928 TCGATTAAGTTGTGACAATGCCACCACC-GGTACTTGTAATTCCTTCGCCA 96977 || || || || |||| ||||||||| || | ||| |||||||| |||| Sbjct 193 ACGGTTGAGCTGCGACAGCGCCACCACCGGGCAGTTG-AATTCCTTGGCCA 242 >seq108461 Length=6150 Score = 145 bits (160), Expect = 5e-30 Identities = 115/138 (83%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 102045 TTCCGGCAACTTCCTTCCCCTCGCCTCTGCTCGGCGCAATATTCCGGCGCACGCCTTCGA 102104 |||||| ||| |||| ||||| ||||| || ||||||| ||| ||||||||||||||| Sbjct 322 TTCCGGTAACGTCCTGCCCCTGGCCTCGGCGCGGCGCAGTATCCCGGCGCACGCCTTCTC 263 Query 102105 ACTCAAAAAGTACCGTTGCGGGATCGAGGTCTGTTCGAGCACTTGCGACAACAAACACGC 102164 |||||||||||||| || |||||||| | |||||||||||||||||| ||||| | Sbjct 262 GCTCAAAAAGTACCGCTGTGGGATCGAACCCGTCTCGAGCACTTGCGACAACGAACACAC 203 Query 102165 GTCGGCGTCGTTGTGCCA 102182 | ||||||||||| |||| Sbjct 202 GACGGCGTCGTTGGGCCA 185 Score = 82.4 bits (90), Expect = 5e-11 Identities = 80/103 (78%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 84409 CGCCCTCAGCCCTTGCATCGCATTCGCTGATATCGTTCAACCGCTCAACGCGCACGTTGG 84468 ||||||| ||| | || | | |||| |||| || | ||||||||| ||||||||| || Sbjct 4072 CGCCCTCGGCCTTGGCCTGGTCTTCGGTGATGTCCTGCAACCGCTCGACGCGCACGGCGG 4013 Query 84469 TAATTTCCAGAAGAATGCGCGATGCCCAGCGCGGCATGTGAAT 84511 | || ||||| || ||||| | |||||||||||||| || || Sbjct 4012 TGATCTCCAGCAGGATGCGGCAGGCCCAGCGCGGCATATGGAT 3970 >seq2453999 Length=160 Score = 123 bits (136), Expect = 2e-23 Identities = 119/153 (78%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 96748 GCCAATTGGGCCATTTCGTTGCTTTCCGATAATTACCTCGGCAATGCCCTTCATTTCGCT 96807 ||| || || || || || ||||| ||||| || | |||||||||||| || ||| | Sbjct 154 GCCGATCGGCCCGTTCCGCTGCTTGCCGATGATGATCTCGGCAATGCCTTTGTGCTCGGT 95 Query 96808 ATCCGGGTGATAAACTTCGTCGCGATACAAAAACATGATCAGGTCTGCGTCCTGCTCAAT 96867 || ||||| || || |||||||| |||| ||||||||||| ||| || |||||||| || Sbjct 94 CTCGGGGTGGTACACCTCGTCGCGGTACACAAACATGATCACGTCAGCATCCTGCTCGAT 35 Query 96868 TGCTCCTGATTCACGTAAATCTGAATTTACCGG 96900 ||||| |||||||| || || || || ||||| Sbjct 34 CGCTCCGGATTCACGCAAGTCGGAGTTCACCGG 2 >seq325747 Length=981 Score = 120 bits (132), Expect = 2e-22 Identities = 163/225 (72%), Gaps = 2/225 (1%) Strand=Plus/Plus Query 62488 GAAGAACTATTAGGCCAGCCTCACAACATCGTAAGACACCCAGATATGCCGCCTGCTGCA 