Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09]
3,088,511 sequences; 2,785,377,831 total letters
Query= NC_031925.1
Length=43788
Score E
Sequences producing significant alignments: (Bits) Value
seq274481 84.2 6e-12
seq335145 82.4 2e-11
>seq274481
Length=3169
Score = 84.2 bits (92), Expect = 6e-12
Identities = 164/236 (69%), Gaps = 16/236 (7%)
Strand=Plus/Plus
Query 7567 CCTGACCACATCCGGGGTGTCGAACATATCCACCAGCTCGGCTACCGCGTGCCAGACATA 7626
||||| || |||||| |||||| | ||||||||||||| | |||| | | || |
Sbjct 1228 CCTGATCATATCCGGCGTGTCGTAGCCATCCACCAGCTCGTCAGCCGCCCGG--GGCAAA 1285
Query 7627 C--TCACGCTGAACGTATACGGTGCTAGCC---ATATGCCCGACGTTGAAGTCCTGACCG 7681
| || |||| |||| |||| ||||| || | ||||||||||||||| |||
Sbjct 1286 CCGTCTCGCTTGACGTG---GGTGATAGCCGCCATCTTGCCGACGTTGAAGTCCATCCCG 1342
Query 7682 ATATACAGCGTTTCCCCAGGTTGTATAGTCTC--TCGACTG-CTGTTCTTGCGTCGGTCG 7738
||| |||| | ||| ||||| || | ||| || |||| ||| |||| ||||||
Sbjct 1343 ATAAACAGGGGTTCGCCAGGCTGCACAGTGTCGAAGCACTGATTGTGCTTG---CGGTCG 1399
Query 7739 TAAGCATAATACACGCTGCCGGATGTCAGGTTGACAAATTCACCATCGATGTAGGC 7794
|| | | || | ||| |||||||||||||| || | ||| | || ||||||
Sbjct 1400 TACGAGTGGTAGATCGAGCCCGATGTCAGGTTGACGAACTGACCGTTGAGGTAGGC 1455
>seq335145
Length=573
Score = 82.4 bits (90), Expect = 2e-11
Identities = 74/93 (80%), Gaps = 0/93 (0%)
Strand=Plus/Minus
Query 58 CACCGCCGCCGTTGCCGCGGGACGCTTCGCGCTCGTATTCCAGCGGCATCTCAGGATTGC 117
||||||||||||| |||| | | || ||||| || | ||||| || ||| |||
Sbjct 477 CACCGCCGCCGTTACCGCCGCCTGGTTTACGCTCCAGCTCTACCGGCACCTTGGGAGTGC 418
Query 118 CTTCGCCGTAACCGATAGCACCCTGGCCGAAGA 150
||||||||||||||| |||||||||||||||||
Sbjct 417 CTTCGCCGTAACCGAAAGCACCCTGGCCGAAGA 385
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 134865350462500
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |