Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Capreolus_20capreolus_20[genbank_20GCA_5F000751575.1_202014-09-09]
3,088,511 sequences; 2,785,377,831 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq66256 145 2e-29
seq300236 141 2e-28
seq155098 141 2e-28
seq185925 138 2e-27
seq2767978 120 6e-22
seq2340502 111 3e-19
seq2709013 107 4e-18
seq2409662 107 4e-18
seq1887490 107 4e-18
seq136426 105 1e-17
seq2816575 100 6e-16
seq1559739 100 6e-16
seq52516 98.7 2e-15
seq2233619 96.9 7e-15
seq1715084 95.1 2e-14
seq317140 95.1 2e-14
seq84207 93.3 8e-14
seq998369 89.7 1e-12
seq354556 89.7 1e-12
seq320552 89.7 1e-12
seq305004 89.7 1e-12
seq197299 89.7 1e-12
seq166666 89.7 1e-12
seq151921 89.7 1e-12
seq1774339 86.0 1e-11
seq137578 86.0 1e-11
seq2278510 84.2 4e-11
seq1809803 84.2 4e-11
seq216292 84.2 4e-11
>seq66256
Length=6617
Score = 145 bits (160), Expect = 2e-29
Identities = 170/230 (74%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
||||| | ||| |||| ||||| || | || ||||| ||||||||||| |||| |
Sbjct 1643 CCACCCCTCAGATGAAGGACCAGGTGCAGGGTCTACTCTTTCTGGATGTTGTAATCAGAA 1584
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| ||||||||||| || || || || | ||||||||| | | || |||||| |||
Sbjct 1583 AGAGTGCGGCCATCTTCCAGCTGCTTGCTGGCAAAGATGAGCCTCTGCTGGTCAGGGGGA 1524
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
|| || ||||| || |||||||| || || ||| | ||||| ||||| | || ||
Sbjct 1523 ATGCCTTCCTTATCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCTACC 1464
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102
|| || ||||| ||||| || |||| ||||| ||||| || ||||||||
Sbjct 1463 TCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATTTGCATTTT 1414
>seq300236
Length=7644
Score = 141 bits (156), Expect = 2e-28
Identities = 170/231 (74%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
||||| | ||||| || ||||| || | ||| ||||| |||||||||||||||| |
Sbjct 7640 CCACCTCTGAGGCGGAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCAGAA 7581
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| ||||| ||||| || || |||||||| ||||||||||| | || ||||| ||
Sbjct 7580 AGGGTGCGCCCATCTTCCAGCTGTTTCCCCGCAAAGATCAACCTCTGCTGGTCTGGAGGG 7521
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
|| ||||| || ||||| ||||| | || || | || || ||||| | || ||
Sbjct 7520 ATGCCCTCTTTTTCTTGTATCTTCCCCTTGACATTCTCAATGGTGTCACTGGGCTCCACC 7461
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTTC 283103
|| |||||||| || ||||| || | ||||| || || ||||||||| ||
Sbjct 7460 TCCAGAGTGATGGTTTTACCAGTGAGGGTCTTTACAAAGATCTGCATTGTC 7410
>seq155098
Length=7669
Score = 141 bits (156), Expect = 2e-28
Identities = 170/231 (74%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||| | || | | || ||||| | ||| || ||||| ||| |||||||||
Sbjct 7210 ACCACCAAGAAGTCTCAACACTAGATGAAGAGTGGACTCCTTTTGAATGCTGTAGTCAGA 7269
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
| || || |||| || ||||| || || |||||||||| ||| |||||| ||
Sbjct 7270 CAAAGTACGTTCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTATTTGCTGGTCAGGAGG 7329
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||| || ||||| || |||||||| | ||||| | || || || ||||| | ||||||
Sbjct 7330 AATTCCTTCCTTATCCTGGATCTTGGTCTTTACATTTTCTATTGTATCCGAGGGTTCGAC 7389
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102
||||||||||| ||||| ||||||| ||||| || || |||||||| ||
Sbjct 7390 CTCGAGAGTGATGGTCTTCCCCGTCAGGGTCTTCACAAAAATCTGCATCTT 7440
>seq185925
Length=7279
Score = 138 bits (152), Expect = 2e-27
Identities = 169/231 (73%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||| | || | | || ||||| | ||| || ||||| |||||||||||||
