Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09] 3,088,511 sequences; 2,785,377,831 total letters Query= NC_031281.1 Length=43516 Score E Sequences producing significant alignments: (Bits) Value seq3088379 84.2 6e-12 >seq3088379 Length=10556 Score = 84.2 bits (92), Expect = 6e-12 Identities = 97/127 (76%), Gaps = 4/127 (3%) Strand=Plus/Plus Query 4842 ATGCTCGGCC-GCAAGCCG-CTGACCATCCGCAACCTGGTGGCGAACCGCCGCACCACCT 4899 |||| ||||| || |||| ||||||||||| ||||| ||||| | | ||||| || | Sbjct 4470 ATGCCCGGCCTGC--GCCGGCTGACCATCCGTGACCTGCTGGCGCAAGGTCGCACGACTT 4527 Query 4900 CGGACGCGGTCGAGTTCGTGCGCGAGACCTCGCACACCAACAACGCCGCACCCGTGGCCG 4959 | ||||| |||||| ||||||||||| | || ||||| |||||| || || |||| Sbjct 4528 CCGACGCCATCGAGTACGTGCGCGAGAACGTATTCATCAACAGCGCCGCTCCGGTCGCCG 4587 Query 4960 AGGCCAC 4966 ||| ||| Sbjct 4588 AGGGCAC 4594 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 134026873312196