62547 || ||| || | ||| ||| || ||| | | | ||||| |||||||||||||| || Sbjct 524 GACGAATTACTTGGCTCGCCACATAACCTGTTGCGCCACCCCGATATGCCGCCTGCGGCG 583 Query 62548 TTTGAGCATATGTGGAGTACATTAAAATCTGGCCGCTCATGGATGGGGCTAGTAAAAAAT 62607 |||| ||| |||||| | || | ||| |||||| || |||||||| | || ||||| Sbjct 584 TTTGCGCACATGTGGCGGACCCTCAAAAGTGGCCGGTCCTGGATGGGCATGGTGAAAAAC 643 Query 62608 CGCTGTAAAAATGGCGACCACTATTGGGTAAGTGCTTATGTAACGCCAAT-AGCTAAGAA 62666 ||||| || || ||||||||||||||||| || || |||| ||||| | | | ||| Sbjct 644 CGCTGCAAGAACGGCGACCACTATTGGGTCAGCGCCTATGCCACGCCGGTCACCCGCGAA 703 Query 62667 TGGTTCGATTGTTGAATACCAGTCTGTAAGGACCAAGCCTGAACC 62711 || ||| || || || ||||| || | |||||||| || || Sbjct 704 -GGGGCGACGGTGGAGTATCAGTCAGTGCGCACCAAGCCGGACCC 747 >seq3016640 Length=777 Score = 109 bits (120), Expect = 3e-19 Identities = 137/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 97277 CGCATCATCAGCTGGTGGCTCGGCATCTCAAGGCTAAAAACCAATACGGGCTTATCGTTA 97336 ||||| |||||| | || |||||||| ||| | |||| |||| ||| ||| | Sbjct 361 CGCATGATCAGCGATTCGCCTGGCATCTCGAGGGAGTACACCAGCACGGTCTTGTCGCTG 420 Query 97337 CGAACTGCGGCATTTTCGACGAGATTCATCGCAAACGTGGTCTTCCCCATAGATGGGCGG 97396 || | |||| ||||| ||||| ||||||||||| ||||| || ||||| ||||| ||| Sbjct 421 CGCAACACGGCGTTTTCCACGAGGTTCATCGCAAAGGTGGTTTTACCCATGGATGGACGG 480 Query 97397 GCGGCGACAATGATGAGATCGGACGACTGAAGCCCTGCCGTCTTCTTATTGAGATCGGTA 97456 ||||||| ||||| | || |||| ||| || || ||||||| | ||| ||||| Sbjct 481 CCGGCGACGATGATCAAGTCTGACGGCTGCAGGCCGCTGGTCTTCTCGTCGAGGTCGGTG 540 Query 97457 AATCCGGT 97464 | ||||| Sbjct 541 TAACCGGT 548 >seq254255 Length=1937 Score = 109 bits (120), Expect = 3e-19 Identities = 207/303 (68%), Gaps = 4/303 (1%) Strand=Plus/Plus Query 102481 TGCAAGCTCCACATACTTCAAAGTTAGCGCGCCGCGTTCATCATCAAGCCCACCACGTAA 102540 |||||||||||| || || | || || |||||||| || || || | || | Sbjct 1 TGCAAGCTCCACGTATTTGATGGTGAGGGCGCCGCGCGGGTCGGTGAGGCCTTCGCGCAT 60 Query 102541 GCCCGCGATACTGAAT--GCCTGACAAGGCGTACCCCCGACGAGCACATCAGGGGATTCG 102598 || || | ||||| ||||| || || || || ||||| |||||||| || | | | Sbjct 61 ACCGGCAA--CTGAAAAGGCCTGGCATGGGGTGCCGCCGACCAGCACATCCGGCGCTGGG 118 Query 102599 ATTTCCCCAGCCAGGACTTTTTTGGCAAGTTTTGTCATGTCGCCAAGGTTGGCGACATGG 102658 || | || ||||| || ||| || || ||||||||||| |||| | || | | Sbjct 