Sbjct 289 ACCACCATGAAGTCTCAACACTAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGA 348
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
| || | ||||| || ||||| || || ||| ||||| | ||| |||||| ||
Sbjct 349 CAAAGTATGTCCATCTTCCAGTTGCTTGCCAGCACAGATCTGTCTTTGCTGGTCAGGAGG 408
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||| || ||||| || |||||||| || ||||| | || || || ||| | | ||||||
Sbjct 409 AATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCAAGGGTTCGAC 468
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102
|| |||||||| ||||| ||||||| ||||| | ||| |||||||| ||
Sbjct 469 CTCAAGAGTGATGGTCTTCCCCGTCAGGGTCTTCATGAAAATCTGCATCTT 519
>seq2767978
Length=220
Score = 120 bits (132), Expect = 6e-22
Identities = 112/141 (79%), Gaps = 1/141 (1%)
Strand=Plus/Plus
Query 301406 GCTTAAAGATAGCGATGCTTAAAATGGACCCCTATATCAACGTCGATCCGGGGACGATGA 301465
|||||||| | | ||||| || ||||||| || ||||||||||| ||||| || ||||
Sbjct 64 GCTTAAAGTCACC-ATGCTCAAGCTGGACCCGTACATCAACGTCGACCCGGGCACCATGA 122
Query 301466 GCCCGACTCAACATGGAGAAGTGTTCGTGACGGATGATGGTGCTGAAACCGATCTGGATC 301525
||||| || || || ||||||||||| ||| |||| || || || ||||| ||||| |
Sbjct 123 GCCCGTTCCAGCACGGTGAAGTGTTCGTCACGCATGACGGCGCCGAGACCGACCTGGACC 182
Query 301526 TGGGGCACTACGAACGTTTCA 301546
|||| |||||||| || ||||
Sbjct 183 TGGGCCACTACGAGCGGTTCA 203
>seq2340502
Length=142
Score = 111 bits (122), Expect = 3e-19
Identities = 102/129 (79%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 282911 TTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGAT 282970
||| |||||||||||||||| || ||||| ||||| || || |||||||| ||||||||
Sbjct 142 TTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGCTGTTTCCCTGCAAAGAT 83
Query 282971 CAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATC 283030
||| | || ||||| || || ||||| |||||||||||||| || || || | ||
Sbjct 82 CAACCTCTGCTGGTCTGGTGGGATGCCCTCTTTGTCTTGGATCTTGGCCTTGACATTCTC 23
Query 283031 GATAGTGTC 283039
||| |||||
Sbjct 22 GATGGTGTC 14
>seq2709013
Length=200
Score = 107 bits (118), Expect = 4e-18
Identities = 142/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| || | | || ||||| | | | || ||||| |||||||||||||
Sbjct 4 ACCACCACGAAGTCTCAACACTAGATGAAGAGGGGACTCCTTTTGAATGTTGTAGTCAGA 63
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
| || || ||||| || ||||| || || |||| ||||| | ||| |||||| ||
Sbjct 64 CAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAATGATCAGTCTTTGCTGGTCAGGAGG 123
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||| || ||||| | |||||||| || ||||| | || || || || || | ||| |
Sbjct 124 AATTCCTTCCTTACCCTGGATCTTGGCCTTTACATTTTCTATTGTATCTGAGGGTTCAAG 183
Query 283052 TTCGAGAGTGATCGTCT 283068
||||||||||| ||||
Sbjct 184 CTCGAGAGTGATGGTCT 200
>seq2409662
Length=152
Score = 107 bits (118), Expect = 4e-18
Identities = 115/152 (76%), Gaps = 0/152 (0%)
Strand=Plus/Plus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
||||| | ||| ||||| ||||| || | || ||||| ||||||||||| |||| |
Sbjct 1 CCACCCCTCAGACGAAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAA 60
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| ||||||||||| || || || || ||||||||||| | | || |||||| |||
Sbjct 61 AGAGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCAGGGGGA 120
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTAC 283024
|| || ||||| || |||||||| || || ||
Sbjct 121 ATGCCTTCCTTATCCTGGATCTTGGCCTTCAC 152
>seq1887490
Length=127
Score = 107 bits (118), Expect = 4e-18
Identities = 100/127 (79%), Gaps = 0/127 (0%)
Strand=Plus/Minus
Query 282911 TTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGAT 282970
