Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09] 3,088,511 sequences; 2,785,377,831 total letters Query= NC_031946.1 Length=40443 Score E Sequences producing significant alignments: (Bits) Value seq268701 84.2 5e-12 >seq268701 Length=8118 Score = 84.2 bits (92), Expect = 5e-12 Identities = 93/124 (75%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 26729 GCAATTTGCCTTCAAGATAAACCTCAGAACCTTTTCGCAGATACTCGCTGGCAATTTCTG 26788 ||| ||||||||||| ||||||| |||||||| ||||| || || | ||| ||||||| Sbjct 7993 GCAGTTTGCCTTCAATGTAAACCTGCGAACCTTTGCGCAGGTATTCACCGGCGATTTCTG 8052 Query 26789 CCAGTTTCCCGCTCATTACCACACGGTGCCACTCCGTCTGCTCCTTTTGCTCTCCAGTTT 26848 ||| || ||| ||| |||||||||||| || || | ||| | || ||||| | Sbjct 8053 CCACCTTGCCGAACATCGACACACGGTGCCATTCGGTTTTCTCGACCTTCTGGCCAGTCT 8112 Query 26849 GCTT 26852 |||| Sbjct 8113 GCTT 8116 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 124553931095710