119 ATCTTGCCGGCCAGCACCAGGGCGGCCAGCTTGGTCATGTCGCCGTGGTTCGGCACGTCG 178 Query 102659 GGCCAGCGGTGCGCAAGAACGGCAGATGGAAAAGACTCGATTTCAGCAAACCACACCGGA 102718 || || |||| || || || || || || || | ||| || || || ||||| | | Sbjct 179 GGGTAGTGGTGGGCCAGGACCGCCGAGGGGAACGGCTCAATCTCGGCGAACCAGGCGGCG 238 Query 102719 CGCATACCCAACGGTTCCCAGGCAATACTCGCGGCTTCAATTCCACTGCAAACAGATCCA 102778 ||||| |||| ||| | |||||| ||||||||||||| || ||||| ||||| || Sbjct 239 CGCATGCCCAGCGGGTGCCAGGCTTGTGTCGCGGCTTCAATGCCGCTGCACACAGAGCCG 298 Query 102779 TAG 102781 ||| Sbjct 299 TAG 301 >seq268701 Length=8118 Score = 95.1 bits (104), Expect = 8e-15 Identities = 151/216 (70%), Gaps = 3/216 (1%) Strand=Plus/Plus Query 44707 CGCCGATCATTTGCATGGTGCCGCCCTGGCTGACGATAATTTCCGTCGTGTAACGTTCTA 44766 |||||| || |||||||||||| | | ||| | ||||| || |||||||| | | Sbjct 7906 CGCCGAGCAGTTGCATGGTGCCTTGCATGTCGACCACGATTTCGGTGGTGTAACGCTTGA 7965 Query 44767 CACCGGCGTCATCTGTCCACTTACGGGTTTTAAGTTTCCCTTCGATGTAGACCTGAGAAC 44826 | |||| | | ||||| ||||||| ||||| ||||| ||||| ||||| |||| Sbjct 7966 ---TGCCGTCTTTTTCCCACTCGCGGGTTTGCAGTTTGCCTTCAATGTAAACCTGCGAAC 8022 Query 44827 CTTTTCGTAAATACTCACTCGCAATTTCAGCAAGTTTTCCGAACAAAACGACTTTATGCC 44886 |||| || | || |||| || ||||| || | || ||||||| || |||| Sbjct 8023 CTTTGCGCAGGTATTCACCGGCGATTTCTGCCACCTTGCCGAACATCGACACACGGTGCC 8082 Query 44887 ATTCTGTTTGCTCTTTCTGTTGGCCCGTTTGCTTGT 44922 |||| |||| ||| || ||||| || ||||||| Sbjct 8083 ATTCGGTTTTCTCGACCTTCTGGCCAGTCTGCTTGT 8118 >seq3085141 Length=3208 Score = 91.5 bits (100), Expect = 9e-14 Identities = 116/160 (73%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 102622 GGCAAGTTTTGTCATGTCGCCAAGGTTGGCGACATGGGGCCAGCGGTGCGCAAGAACGGC 102681 ||| || || ||||||||||| |||| | || | ||| || |||| || || || || Sbjct 10 GGCCAGCTTGGTCATGTCGCCGTGGTTCGGCACGTCGGGGTAGTGGTGGGCCAGCACCGC 69 Query 102682 AGATGGAAAAGACTCGATTTCAGCAAACCACACCGGACGCATACCCAACGGTTCCCAGGC 102741 || || || | ||| || ||||| ||||| | | ||||| |||||||| | |||||| Sbjct 70 CGAGGGGAACGGCTCAATCTCAGCGAACCAGGCGGCGCGCATGCCCAACGGGTGCCAGGC 129 Query 102742 AATACTCGCGGCTTCAATTCCACTGCAAACAGATCCATAG 102781 |||||||||| || ||| ||||||||| || ||| Sbjct 130 CTGTGTCGCGGCTTCGATGCCAGAGCAAACAGAACCGTAG 169 >seq2262318 Length=133 