||| |||||||||||||||| || ||||| ||||| || || |||||||| ||||||||
Sbjct 127 TTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGCTGTTTCCCTGCAAAGAT 68
Query 282971 CAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATC 283030
||| | || ||||| || || ||||| |||||||||||||| || || || | ||
Sbjct 67 CAATCTCTGCTGGTCTGGGGGGATGCCCTCTTTGTCTTGGATCTTGGCCTTGACATTCTC 8
Query 283031 GATAGTG 283037
||| |||
Sbjct 7 GATGGTG 1
>seq136426
Length=23094
Score = 105 bits (116), Expect = 1e-17
Identities = 162/231 (70%), Gaps = 9/231 (4%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||| || | || ||| || |||| || | ||| ||||| ||||||||||||||||
Sbjct 21302 ACCTCCCCTCAAGCGCAGGACCAAGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCAGA 21243
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTC---ACC 282988
|| ||| | ||||| || || |||||||| ||||||||||| | || |||||
Sbjct 21242 CAGGGTGTGCCCATCTTCCAGCTGTTTCCCTGCAAAGATCAACCTCTGCTGGTCCGGGTG 21183
Query 282989 CGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTC 283048
|| | ||| ||||||||||| || || | | ||||| |||| | ||
Sbjct 21182 GGGGGTGCCC------TCTTGGATCTTGGCCTTGGCATTCTCGATGATGTCACTGGGCTC 21129
Query 283049 GACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| || || ||||| |||||||| ||||| ||||| | ||| ||||||||
Sbjct 21128 CACCTCCAGGGTGATGGTCTTACCAGTCAAGGTCTTCATGAAGATCTGCAT 21078
>seq2816575
Length=244
Score = 100 bits (110), Expect = 6e-16
Identities = 90/113 (80%), Gaps = 0/113 (0%)
Strand=Plus/Minus
Query 301434 CCCCTATATCAACGTCGATCCGGGGACGATGAGCCCGACTCAACATGGAGAAGTGTTCGT 301493
||| || |||||||| || ||||| || ||||||||| || || || |||||||||||
Sbjct 244 CCCGTACATCAACGTTGACCCGGGCACCATGAGCCCGTTCCAGCACGGTGAAGTGTTCGT 185
Query 301494 GACGGATGATGGTGCTGAAACCGATCTGGATCTGGGGCACTACGAACGTTTCA 301546
||| | || || ||||| ||||| ||||| ||||| |||||||| || ||||
Sbjct 184 CACGCACGACGGCGCTGAGACCGACCTGGACCTGGGCCACTACGAGCGGTTCA 132
>seq1559739
Length=125
Score = 100 bits (110), Expect = 6e-16
Identities = 97/125 (78%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971
|| |||||||||||||||| || ||||| ||||| || || |||||||| |||||||||
Sbjct 1 TTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGCTGTTTCCCTGCAAAGATC 60
Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031
| | || ||||| || || ||||| |||||||||||||| || || || | |||
Sbjct 61 AGCCTCTGCTGGTCTGGGGGGATGCCCTCTTTGTCTTGGATCTTGGCCTTGACATTCTCG 120
Query 283032 ATAGT 283036
|| ||
Sbjct 121 ATGGT 125
>seq52516
Length=9516
Score = 98.7 bits (108), Expect = 2e-15
Identities = 57/59 (97%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811
|||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct 5557 TTAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTCCCCGA 5499
>seq2233619
Length=130
Score = 96.9 bits (106), Expect = 7e-15
Identities = 89/113 (79%), Gaps = 0/113 (0%)
Strand=Plus/Plus
Query 301434 CCCCTATATCAACGTCGATCCGGGGACGATGAGCCCGACTCAACATGGAGAAGTGTTCGT 301493
||| || |||||||| || ||||| || ||||||||| || || || |||||||||||
Sbjct 1 CCCGTACATCAACGTTGACCCGGGCACCATGAGCCCGTTCCAGCACGGTGAAGTGTTCGT 60
Query 301494 GACGGATGATGGTGCTGAAACCGATCTGGATCTGGGGCACTACGAACGTTTCA 301546
|| | || || || |||||||| ||||| ||||| |||||||| || ||||
Sbjct 61 CACCCACGACGGCGCCGAAACCGACCTGGACCTGGGCCACTACGAGCGGTTCA 113
>seq1715084
Length=127
Score = 95.1 bits (104), Expect = 2e-14
Identities = 91/117 (78%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 282923 GTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTG 282982
|||||||| || ||||| ||||| || || |||||||| ||||||||||| | || ||
Sbjct 127 GTAGTCAGACAGGGTGCGCCCATCTTCCAGCTGTTTCCCCGCAAAGATCAACCTCTGCTG 68
Query 282983 GTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTC 283039
||| || || ||||| |||||||||||||| || || || | ||||| |||||
Sbjct 67 GTCCGGGGGGATGCCCTCTTTGTCTTGGATCTTGGCCTTGACATTCTCGATGGTGTC 11
>seq317140
Length=4972
Score = 95.1 bits (104), Expect = 2e-14
Identities = 161/230 (70%), Gaps = 5/230 (2%)
Strand=Plus/Minus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
|| || ||||| ||||| |||| || | ||| ||||| ||||| |||||||| |
Sbjct 4452 CCGCCTCGCAGACGAAGCACCATGTGCAGGGTGGACTCTTTCTGGATATTGTAGTCTGAC 4393
Query 282933 AGCGTGCGGCCATCCTCTAGTTG--TTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCG 282990
| ||| ||||| ||| || || | | || || | |||| || |||||||| ||
Sbjct 4392 GGAGTGTAGCCATGCTCCAGCTGCGTGTGCCCGCGACAATCAGCCGCGGTTGGTCAGGCG 4333
Query 282991 GAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTC-CGAAGCTTCG 283049
| || ||||||||||||||||| || ||||| || | || | ||||| | ||| |
Sbjct 4332 GGATGCCCTCCTTGTCTTGGATTTTGGCTTTGACATTCTCAGTGGTGTCACTGGGCTCC- 4274
Query 283050 ACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
| || || || || ||||| ||| ||| ||||| || | ||||||||
Sbjct 4273 -CCTCAAGGGTAATTGTCTTGCCCATCAGGGTCTTCACAGAGATCTGCAT 4225
>seq84207
Length=16436
Score = 93.3 bits (102), Expect = 8e-14
Identities = 133/186 (72%), Gaps = 6/186 (3%)
Strand=Plus/Minus
Query 282913 TTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCA 282972
|||| ||||||||||||| | || | ||||| || ||||| || || |||||||
Sbjct 213 TTTGAATGTTGTAGTCAGACAAAGTACATCCATCTTCCAGTTGCTTGCCAGCAAAGACTG 154
Query 282973 AACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGA 283032
| | ||| |||||| ||||| |||| || |||||||| || ||||| | ||
Sbjct 153 ATCTTTGCTGGTCAGGAGGAAT----TCCT--TCCTGGATCTTGGCCTTTACATTTTCTG 100
Query 283033 TAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATA 283092
| || | ||| | | ||| | ||| ||||| ||||| ||||||| ||||| || || |
Sbjct 99 TGGTATTCGAGGGCTTGACCTTGAGTGTGATGGTCTTCCCCGTCAGGGTCTTCACAAAAA 40
Query 283093 TCTGCA 283098
||||||
Sbjct 39 TCTGCA 34
>seq998369
Length=114
Score = 89.7 bits (98), Expect = 1e-12
Identities = 88/114 (77%), Gaps = 0/114 (0%)
Strand=Plus/Plus
Query 282923 GTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTG 282982
|||||||| || ||||| ||||| || || |||||||| ||||||||||| | || ||
Sbjct 1 GTAGTCAGACAGGGTGCGCCCATCTTCCAGCTGTTTCCCCGCAAAGATCAACCTCTGCTG 60
Query 282983 GTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGT 283036
||| || || ||||| |||||||||||||| || || || | ||||| ||
Sbjct 61 GTCTGGGGGGATGCCCTCTTTGTCTTGGATCTTGGCCTTGACATTCTCGATGGT 114
>seq354556
Length=2777
Score = 89.7 bits (98), Expect = 1e-12
Identities = 55/59 (93%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811
||||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct 2045 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 2103
>seq320552
Length=16403
Score = 89.7 bits (98), Expect = 1e-12
Identities = 55/59 (93%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811
||||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct 13679 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 13737
>seq305004
Length=8776
Score = 89.7 bits (98), Expect = 1e-12
Identities = 55/59 (93%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811
||||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct 2827 TTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 2885
Score = 89.7 bits (98), Expect = 1e-12
Identities = 55/59 (93%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811
||||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct 5710 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 5768