Score = 91.5 bits (100), Expect = 9e-14 Identities = 101/132 (77%), Gaps = 2/132 (2%) Strand=Plus/Minus Query 96847 CAGGTCTGCGTCCTGCTCAATTGCTCCTGATTCACGTAAATCTGAATTTACCGGTCGTTT 96906 || ||| || |||||||| || ||||| |||||||| || || || || ||||| || || Sbjct 133 CACGTCAGCATCCTGCTCGATCGCTCCGGATTCACGCAAGTCGGAGTTCACCGGGCGCTT 74 Query 96907 GTCCGCACGCTGTTCAAGCGATCGATTAAGTTGTGACAATGCCACCACC-GGTACTTGTA 96965 || | ||| ||||| || || || || || || |||| ||||||||| || | ||| | Sbjct 73 GTTGGGACGTTGTTCCAGGGAACGGTTGAGCTGCGACAGCGCCACCACCGGGCAGTTG-A 15 Query 96966 ATTCCTTCGCCA 96977 ||||||| |||| Sbjct 14 ATTCCTTGGCCA 3 >seq2951953 Length=451 Score = 89.7 bits (98), Expect = 3e-13 Identities = 151/218 (69%), Gaps = 3/218 (1%) Strand=Plus/Plus Query 44707 CGCCGATCATTTGCATGGTGCCGCCCTGGCTGACGATAATTTCCGTCGTGTAACGTTCTA 44766 |||| | || |||||||| || | | ||| | ||||| || |||||||| | | Sbjct 186 CGCCCAGCAACTGCATGGTTCCTTGCATGTCGACTACGATTTCAGTGGTGTAACGCTTGA 245 Query 44767 CACCGGCGTCATCTGTCCACTTACGGGTTTTAAGTTTCCCTTCGATGTAGACCTGAGAAC 44826 ||| | | || ||||| ||||||| || || ||||||||||||||||| |||| Sbjct 246 TGCCGTCTTTTTC---CCACTCGCGGGTTTGCAGCTTGCCTTCGATGTAGACCTGCGAAC 302 Query 44827 CTTTTCGTAAATACTCACTCGCAATTTCAGCAAGTTTTCCGAACAAAACGACTTTATGCC 44886 |||| || | ||||||| || || || |||| || |||||||| || |||| Sbjct 303 CTTTGCGCAGGTACTCACCAGCGATCTCTGCAACCTTGCCGAACAACGACACGCGGTGCC 362 Query 44887 ATTCTGTTTGCTCTTTCTGTTGGCCCGTTTGCTTGTCG 44924 | || |||| |||||| | | | || ||||||||| Sbjct 363 ACTCGGTTTTCTCTTTGCGCTCGTTGGTCTGCTTGTCG 400 >seq2799564 Length=235 Score = 84.2 bits (92), Expect = 1e-11 Identities = 103/141 (73%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 44783 CCACTTACGGGTTTTAAGTTTCCCTTCGATGTAGACCTGAGAACCTTTTCGTAAATACTC 44842 ||||| ||||||| ||||| ||||||||||| ||||| |||||||| || | ||||| Sbjct 205 CCACTCGCGGGTTTGCAGTTTGCCTTCGATGTAAACCTGCGAACCTTTGCGCAGGTACTC 146 Query 44843 ACTCGCAATTTCAGCAAGTTTTCCGAACAAAACGACTTTATGCCATTCTGTTTGCTCTTT 44902 | || || || |||| || ||||||| || |||||||| |||| ||| Sbjct 145 GCCGGCGATCTCTGCAACCTTGCCGAACATCGACACGCGGTGCCATTCGGTTTTCTCGAC 86 Query 44903 CTGTTGGCCCGTTTGCTTGTC 44923 || ||||| || |||||||| Sbjct 85 CTTCTGGCCGGTCTGCTTGTC 65 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318443747829826