>seq197299
Length=26544
Score = 89.7 bits (98), Expect = 1e-12
Identities = 55/59 (93%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811
||||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct 3903 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 3961
>seq166666
Length=4101
Score = 89.7 bits (98), Expect = 1e-12
Identities = 55/59 (93%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811
||||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct 639 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 697
>seq151921
Length=25545
Score = 89.7 bits (98), Expect = 1e-12
Identities = 55/59 (93%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811
||||||||||||| |||||||| ||||||||||| |||||||||||||| |||||||||
Sbjct 21576 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 21634
>seq1774339
Length=127
Score = 86.0 bits (94), Expect = 1e-11
Identities = 85/110 (77%), Gaps = 0/110 (0%)
Strand=Plus/Minus
Query 282990 GGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCG 283049
|| || ||||| |||||||||||||| || || || | ||||| ||||| | ||
Sbjct 126 GGGATGCCCTCTTTGTCTTGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCC 67
Query 283050 ACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||||| || ||||| |||||||| |||| ||||| ||||| ||||||||
Sbjct 66 ACTTCCAGGGTGATGGTCTTACCGGTCAGCGTCTTCACGAAGATCTGCAT 17
>seq137578
Length=33193
Score = 86.0 bits (94), Expect = 1e-11
Identities = 127/178 (71%), Gaps = 4/178 (2%)
Strand=Plus/Minus
Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968
|| ||||| |||||||||||| ||| | | ||||| || ||||| || || ||||||
Sbjct 12951 TCCTTTTGCATGTTGTAGTCA--AAG--TACATCCATCGTCCAGTTGCTTGCCAGCAAAG 12896
Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028
||| | ||| || || ||||| || || || ||||||||||| || ||||| |
Sbjct 12895 GTCAGTCTTTGCTGATCGGAAGGAATTCCTTCGTTCTCTTGGATCTTGGCCTTTACATTT 12836
Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAA 283086
|| || | || || | || ||||| | ||||||| | ||| | |||| |||| ||
Sbjct 12835 TCTATTGCATCTGAGGGTTTGACTTTGGGAGTGATGGACTTCCTTGTCAGGGTCTCAA 12778
>seq2278510
Length=135
Score = 84.2 bits (92), Expect = 4e-11
Identities = 88/116 (76%), Gaps = 0/116 (0%)
Strand=Plus/Plus
Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968
|| ||||| ||||||||||||| | || | ||||| || ||||| || || ||||||
Sbjct 9 TCCTTTTGAATGTTGTAGTCAGACAAAGTATGTCCATCTTCCAGTTGCTTGCCAGCAAAG 68
Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTAC 283024
||| | ||| |||||| ||||| || ||||| || |||||||| || |||||
Sbjct 69 ATCTGTCTTTGCTGGTCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTTTAC 124
>seq1809803
Length=127
Score = 84.2 bits (92), Expect = 4e-11
Identities = 88/116 (76%), Gaps = 0/116 (0%)
Strand=Plus/Plus
Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968
|| ||||| ||||||||||||| | || | ||||| || ||||| || || | ||||
Sbjct 9 TCCTTTTGAATGTTGTAGTCAGACAAAGTATGTCCATCTTCCAGTTGCTTGCCAGAAAAG 68
Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTAC 283024
|||| | ||| |||||| ||||| || ||||| || |||||||| || |||||
Sbjct 69 ATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTTTAC 124
>seq216292
Length=14058
Score = 84.2 bits (92), Expect = 4e-11
Identities = 52/56 (93%), Gaps = 0/56 (0%)
Strand=Plus/Plus
Query 168752 ATTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCC 168807
|||||||||| ||| ||||||||||||||||| || ||||||||||||||||||||
Sbjct 7643 ATTAGTATAGCGGTGAGTATCCCTGCCTGTCATGCGGGAGACCGGGGTTCAATTCC 7698
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1005318110354194
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |